RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 WDR90Q96KV7 1748 aa17.81■□□□□ 0.44
SCARB1-207ENST00000541661 KDM2BQ8NHM5 1336 aa17.8■□□□□ 0.44
SCARB1-207ENST00000541661 VSIG10Q8N0Z9 540 aa17.8■□□□□ 0.44
SCARB1-207ENST00000541661 RNF181Q9P0P0 153 aa17.8■□□□□ 0.44
SCARB1-207ENST00000541661 NARFQ9UHQ1 456 aa17.8■□□□□ 0.44
SCARB1-207ENST00000541661 FSTL1Q12841 308 aa17.79■□□□□ 0.44
SCARB1-207ENST00000541661 SLC39A6Q13433 755 aa17.79■□□□□ 0.44
SCARB1-207ENST00000541661 DLEC1Q9Y238 1755 aa17.79■□□□□ 0.44
SCARB1-207ENST00000541661 TNRC6CQ9HCJ0 1690 aaKnown RBP17.78■□□□□ 0.44
SCARB1-207ENST00000541661 NFIXQ14938 502 aa17.78■□□□□ 0.44
SCARB1-207ENST00000541661 C16orf71Q8IYS4 520 aaPredicted RBP17.78■□□□□ 0.44
SCARB1-207ENST00000541661 UBR2Q8IWV8 1755 aa17.78■□□□□ 0.44
SCARB1-207ENST00000541661 COL15A1P39059 1388 aa17.78■□□□□ 0.44
SCARB1-207ENST00000541661 HMOX1P09601 288 aa17.77■□□□□ 0.44
SCARB1-207ENST00000541661 MTHFSDQ2M296 383 aaKnown RBP17.77■□□□□ 0.44
SCARB1-207ENST00000541661 BCL2L12Q9HB09 334 aa17.77■□□□□ 0.44
SCARB1-207ENST00000541661 ZBTB1Q9Y2K1 713 aa17.77■□□□□ 0.44
SCARB1-207ENST00000541661 ZC3H4Q9UPT8 1303 aaKnown RBP17.76■□□□□ 0.43
SCARB1-207ENST00000541661 PER1O15534 1290 aaPredicted RBP17.76■□□□□ 0.43
SCARB1-207ENST00000541661 RRAGCQ9HB90 399 aa17.76■□□□□ 0.43
SCARB1-207ENST00000541661 DIAPH1O60610 1272 aaKnown RBP17.75■□□□□ 0.43
SCARB1-207ENST00000541661 SERPINB2P05120 415 aa17.75■□□□□ 0.43
SCARB1-207ENST00000541661 KIF7Q2M1P5 1343 aa17.73■□□□□ 0.43
SCARB1-207ENST00000541661 KLRG1Q96E93 195 aa17.73■□□□□ 0.43
SCARB1-207ENST00000541661 CCDC88AQ3V6T2 1871 aa17.72■□□□□ 0.43
SCARB1-207ENST00000541661 LMNB1P20700 586 aa17.72■□□□□ 0.43
SCARB1-207ENST00000541661 EIF5P55010 431 aaKnown RBP17.72■□□□□ 0.43
SCARB1-207ENST00000541661 RASSF7Q02833 373 aa17.72■□□□□ 0.43
SCARB1-207ENST00000541661 TTLL6Q8N841 843 aa17.72■□□□□ 0.43
SCARB1-207ENST00000541661 JMYQ8N9B5 988 aa17.72■□□□□ 0.43
SCARB1-207ENST00000541661 A0A087WZG4 1122 aa17.71■□□□□ 0.43
SCARB1-207ENST00000541661 STARD3NLO95772 234 aa17.71■□□□□ 0.43
SCARB1-207ENST00000541661 CANXP27824 592 aaKnown RBP17.71■□□□□ 0.43
SCARB1-207ENST00000541661 PRELPP51888 382 aa17.71■□□□□ 0.43
SCARB1-207ENST00000541661 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.43
SCARB1-207ENST00000541661 GLTPD2A6NH11 291 aa17.7■□□□□ 0.42
SCARB1-207ENST00000541661 HTRA3P83110 453 aa17.7■□□□□ 0.42
SCARB1-207ENST00000541661 C2CD5Q86YS7 1000 aa17.7■□□□□ 0.42
SCARB1-207ENST00000541661 SMC1BQ8NDV3 1235 aa17.7■□□□□ 0.42
SCARB1-207ENST00000541661 SIPA1L3O60292 1781 aaPredicted RBP17.7■□□□□ 0.42
SCARB1-207ENST00000541661 H0YIN7 160 aa17.69■□□□□ 0.42
SCARB1-207ENST00000541661 TTC5Q8N0Z6 440 aa17.69■□□□□ 0.42
SCARB1-207ENST00000541661 TEX13AQ9BXU3 409 aaPredicted RBP17.69■□□□□ 0.42
SCARB1-207ENST00000541661 ANKRD31Q8N7Z5 1873 aa17.69■□□□□ 0.42
SCARB1-207ENST00000541661 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
SCARB1-207ENST00000541661 CARMIL3Q8ND23 1372 aa17.68■□□□□ 0.42
SCARB1-207ENST00000541661 VEGFAP15692 232 aaPredicted RBP17.68■□□□□ 0.42
SCARB1-207ENST00000541661 CC2D1BQ5T0F9 858 aaKnown RBP17.68■□□□□ 0.42
SCARB1-207ENST00000541661 TIAM2Q8IVF5 1701 aa17.68■□□□□ 0.42
SCARB1-207ENST00000541661 IL17REQ8NFR9 667 aa17.68■□□□□ 0.42
SCARB1-207ENST00000541661 ZNF496Q96IT1 587 aaPredicted RBP17.68■□□□□ 0.42
SCARB1-207ENST00000541661 PDZRN3Q9UPQ7 1066 aa17.68■□□□□ 0.42
SCARB1-207ENST00000541661 SCN7AQ01118 1682 aa17.67■□□□□ 0.42
SCARB1-207ENST00000541661 NPC1L1Q9UHC9 1359 aa17.67■□□□□ 0.42
SCARB1-207ENST00000541661 HEG1Q9ULI3 1381 aa17.67■□□□□ 0.42
SCARB1-207ENST00000541661 GNAT3A8MTJ3 354 aa17.67■□□□□ 0.42
SCARB1-207ENST00000541661 NFKBIEO00221 500 aa17.67■□□□□ 0.42
SCARB1-207ENST00000541661 ZNF790Q6PG37 636 aa17.67■□□□□ 0.42
SCARB1-207ENST00000541661 TEFQ10587 303 aa17.66■□□□□ 0.42
SCARB1-207ENST00000541661 TBC1D9BQ66K14 1250 aa17.66■□□□□ 0.42
SCARB1-207ENST00000541661 GAS2L2Q8NHY3 880 aa17.66■□□□□ 0.42
SCARB1-207ENST00000541661 BRIP1Q9BX63 1249 aa17.66■□□□□ 0.42
SCARB1-207ENST00000541661 DICER1Q9UPY3 1922 aaKnown RBP17.66■□□□□ 0.42
SCARB1-207ENST00000541661 FER1L6Q2WGJ9 1857 aa17.65■□□□□ 0.42
SCARB1-207ENST00000541661 PCNTO95613 3336 aa17.65■□□□□ 0.42
SCARB1-207ENST00000541661 PDE6BP35913 854 aa17.65■□□□□ 0.42
SCARB1-207ENST00000541661 IL6STP40189 918 aaPredicted RBP17.65■□□□□ 0.42
SCARB1-207ENST00000541661 BICDL1Q6ZP65 573 aa17.65■□□□□ 0.42
SCARB1-207ENST00000541661 COL11A2P13942 1736 aaPredicted RBP17.64■□□□□ 0.41
SCARB1-207ENST00000541661 U2SURPO15042 1029 aaKnown RBP17.63■□□□□ 0.41
SCARB1-207ENST00000541661 PRR5LQ6MZQ0 368 aa17.63■□□□□ 0.41
SCARB1-207ENST00000541661 FMNL2Q96PY5 1086 aa17.63■□□□□ 0.41
SCARB1-207ENST00000541661 TBC1D2BQ9UPU7 963 aa17.63■□□□□ 0.41
SCARB1-207ENST00000541661 CEMIPQ8WUJ3 1361 aa17.63■□□□□ 0.41
SCARB1-207ENST00000541661 POTECB2RU33 542 aa17.62■□□□□ 0.41
SCARB1-207ENST00000541661 DPY19L2Q6NUT2 758 aa17.62■□□□□ 0.41
SCARB1-207ENST00000541661 ZNF622Q969S3 477 aaKnown RBP eCLIP17.62■□□□□ 0.41
SCARB1-207ENST00000541661 A1BGP04217 495 aa17.61■□□□□ 0.41
SCARB1-207ENST00000541661 LTBP3Q9NS15 1303 aa17.61■□□□□ 0.41
SCARB1-207ENST00000541661 C21orf2O43822 256 aa17.6■□□□□ 0.41
SCARB1-207ENST00000541661 CAMTA2O94983 1202 aa17.6■□□□□ 0.41
SCARB1-207ENST00000541661 COL13A1Q5TAT6 717 aaPredicted RBP17.6■□□□□ 0.41
SCARB1-207ENST00000541661 SETDB2Q96T68 719 aa17.6■□□□□ 0.41
SCARB1-207ENST00000541661 BCORQ6W2J9 1755 aa17.6■□□□□ 0.41
SCARB1-207ENST00000541661 ARFGEF2Q9Y6D5 1785 aa17.59■□□□□ 0.41
SCARB1-207ENST00000541661 CCDC24Q8N4L8 307 aa17.59■□□□□ 0.41
SCARB1-207ENST00000541661 ZNF330Q9Y3S2 320 aaPredicted RBP17.59■□□□□ 0.41
SCARB1-207ENST00000541661 SLX4Q8IY92 1834 aa17.58■□□□□ 0.41
SCARB1-207ENST00000541661 BTBD11A6QL63 1104 aa17.58■□□□□ 0.4
SCARB1-207ENST00000541661 ERFEQ4G0M1 354 aa17.58■□□□□ 0.4
SCARB1-207ENST00000541661 STYK1Q6J9G0 422 aa17.58■□□□□ 0.4
SCARB1-207ENST00000541661 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
SCARB1-207ENST00000541661 CNBD1Q8NA66 436 aa17.58■□□□□ 0.4
SCARB1-207ENST00000541661 CNKSR1Q969H4 720 aa17.58■□□□□ 0.4
SCARB1-207ENST00000541661 PHACTR3Q96KR7 559 aa17.58■□□□□ 0.4
SCARB1-207ENST00000541661 KCNQ3O43525 872 aa17.57■□□□□ 0.4
SCARB1-207ENST00000541661 SRGNP10124 158 aa17.57■□□□□ 0.4
SCARB1-207ENST00000541661 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
SCARB1-207ENST00000541661 ZNF219Q9P2Y4 722 aaPredicted RBP17.57■□□□□ 0.4
SCARB1-207ENST00000541661 CACNA1SQ13698 1873 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms