RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 SYCE3A1L190 88 aa16.14■□□□□ 0.17
PRICKLE3-205ENST00000540849 PPP1R42Q7Z4L9 355 aa16.14■□□□□ 0.17
PRICKLE3-205ENST00000540849 PDLIM2Q96JY6 352 aa16.14■□□□□ 0.17
PRICKLE3-205ENST00000540849 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
PRICKLE3-205ENST00000540849 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
PRICKLE3-205ENST00000540849 RAB11FIP3O75154 756 aa16.13■□□□□ 0.17
PRICKLE3-205ENST00000540849 MAP4K4O95819 1239 aaPredicted RBP16.13■□□□□ 0.17
PRICKLE3-205ENST00000540849 MBD3O95983 291 aa16.13■□□□□ 0.17
PRICKLE3-205ENST00000540849 HSPA4P34932 840 aa16.13■□□□□ 0.17
PRICKLE3-205ENST00000540849 ABTB2Q8N961 1025 aa16.13■□□□□ 0.17
PRICKLE3-205ENST00000540849 PI4K2BQ8TCG2 481 aa16.13■□□□□ 0.17
PRICKLE3-205ENST00000540849 CRYBG1Q9Y4K1 1723 aa16.12■□□□□ 0.17
PRICKLE3-205ENST00000540849 SURF6O75683 361 aaKnown RBP16.12■□□□□ 0.17
PRICKLE3-205ENST00000540849 KCNA6P17658 529 aa16.11■□□□□ 0.17
PRICKLE3-205ENST00000540849 RHPN1Q8TCX5 695 aa16.11■□□□□ 0.17
PRICKLE3-205ENST00000540849 EPB41L2O43491 1005 aaKnown RBP16.11■□□□□ 0.17
PRICKLE3-205ENST00000540849 FER1L4A9Z1Z3 1794 aa16.11■□□□□ 0.17
PRICKLE3-205ENST00000540849 NFAT5O94916 1531 aa16.1■□□□□ 0.17
PRICKLE3-205ENST00000540849 EIF2S2P20042 333 aaKnown RBP16.1■□□□□ 0.17
PRICKLE3-205ENST00000540849 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
PRICKLE3-205ENST00000540849 RAD50Q92878 1312 aa16.1■□□□□ 0.17
PRICKLE3-205ENST00000540849 NBPF7P0C2Y1 421 aaPredicted RBP16.1■□□□□ 0.17
PRICKLE3-205ENST00000540849 MSNP26038 577 aaKnown RBP16.1■□□□□ 0.17
PRICKLE3-205ENST00000540849 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
PRICKLE3-205ENST00000540849 HS1BP3Q53T59 392 aa16.1■□□□□ 0.17
PRICKLE3-205ENST00000540849 RPAP1Q9BWH6 1393 aaPredicted RBP16.09■□□□□ 0.17
PRICKLE3-205ENST00000540849 LMO7Q8WWI1 1683 aa16.09■□□□□ 0.17
PRICKLE3-205ENST00000540849 SGSM2O43147 1006 aa16.09■□□□□ 0.17
PRICKLE3-205ENST00000540849 SRGAP3O43295 1099 aa16.09■□□□□ 0.17
PRICKLE3-205ENST00000540849 CHPF2Q9P2E5 772 aa16.09■□□□□ 0.17
PRICKLE3-205ENST00000540849 BEND3Q5T5X7 828 aa16.09■□□□□ 0.17
PRICKLE3-205ENST00000540849 C14orf37Q86TY3 774 aa16.09■□□□□ 0.17
PRICKLE3-205ENST00000540849 KIF1BPQ96EK5 621 aa16.09■□□□□ 0.17
PRICKLE3-205ENST00000540849 LGR6Q9HBX8 967 aa16.09■□□□□ 0.17
PRICKLE3-205ENST00000540849 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.09■□□□□ 0.17
PRICKLE3-205ENST00000540849 RGPD2P0DJD1 1756 aa16.08■□□□□ 0.16
PRICKLE3-205ENST00000540849 PLEKHG5O94827 1062 aa16.08■□□□□ 0.16
PRICKLE3-205ENST00000540849 LSG1Q9H089 658 aaKnown RBP16.08■□□□□ 0.16
PRICKLE3-205ENST00000540849 KCNQ3O43525 872 aa16.07■□□□□ 0.16
PRICKLE3-205ENST00000540849 DNAAF4Q8WXU2 420 aa16.07■□□□□ 0.16
PRICKLE3-205ENST00000540849 CHMP4AQ9BY43 222 aa16.07■□□□□ 0.16
PRICKLE3-205ENST00000540849 SNX14Q9Y5W7 946 aa16.07■□□□□ 0.16
PRICKLE3-205ENST00000540849 ADCY9O60503 1353 aa16.07■□□□□ 0.16
PRICKLE3-205ENST00000540849 FOXD4L6Q3SYB3 417 aaPredicted RBP16.07■□□□□ 0.16
PRICKLE3-205ENST00000540849 NBPF6Q5VWK0 638 aa16.07■□□□□ 0.16
PRICKLE3-205ENST00000540849 FOXD4L3Q6VB84 417 aaPredicted RBP16.07■□□□□ 0.16
PRICKLE3-205ENST00000540849 NBPF4Q96M43 638 aa16.07■□□□□ 0.16
PRICKLE3-205ENST00000540849 GDPD2Q9HCC8 539 aa16.07■□□□□ 0.16
PRICKLE3-205ENST00000540849 NOL7Q9UMY1 257 aaKnown RBP16.07■□□□□ 0.16
PRICKLE3-205ENST00000540849 GADD45BO75293 160 aaPredicted RBP16.06■□□□□ 0.16
PRICKLE3-205ENST00000540849 OFD1O75665 1012 aa16.06■□□□□ 0.16
PRICKLE3-205ENST00000540849 HOXB7P09629 217 aa16.06■□□□□ 0.16
PRICKLE3-205ENST00000540849 CNTROBQ8N137 903 aa16.06■□□□□ 0.16
PRICKLE3-205ENST00000540849 IP6K1Q92551 441 aa16.06■□□□□ 0.16
PRICKLE3-205ENST00000540849 TTC14Q96N46 770 aa16.06■□□□□ 0.16
PRICKLE3-205ENST00000540849 WDR33Q9C0J8 1336 aaKnown RBP16.06■□□□□ 0.16
PRICKLE3-205ENST00000540849 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
PRICKLE3-205ENST00000540849 ANXA1P04083 346 aa16.06■□□□□ 0.16
PRICKLE3-205ENST00000540849 TPM2P07951 284 aa16.06■□□□□ 0.16
PRICKLE3-205ENST00000540849 KIAA1211Q6ZU35 1233 aa16.06■□□□□ 0.16
PRICKLE3-205ENST00000540849 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
PRICKLE3-205ENST00000540849 USP42Q9H9J4 1324 aaKnown RBP16.05■□□□□ 0.16
PRICKLE3-205ENST00000540849 RASEFQ8IZ41 740 aa16.05■□□□□ 0.16
PRICKLE3-205ENST00000540849 RNF214Q8ND24 703 aa16.05■□□□□ 0.16
PRICKLE3-205ENST00000540849 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
PRICKLE3-205ENST00000540849 TSPY26PQ9H489 355 aa16.04■□□□□ 0.16
PRICKLE3-205ENST00000540849 PHF8Q9UPP1 1060 aa16.04■□□□□ 0.16
PRICKLE3-205ENST00000540849 AK2P54819 239 aa16.04■□□□□ 0.16
PRICKLE3-205ENST00000540849 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.04■□□□□ 0.16
PRICKLE3-205ENST00000540849 ZNF500O60304 480 aaPredicted RBP16.03■□□□□ 0.16
PRICKLE3-205ENST00000540849 HSP90AB4PQ58FF6 505 aa16.03■□□□□ 0.16
PRICKLE3-205ENST00000540849 SYAP1Q96A49 352 aaPredicted RBP16.03■□□□□ 0.16
PRICKLE3-205ENST00000540849 PXDNQ92626 1479 aa16.03■□□□□ 0.16
PRICKLE3-205ENST00000540849 PHRF1Q9P1Y6 1649 aaKnown RBP16.03■□□□□ 0.16
PRICKLE3-205ENST00000540849 CWC27Q6UX04 472 aaKnown RBP16.03■□□□□ 0.16
PRICKLE3-205ENST00000540849 RUFY3Q7L099 469 aa16.03■□□□□ 0.16
PRICKLE3-205ENST00000540849 TMEM87AQ8NBN3 555 aa16.02■□□□□ 0.16
PRICKLE3-205ENST00000540849 LARP6Q9BRS8 491 aaKnown RBP16.02■□□□□ 0.16
PRICKLE3-205ENST00000540849 SPG7Q9UQ90 795 aa16.02■□□□□ 0.16
PRICKLE3-205ENST00000540849 ZKSCAN5Q9Y2L8 839 aa16.02■□□□□ 0.16
PRICKLE3-205ENST00000540849 TTC41PQ6P2S7 1318 aa16.02■□□□□ 0.15
PRICKLE3-205ENST00000540849 SETD1BQ9UPS6 1966 aaKnown RBP16.02■□□□□ 0.15
PRICKLE3-205ENST00000540849 BTBD11A6QL63 1104 aa16.02■□□□□ 0.15
PRICKLE3-205ENST00000540849 RRP9O43818 475 aaKnown RBP16.02■□□□□ 0.15
PRICKLE3-205ENST00000540849 ZNF530Q6P9A1 599 aaPredicted RBP16.02■□□□□ 0.15
PRICKLE3-205ENST00000540849 TCHHQ07283 1943 aa16.01■□□□□ 0.15
PRICKLE3-205ENST00000540849 ZBTB7CA1YPR0 619 aa16.01■□□□□ 0.15
PRICKLE3-205ENST00000540849 CPA1P15085 419 aa16.01■□□□□ 0.15
PRICKLE3-205ENST00000540849 MTX1Q13505 466 aa16.01■□□□□ 0.15
PRICKLE3-205ENST00000540849 LRRC59Q96AG4 307 aaKnown RBP16.01■□□□□ 0.15
PRICKLE3-205ENST00000540849 GLRX3O76003 335 aaKnown RBP16■□□□□ 0.15
PRICKLE3-205ENST00000540849 XPCQ01831 940 aaPredicted RBP16■□□□□ 0.15
PRICKLE3-205ENST00000540849 TEFQ10587 303 aa16■□□□□ 0.15
PRICKLE3-205ENST00000540849 OS9Q13438 667 aaPredicted RBP16■□□□□ 0.15
PRICKLE3-205ENST00000540849 HSP90AA2PQ14568 343 aaPredicted RBP16■□□□□ 0.15
PRICKLE3-205ENST00000540849 AKAP4Q5JQC9 854 aa16■□□□□ 0.15
PRICKLE3-205ENST00000540849 CCDC39Q9UFE4 941 aa16■□□□□ 0.15
PRICKLE3-205ENST00000540849 CNPY2Q9Y2B0 182 aa16■□□□□ 0.15
PRICKLE3-205ENST00000540849 LARGE1O95461 756 aa16■□□□□ 0.15
PRICKLE3-205ENST00000540849 ZSCAN22P10073 491 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms