RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 FKBP8Q14318 412 aa26.72■■□□□ 1.87
ATN1-204ENST00000541029 MCM10Q7L590 875 aa26.7■■□□□ 1.86
ATN1-204ENST00000541029 PARP3Q9Y6F1 533 aa26.7■■□□□ 1.86
ATN1-204ENST00000541029 DDR1Q08345 913 aa26.69■■□□□ 1.86
ATN1-204ENST00000541029 BTBD11A6QL63 1104 aa26.68■■□□□ 1.86
ATN1-204ENST00000541029 KCNQ3O43525 872 aa26.68■■□□□ 1.86
ATN1-204ENST00000541029 DDX10Q13206 875 aaKnown RBP26.68■■□□□ 1.86
ATN1-204ENST00000541029 USPL1Q5W0Q7 1092 aa26.68■■□□□ 1.86
ATN1-204ENST00000541029 RTF1Q92541 710 aaKnown RBP26.68■■□□□ 1.86
ATN1-204ENST00000541029 KDM3BQ7LBC6 1761 aa26.68■■□□□ 1.86
ATN1-204ENST00000541029 NRXN2Q9P2S2 1712 aa26.68■■□□□ 1.86
ATN1-204ENST00000541029 LAMB4A4D0S4 1761 aa26.67■■□□□ 1.86
ATN1-204ENST00000541029 BCORQ6W2J9 1755 aa26.67■■□□□ 1.86
ATN1-204ENST00000541029 ZPR1O75312 459 aa26.67■■□□□ 1.86
ATN1-204ENST00000541029 CANXP27824 592 aaKnown RBP26.67■■□□□ 1.86
ATN1-204ENST00000541029 DCTN1Q14203 1278 aa26.67■■□□□ 1.86
ATN1-204ENST00000541029 STARD3NLO95772 234 aa26.66■■□□□ 1.86
ATN1-204ENST00000541029 FMNL2Q96PY5 1086 aa26.66■■□□□ 1.86
ATN1-204ENST00000541029 ARFGEF1Q9Y6D6 1849 aa26.66■■□□□ 1.86
ATN1-204ENST00000541029 NARFQ9UHQ1 456 aa26.65■■□□□ 1.86
ATN1-204ENST00000541029 RALBP1Q15311 655 aa26.64■■□□□ 1.86
ATN1-204ENST00000541029 DLEC1Q9Y238 1755 aa26.62■■□□□ 1.85
ATN1-204ENST00000541029 A0A0G2JLW4 131 aa26.62■■□□□ 1.85
ATN1-204ENST00000541029 POLRMTO00411 1230 aaKnown RBP26.62■■□□□ 1.85
ATN1-204ENST00000541029 TGFB2P61812 414 aa26.62■■□□□ 1.85
ATN1-204ENST00000541029 PLEKHF1Q96S99 279 aa26.62■■□□□ 1.85
ATN1-204ENST00000541029 TEX13AQ9BXU3 409 aaPredicted RBP26.62■■□□□ 1.85
ATN1-204ENST00000541029 HTATSF1O43719 755 aaKnown RBP26.61■■□□□ 1.85
ATN1-204ENST00000541029 NEFMP07197 916 aa26.61■■□□□ 1.85
ATN1-204ENST00000541029 EIF5P55010 431 aaKnown RBP26.61■■□□□ 1.85
ATN1-204ENST00000541029 BCL2L12Q9HB09 334 aa26.61■■□□□ 1.85
ATN1-204ENST00000541029 DPEP1P16444 411 aa26.6■■□□□ 1.85
ATN1-204ENST00000541029 TM4SF1P30408 202 aa26.6■■□□□ 1.85
ATN1-204ENST00000541029 NFIXQ14938 502 aa26.59■■□□□ 1.85
ATN1-204ENST00000541029 ZNF330Q9Y3S2 320 aaPredicted RBP26.59■■□□□ 1.85
ATN1-204ENST00000541029 MAPK8IP3Q9UPT6 1336 aa26.58■■□□□ 1.85
ATN1-204ENST00000541029 ANKRD31Q8N7Z5 1873 aa26.57■■□□□ 1.84
ATN1-204ENST00000541029 PRAMEF22A3QJZ6 481 aa26.57■■□□□ 1.84
ATN1-204ENST00000541029 A1BGP04217 495 aa26.57■■□□□ 1.84
ATN1-204ENST00000541029 MYBBP1AQ9BQG0 1328 aaKnown RBP26.57■■□□□ 1.84
ATN1-204ENST00000541029 A0A087WZG4 1122 aa26.56■■□□□ 1.84
ATN1-204ENST00000541029 IL6STP40189 918 aaPredicted RBP26.56■■□□□ 1.84
ATN1-204ENST00000541029 NFE2L2Q16236 605 aa26.56■■□□□ 1.84
ATN1-204ENST00000541029 BCS1LQ9Y276 419 aa26.56■■□□□ 1.84
ATN1-204ENST00000541029 ADCY9O60503 1353 aa26.56■■□□□ 1.84
ATN1-204ENST00000541029 ATP10DQ9P241 1426 aa26.56■■□□□ 1.84
ATN1-204ENST00000541029 USP16Q9Y5T5 823 aa26.54■■□□□ 1.84
ATN1-204ENST00000541029 KCNA3P22001 575 aa26.53■■□□□ 1.84
ATN1-204ENST00000541029 PIP4K2AP48426 406 aaPredicted RBP26.53■■□□□ 1.84
ATN1-204ENST00000541029 TAF7Q15545 349 aaPredicted RBP26.53■■□□□ 1.84
ATN1-204ENST00000541029 THUMPD2Q9BTF0 503 aaKnown RBP26.53■■□□□ 1.84
ATN1-204ENST00000541029 MIS18AQ9NYP9 233 aa26.53■■□□□ 1.84
ATN1-204ENST00000541029 TBC1D2BQ9UPU7 963 aa26.53■■□□□ 1.84
ATN1-204ENST00000541029 COL11A2P13942 1736 aaPredicted RBP26.53■■□□□ 1.84
ATN1-204ENST00000541029 SNRPA1P09661 255 aaKnown RBP26.52■■□□□ 1.84
ATN1-204ENST00000541029 BICDL1Q6ZP65 573 aa26.52■■□□□ 1.84
ATN1-204ENST00000541029 CARMIL3Q8ND23 1372 aa26.52■■□□□ 1.84
ATN1-204ENST00000541029 PNNQ9H307 717 aaKnown RBP26.52■■□□□ 1.84
ATN1-204ENST00000541029 CHRNA5P30532 468 aa26.51■■□□□ 1.83
ATN1-204ENST00000541029 SERPINB2P05120 415 aa26.5■■□□□ 1.83
ATN1-204ENST00000541029 TBC1D9BQ66K14 1250 aa26.49■■□□□ 1.83
ATN1-204ENST00000541029 NPM2Q86SE8 214 aaKnown RBP26.48■■□□□ 1.83
ATN1-204ENST00000541029 PIM2Q9P1W9 311 aa26.48■■□□□ 1.83
ATN1-204ENST00000541029 CACNA1SQ13698 1873 aa26.48■■□□□ 1.83
ATN1-204ENST00000541029 CAMTA2O94983 1202 aa26.47■■□□□ 1.83
ATN1-204ENST00000541029 SBF1O95248 1867 aa26.47■■□□□ 1.83
ATN1-204ENST00000541029 DZIP3Q86Y13 1208 aaKnown RBP26.46■■□□□ 1.83
ATN1-204ENST00000541029 PNISRQ8TF01 805 aaKnown RBP26.46■■□□□ 1.83
ATN1-204ENST00000541029 DALRD3Q5D0E6 543 aaKnown RBP26.45■■□□□ 1.82
ATN1-204ENST00000541029 NBPF26B4DH59 902 aa26.44■■□□□ 1.82
ATN1-204ENST00000541029 GIGYF1O75420 1035 aaPredicted RBP26.44■■□□□ 1.82
ATN1-204ENST00000541029 NBPF10Q6P3W6 841 aaKnown RBP26.44■■□□□ 1.82
ATN1-204ENST00000541029 ARHGAP27Q6ZUM4 889 aa26.44■■□□□ 1.82
ATN1-204ENST00000541029 NBPF15Q8N660 670 aa26.44■■□□□ 1.82
ATN1-204ENST00000541029 CCDC146Q8IYE0 955 aa26.43■■□□□ 1.82
ATN1-204ENST00000541029 PRKRIP1Q9H875 184 aaPredicted RBP26.43■■□□□ 1.82
ATN1-204ENST00000541029 NUP98P52948 1817 aa26.43■■□□□ 1.82
ATN1-204ENST00000541029 RIPK4P57078 832 aa26.42■■□□□ 1.82
ATN1-204ENST00000541029 ZNF526Q8TF50 670 aaPredicted RBP26.42■■□□□ 1.82
ATN1-204ENST00000541029 TMPOP42166 694 aaKnown RBP26.41■■□□□ 1.82
ATN1-204ENST00000541029 EIF4A1P60842 406 aaKnown RBP26.41■■□□□ 1.82
ATN1-204ENST00000541029 ARFGEF2Q9Y6D5 1785 aa26.41■■□□□ 1.82
ATN1-204ENST00000541029 WDR43Q15061 677 aaKnown RBP eCLIP26.4■■□□□ 1.82
ATN1-204ENST00000541029 PRR5LQ6MZQ0 368 aa26.4■■□□□ 1.82
ATN1-204ENST00000541029 RRP7AQ9Y3A4 280 aaKnown RBP26.4■■□□□ 1.82
ATN1-204ENST00000541029 CCDC88AQ3V6T2 1871 aa26.4■■□□□ 1.82
ATN1-204ENST00000541029 C2CD5Q86YS7 1000 aa26.39■■□□□ 1.82
ATN1-204ENST00000541029 CCDC24Q8N4L8 307 aa26.39■■□□□ 1.82
ATN1-204ENST00000541029 GPBP1L1Q9HC44 474 aaPredicted RBP26.39■■□□□ 1.82
ATN1-204ENST00000541029 C1QTNF8P60827 252 aa26.38■■□□□ 1.81
ATN1-204ENST00000541029 SETDB2Q96T68 719 aa26.38■■□□□ 1.81
ATN1-204ENST00000541029 TSPYL4Q9UJ04 414 aa26.37■■□□□ 1.81
ATN1-204ENST00000541029 LMOD3Q0VAK6 560 aa26.36■■□□□ 1.81
ATN1-204ENST00000541029 CNBD1Q8NA66 436 aa26.36■■□□□ 1.81
ATN1-204ENST00000541029 ZNF652Q9Y2D9 606 aa26.36■■□□□ 1.81
ATN1-204ENST00000541029 TIAM2Q8IVF5 1701 aa26.36■■□□□ 1.81
ATN1-204ENST00000541029 H0YIN7 160 aa26.34■■□□□ 1.81
ATN1-204ENST00000541029 ZEB1P37275 1124 aaPredicted RBP26.34■■□□□ 1.81
ATN1-204ENST00000541029 NEUROD2Q15784 382 aa26.34■■□□□ 1.81
ATN1-204ENST00000541029 CLEC4GQ6UXB4 293 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms