RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 GMCL1Q96IK5 515 aa7.78□□□□□ -1.16
LEMD3-204ENST00000542032 KRTAP4-2Q9BYR5 136 aa7.78□□□□□ -1.16
LEMD3-204ENST00000542032 ARID1BQ8NFD5 2236 aaPredicted RBP7.78□□□□□ -1.16
LEMD3-204ENST00000542032 USP17L3A6NCW0 530 aa7.77□□□□□ -1.17
LEMD3-204ENST00000542032 USP17L4A6NCW7 530 aa7.77□□□□□ -1.17
LEMD3-204ENST00000542032 GTF2IP78347 998 aa7.77□□□□□ -1.17
LEMD3-204ENST00000542032 C4orf17Q53FE4 359 aa7.77□□□□□ -1.17
LEMD3-204ENST00000542032 USP17L2Q6R6M4 530 aa7.77□□□□□ -1.17
LEMD3-204ENST00000542032 USP17L1Q7RTZ2 530 aa7.77□□□□□ -1.17
LEMD3-204ENST00000542032 TRIM22Q8IYM9 498 aa7.77□□□□□ -1.17
LEMD3-204ENST00000542032 DEPDC4Q8N2C3 294 aa7.77□□□□□ -1.17
LEMD3-204ENST00000542032 ZBTB7BO15156 539 aaPredicted RBP7.76□□□□□ -1.17
LEMD3-204ENST00000542032 SMTNP53814 917 aa7.76□□□□□ -1.17
LEMD3-204ENST00000542032 TLR1Q15399 786 aa7.76□□□□□ -1.17
LEMD3-204ENST00000542032 DBN1Q16643 649 aa7.76□□□□□ -1.17
LEMD3-204ENST00000542032 RHBDD1Q8TEB9 315 aa7.76□□□□□ -1.17
LEMD3-204ENST00000542032 ZNF837Q96EG3 531 aaPredicted RBP7.76□□□□□ -1.17
LEMD3-204ENST00000542032 TIMMDC1Q9NPL8 285 aa7.76□□□□□ -1.17
LEMD3-204ENST00000542032 IQSEC3Q9UPP2 1182 aaPredicted RBP7.76□□□□□ -1.17
LEMD3-204ENST00000542032 OIP5O43482 229 aa7.75□□□□□ -1.17
LEMD3-204ENST00000542032 F11P03951 625 aa7.75□□□□□ -1.17
LEMD3-204ENST00000542032 THBS1P07996 1170 aa7.75□□□□□ -1.17
LEMD3-204ENST00000542032 CHRNA4P43681 627 aa7.75□□□□□ -1.17
LEMD3-204ENST00000542032 SUV39H2Q9H5I1 410 aa7.75□□□□□ -1.17
LEMD3-204ENST00000542032 A0A1B0GTH6 734 aa7.74□□□□□ -1.17
LEMD3-204ENST00000542032 CLDN10P78369 228 aa7.74□□□□□ -1.17
LEMD3-204ENST00000542032 GNASQ5JWF2 1037 aa7.74□□□□□ -1.17
LEMD3-204ENST00000542032 TMEM214Q6NUQ4 689 aaKnown RBP7.74□□□□□ -1.17
LEMD3-204ENST00000542032 RRAGCQ9HB90 399 aa7.74□□□□□ -1.17
LEMD3-204ENST00000542032 LRRC4BQ9NT99 713 aa7.74□□□□□ -1.17
LEMD3-204ENST00000542032 KIAA1024Q9UPX6 916 aa7.74□□□□□ -1.17
LEMD3-204ENST00000542032 MAFBQ9Y5Q3 323 aaPredicted RBP7.74□□□□□ -1.17
LEMD3-204ENST00000542032 A6NJY4 79 aa7.73□□□□□ -1.17
LEMD3-204ENST00000542032 H7C1W4 665 aa7.73□□□□□ -1.17
LEMD3-204ENST00000542032 CDK2AP1O14519 115 aa7.73□□□□□ -1.17
LEMD3-204ENST00000542032 DKK1O94907 266 aa7.73□□□□□ -1.17
LEMD3-204ENST00000542032 EPHA4P54764 986 aa7.73□□□□□ -1.17
LEMD3-204ENST00000542032 UBAP2LQ14157 1087 aaKnown RBP7.73□□□□□ -1.17
LEMD3-204ENST00000542032 TRIM50Q86XT4 487 aa7.73□□□□□ -1.17
LEMD3-204ENST00000542032 ZNF358Q9NW07 568 aa7.73□□□□□ -1.17
LEMD3-204ENST00000542032 TFIP11Q9UBB9 837 aaKnown RBP7.73□□□□□ -1.17
LEMD3-204ENST00000542032 PALM3A6NDB9 673 aaPredicted RBP7.72□□□□□ -1.17
LEMD3-204ENST00000542032 PHKA2P46019 1235 aa7.72□□□□□ -1.17
LEMD3-204ENST00000542032 ATP1A2P50993 1020 aa7.72□□□□□ -1.17
LEMD3-204ENST00000542032 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.72□□□□□ -1.17
LEMD3-204ENST00000542032 CALR3Q96L12 384 aaKnown RBP7.72□□□□□ -1.17
LEMD3-204ENST00000542032 GAS2L1Q99501 681 aaPredicted RBP7.72□□□□□ -1.17
LEMD3-204ENST00000542032 PPP1R12CQ9BZL4 782 aa7.72□□□□□ -1.17
LEMD3-204ENST00000542032 SERTAD1Q9UHV2 236 aa7.72□□□□□ -1.17
LEMD3-204ENST00000542032 USP3Q9Y6I4 520 aa7.72□□□□□ -1.17
LEMD3-204ENST00000542032 SHISA8B8ZZ34 492 aa7.71□□□□□ -1.18
LEMD3-204ENST00000542032 BACH1O14867 736 aa7.71□□□□□ -1.18
LEMD3-204ENST00000542032 GTF2E1P29083 439 aaPredicted RBP7.71□□□□□ -1.18
LEMD3-204ENST00000542032 RIPOR1Q6ZS17 1223 aa7.71□□□□□ -1.18
LEMD3-204ENST00000542032 LARGE2Q8N3Y3 721 aa7.71□□□□□ -1.18
LEMD3-204ENST00000542032 MKRN1Q9UHC7 482 aaKnown RBP7.71□□□□□ -1.18
LEMD3-204ENST00000542032 MSX1P28360 303 aa7.7□□□□□ -1.18
LEMD3-204ENST00000542032 LBRQ14739 615 aaKnown RBP7.7□□□□□ -1.18
LEMD3-204ENST00000542032 SIX5Q8N196 739 aa7.7□□□□□ -1.18
LEMD3-204ENST00000542032 OGFOD1Q8N543 542 aa7.7□□□□□ -1.18
LEMD3-204ENST00000542032 NIFKQ9BYG3 293 aaKnown RBP7.7□□□□□ -1.18
LEMD3-204ENST00000542032 CRISPLD1Q9H336 500 aa7.7□□□□□ -1.18
LEMD3-204ENST00000542032 SCHIP1Q9P0W5 487 aaPredicted RBP7.7□□□□□ -1.18
LEMD3-204ENST00000542032 M0R2N6 131 aa7.69□□□□□ -1.18
LEMD3-204ENST00000542032 KANK4Q5T7N3 995 aaPredicted RBP7.69□□□□□ -1.18
LEMD3-204ENST00000542032 CCDC102BQ68D86 513 aa7.69□□□□□ -1.18
LEMD3-204ENST00000542032 FOXR1Q6PIV2 292 aa7.69□□□□□ -1.18
LEMD3-204ENST00000542032 NUCKS1Q9H1E3 243 aaKnown RBP7.69□□□□□ -1.18
LEMD3-204ENST00000542032 DNAAF2Q9NVR5 837 aaKnown RBP7.69□□□□□ -1.18
LEMD3-204ENST00000542032 ATP4AP20648 1035 aa7.68□□□□□ -1.18
LEMD3-204ENST00000542032 PLA2G4AP47712 749 aa7.68□□□□□ -1.18
LEMD3-204ENST00000542032 PSME1Q06323 249 aa7.68□□□□□ -1.18
LEMD3-204ENST00000542032 TPCN2Q8NHX9 752 aa7.68□□□□□ -1.18
LEMD3-204ENST00000542032 C1orf216Q8TAB5 229 aa7.68□□□□□ -1.18
LEMD3-204ENST00000542032 GTPBP3Q969Y2 492 aaKnown RBP7.68□□□□□ -1.18
LEMD3-204ENST00000542032 ZNF777Q9ULD5 760 aaPredicted RBP7.68□□□□□ -1.18
LEMD3-204ENST00000542032 CFAP70Q5T0N1 1121 aa7.67□□□□□ -1.18
LEMD3-204ENST00000542032 POTEAQ6S8J7 498 aa7.67□□□□□ -1.18
LEMD3-204ENST00000542032 ZDHHC1Q8WTX9 485 aa7.67□□□□□ -1.18
LEMD3-204ENST00000542032 CFHR5Q9BXR6 569 aa7.67□□□□□ -1.18
LEMD3-204ENST00000542032 GPAMQ9HCL2 828 aa7.67□□□□□ -1.18
LEMD3-204ENST00000542032 GTF3C3Q9Y5Q9 886 aa7.67□□□□□ -1.18
LEMD3-204ENST00000542032 MX2P20592 715 aa7.66□□□□□ -1.18
LEMD3-204ENST00000542032 TEAD4Q15561 434 aa7.66□□□□□ -1.18
LEMD3-204ENST00000542032 RSPO4Q2I0M5 234 aaPredicted RBP7.66□□□□□ -1.18
LEMD3-204ENST00000542032 ZMYND15Q9H091 742 aa7.66□□□□□ -1.18
LEMD3-204ENST00000542032 NDFIP2Q9NV92 336 aa7.66□□□□□ -1.18
LEMD3-204ENST00000542032 ZDHHC3Q9NYG2 299 aa7.66□□□□□ -1.18
LEMD3-204ENST00000542032 YBX3P16989 372 aaKnown RBP eCLIP7.65□□□□□ -1.18
LEMD3-204ENST00000542032 PTK7Q13308 1070 aa7.65□□□□□ -1.18
LEMD3-204ENST00000542032 TNS4Q8IZW8 715 aa7.65□□□□□ -1.18
LEMD3-204ENST00000542032 TRERF1Q96PN7 1200 aa7.65□□□□□ -1.18
LEMD3-204ENST00000542032 OXCT2Q9BYC2 517 aaPredicted RBP7.65□□□□□ -1.18
LEMD3-204ENST00000542032 RUBCNLQ9H714 662 aa7.65□□□□□ -1.18
LEMD3-204ENST00000542032 FAM196BA6NMK8 535 aa7.64□□□□□ -1.19
LEMD3-204ENST00000542032 RASA1P20936 1047 aa7.64□□□□□ -1.19
LEMD3-204ENST00000542032 CRTC2Q53ET0 693 aaPredicted RBP7.64□□□□□ -1.19
LEMD3-204ENST00000542032 C1orf229Q6ZS94 237 aaPredicted RBP7.64□□□□□ -1.19
LEMD3-204ENST00000542032 NLRP8Q86W28 1048 aa7.64□□□□□ -1.19
LEMD3-204ENST00000542032 SLC9A9Q8IVB4 645 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms