RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-209ENST00000542896 TTC5Q8N0Z6 440 aa35■■■■□ 3.19
PDCD2-209ENST00000542896 ADAMTS7Q9UKP4 1686 aa35■■■■□ 3.19
PDCD2-209ENST00000542896 BRCA1P38398 1863 aaKnown RBP34.99■■■■□ 3.19
PDCD2-209ENST00000542896 NPC1L1Q9UHC9 1359 aa34.99■■■■□ 3.19
PDCD2-209ENST00000542896 NFIXQ14938 502 aa34.98■■■■□ 3.19
PDCD2-209ENST00000542896 TOMM70O94826 608 aa34.97■■■■□ 3.19
PDCD2-209ENST00000542896 CANXP27824 592 aaKnown RBP34.97■■■■□ 3.19
PDCD2-209ENST00000542896 GAS2L2Q8NHY3 880 aa34.96■■■■□ 3.19
PDCD2-209ENST00000542896 NMRK2Q9NPI5 230 aa34.96■■■■□ 3.19
PDCD2-209ENST00000542896 TEFQ10587 303 aa34.95■■■■□ 3.19
PDCD2-209ENST00000542896 COL3A1P02461 1466 aaPredicted RBP34.95■■■■□ 3.19
PDCD2-209ENST00000542896 GNAT3A8MTJ3 354 aa34.94■■■■□ 3.18
PDCD2-209ENST00000542896 STARD3NLO95772 234 aa34.94■■■■□ 3.18
PDCD2-209ENST00000542896 BCL2L12Q9HB09 334 aa34.94■■■■□ 3.18
PDCD2-209ENST00000542896 RNF181Q9P0P0 153 aa34.93■■■■□ 3.18
PDCD2-209ENST00000542896 CEP350Q5VT06 3117 aa34.92■■■■□ 3.18
PDCD2-209ENST00000542896 ARFGEF1Q9Y6D6 1849 aa34.92■■■■□ 3.18
PDCD2-209ENST00000542896 SERPINB2P05120 415 aa34.92■■■■□ 3.18
PDCD2-209ENST00000542896 IL17REQ8NFR9 667 aa34.91■■■■□ 3.18
PDCD2-209ENST00000542896 ZNF790Q6PG37 636 aa34.89■■■■□ 3.18
PDCD2-209ENST00000542896 ZNF496Q96IT1 587 aaPredicted RBP34.89■■■■□ 3.18
PDCD2-209ENST00000542896 VIRMAQ69YN4 1812 aaKnown RBP34.89■■■■□ 3.18
PDCD2-209ENST00000542896 A0A087WZG4 1122 aa34.88■■■■□ 3.17
PDCD2-209ENST00000542896 APLP1P51693 650 aa34.88■■■■□ 3.17
PDCD2-209ENST00000542896 EIF5P55010 431 aaKnown RBP34.87■■■■□ 3.17
PDCD2-209ENST00000542896 BICDL1Q6ZP65 573 aa34.87■■■■□ 3.17
PDCD2-209ENST00000542896 C16orf71Q8IYS4 520 aaPredicted RBP34.87■■■■□ 3.17
PDCD2-209ENST00000542896 TEX13AQ9BXU3 409 aaPredicted RBP34.87■■■■□ 3.17
PDCD2-209ENST00000542896 HEG1Q9ULI3 1381 aa34.87■■■■□ 3.17
PDCD2-209ENST00000542896 KDM2BQ8NHM5 1336 aa34.86■■■■□ 3.17
PDCD2-209ENST00000542896 CFAP53Q96M91 514 aa34.86■■■■□ 3.17
PDCD2-209ENST00000542896 UBR2Q8IWV8 1755 aa34.85■■■■□ 3.17
PDCD2-209ENST00000542896 ZNF330Q9Y3S2 320 aaPredicted RBP34.84■■■■□ 3.17
PDCD2-209ENST00000542896 C2CD5Q86YS7 1000 aa34.83■■■■□ 3.17
PDCD2-209ENST00000542896 PRKAR2BP31323 418 aa34.82■■■■□ 3.16
PDCD2-209ENST00000542896 RASSF7Q02833 373 aa34.82■■■■□ 3.16
PDCD2-209ENST00000542896 RBM46Q8TBY0 533 aaKnown RBP34.82■■■■□ 3.16
PDCD2-209ENST00000542896 FMNL2Q96PY5 1086 aa34.82■■■■□ 3.16
PDCD2-209ENST00000542896 TTLL6Q8N841 843 aa34.81■■■■□ 3.16
PDCD2-209ENST00000542896 NRXN2Q9P2S2 1712 aa34.81■■■■□ 3.16
PDCD2-209ENST00000542896 H0YIN7 160 aa34.8■■■■□ 3.16
PDCD2-209ENST00000542896 AFDNP55196 1824 aaKnown RBP34.8■■■■□ 3.16
PDCD2-209ENST00000542896 IFFO2Q5TF58 517 aa34.79■■■■□ 3.16
PDCD2-209ENST00000542896 TBC1D9BQ66K14 1250 aa34.79■■■■□ 3.16
PDCD2-209ENST00000542896 NPM2Q86SE8 214 aaKnown RBP34.79■■■■□ 3.16
PDCD2-209ENST00000542896 PHACTR3Q96KR7 559 aa34.79■■■■□ 3.16
PDCD2-209ENST00000542896 TBC1D2BQ9UPU7 963 aa34.79■■■■□ 3.16
PDCD2-209ENST00000542896 NUDCQ9Y266 331 aa34.79■■■■□ 3.16
PDCD2-209ENST00000542896 CARMIL3Q8ND23 1372 aa34.78■■■■□ 3.16
PDCD2-209ENST00000542896 IL6STP40189 918 aaPredicted RBP34.78■■■■□ 3.16
PDCD2-209ENST00000542896 RSPH6AQ9H0K4 717 aa34.78■■■■□ 3.16
PDCD2-209ENST00000542896 RRAGCQ9HB90 399 aa34.78■■■■□ 3.16
PDCD2-209ENST00000542896 CEMIPQ8WUJ3 1361 aa34.77■■■■□ 3.16
PDCD2-209ENST00000542896 BTBD11A6QL63 1104 aa34.77■■■■□ 3.16
PDCD2-209ENST00000542896 A1BGP04217 495 aa34.75■■■■□ 3.15
PDCD2-209ENST00000542896 LMNB1P20700 586 aa34.74■■■■□ 3.15
PDCD2-209ENST00000542896 ZC3H4Q9UPT8 1303 aaKnown RBP34.74■■■■□ 3.15
PDCD2-209ENST00000542896 KCNQ3O43525 872 aa34.73■■■■□ 3.15
PDCD2-209ENST00000542896 FSTL1Q12841 308 aa34.73■■■■□ 3.15
PDCD2-209ENST00000542896 U2AF1L5P0DN76 240 aaPredicted RBP34.72■■■■□ 3.15
PDCD2-209ENST00000542896 U2AF1Q01081 240 aaKnown RBP eCLIP34.72■■■■□ 3.15
PDCD2-209ENST00000542896 PDE6BP35913 854 aa34.71■■■■□ 3.15
PDCD2-209ENST00000542896 ZNF622Q969S3 477 aaKnown RBP eCLIP34.71■■■■□ 3.15
PDCD2-209ENST00000542896 BRIP1Q9BX63 1249 aa34.71■■■■□ 3.15
PDCD2-209ENST00000542896 PDZRN3Q9UPQ7 1066 aa34.71■■■■□ 3.15
PDCD2-209ENST00000542896 SIPA1L3O60292 1781 aaPredicted RBP34.7■■■■□ 3.15
PDCD2-209ENST00000542896 PRR5LQ6MZQ0 368 aa34.7■■■■□ 3.15
PDCD2-209ENST00000542896 CCDC24Q8N4L8 307 aa34.7■■■■□ 3.15
PDCD2-209ENST00000542896 RTF1Q92541 710 aaKnown RBP34.7■■■■□ 3.15
PDCD2-209ENST00000542896 PPP2R1AP30153 589 aa34.69■■■■□ 3.14
PDCD2-209ENST00000542896 DNAJC5GQ8N7S2 189 aa34.69■■■■□ 3.14
PDCD2-209ENST00000542896 NPHP1O15259 732 aa34.68■■■■□ 3.14
PDCD2-209ENST00000542896 PRELPP51888 382 aa34.68■■■■□ 3.14
PDCD2-209ENST00000542896 SETDB2Q96T68 719 aa34.68■■■■□ 3.14
PDCD2-209ENST00000542896 DLEC1Q9Y238 1755 aa34.68■■■■□ 3.14
PDCD2-209ENST00000542896 SBF1O95248 1867 aa34.67■■■■□ 3.14
PDCD2-209ENST00000542896 SCN7AQ01118 1682 aa34.67■■■■□ 3.14
PDCD2-209ENST00000542896 CAMTA2O94983 1202 aa34.67■■■■□ 3.14
PDCD2-209ENST00000542896 NFKBIEO00221 500 aa34.66■■■■□ 3.14
PDCD2-209ENST00000542896 DZIP3Q86Y13 1208 aaKnown RBP34.66■■■■□ 3.14
PDCD2-209ENST00000542896 USP16Q9Y5T5 823 aa34.66■■■■□ 3.14
PDCD2-209ENST00000542896 GLTPD2A6NH11 291 aa34.65■■■■□ 3.14
PDCD2-209ENST00000542896 MCM10Q7L590 875 aa34.65■■■■□ 3.14
PDCD2-209ENST00000542896 CNBD1Q8NA66 436 aa34.65■■■■□ 3.14
PDCD2-209ENST00000542896 ZNF219Q9P2Y4 722 aaPredicted RBP34.65■■■■□ 3.14
PDCD2-209ENST00000542896 TNRC6CQ9HCJ0 1690 aaKnown RBP34.63■■■■□ 3.13
PDCD2-209ENST00000542896 PIP4K2AP48426 406 aaPredicted RBP34.63■■■■□ 3.13
PDCD2-209ENST00000542896 SMC1BQ8NDV3 1235 aa34.63■■■■□ 3.13
PDCD2-209ENST00000542896 C21orf2O43822 256 aa34.62■■■■□ 3.13
PDCD2-209ENST00000542896 SNRPA1P09661 255 aaKnown RBP34.62■■■■□ 3.13
PDCD2-209ENST00000542896 ST5P78524 1137 aa34.62■■■■□ 3.13
PDCD2-209ENST00000542896 PRAMEF22A3QJZ6 481 aa34.61■■■■□ 3.13
PDCD2-209ENST00000542896 HTRA3P83110 453 aa34.61■■■■□ 3.13
PDCD2-209ENST00000542896 VEGFAP15692 232 aaPredicted RBP34.6■■■■□ 3.13
PDCD2-209ENST00000542896 DCTN1Q14203 1278 aa34.59■■■■□ 3.13
PDCD2-209ENST00000542896 WDR90Q96KV7 1748 aa34.58■■■■□ 3.13
PDCD2-209ENST00000542896 ANKRD31Q8N7Z5 1873 aa34.57■■■■□ 3.12
PDCD2-209ENST00000542896 HTATSF1O43719 755 aaKnown RBP34.57■■■■□ 3.12
PDCD2-209ENST00000542896 CNKSR1Q969H4 720 aa34.57■■■■□ 3.12
PDCD2-209ENST00000542896 DPY19L2Q6NUT2 758 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms