RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 DDR1Q08345 913 aa22.39■■□□□ 1.17
PSMD3-204ENST00000540504 USPL1Q5W0Q7 1092 aa22.39■■□□□ 1.17
PSMD3-204ENST00000540504 TEX13AQ9BXU3 409 aaPredicted RBP22.39■■□□□ 1.17
PSMD3-204ENST00000540504 RSPH6AQ9H0K4 717 aa22.39■■□□□ 1.17
PSMD3-204ENST00000540504 GPBP1L1Q9HC44 474 aaPredicted RBP22.39■■□□□ 1.17
PSMD3-204ENST00000540504 ZBTB1Q9Y2K1 713 aa22.39■■□□□ 1.17
PSMD3-204ENST00000540504 PRKAR2BP31323 418 aa22.38■■□□□ 1.17
PSMD3-204ENST00000540504 ZNF790Q6PG37 636 aa22.38■■□□□ 1.17
PSMD3-204ENST00000540504 CEMIPQ8WUJ3 1361 aa22.38■■□□□ 1.17
PSMD3-204ENST00000540504 SENP3-EIF4A1A0A087X0R7 540 aa22.37■■□□□ 1.17
PSMD3-204ENST00000540504 POLRMTO00411 1230 aaKnown RBP22.37■■□□□ 1.17
PSMD3-204ENST00000540504 FCHSD2O94868 740 aa22.37■■□□□ 1.17
PSMD3-204ENST00000540504 HEG1Q9ULI3 1381 aa22.37■■□□□ 1.17
PSMD3-204ENST00000540504 KCNA3P22001 575 aa22.36■■□□□ 1.17
PSMD3-204ENST00000540504 PHACTR3Q96KR7 559 aa22.36■■□□□ 1.17
PSMD3-204ENST00000540504 PIM2Q9P1W9 311 aa22.36■■□□□ 1.17
PSMD3-204ENST00000540504 ARFGEF1Q9Y6D6 1849 aa22.36■■□□□ 1.17
PSMD3-204ENST00000540504 ZNF496Q96IT1 587 aaPredicted RBP22.35■■□□□ 1.17
PSMD3-204ENST00000540504 A0A087WZG4 1122 aa22.34■■□□□ 1.17
PSMD3-204ENST00000540504 U2AF1L5P0DN76 240 aaPredicted RBP22.34■■□□□ 1.17
PSMD3-204ENST00000540504 CANXP27824 592 aaKnown RBP22.34■■□□□ 1.17
PSMD3-204ENST00000540504 U2AF1Q01081 240 aaKnown RBP eCLIP22.34■■□□□ 1.17
PSMD3-204ENST00000540504 FMNL2Q96PY5 1086 aa22.34■■□□□ 1.17
PSMD3-204ENST00000540504 EIF5P55010 431 aaKnown RBP22.33■■□□□ 1.17
PSMD3-204ENST00000540504 ARHGAP27Q6ZUM4 889 aa22.33■■□□□ 1.17
PSMD3-204ENST00000540504 NRXN2Q9P2S2 1712 aa22.32■■□□□ 1.16
PSMD3-204ENST00000540504 NFIXQ14938 502 aa22.32■■□□□ 1.16
PSMD3-204ENST00000540504 DALRD3Q5D0E6 543 aaKnown RBP22.32■■□□□ 1.16
PSMD3-204ENST00000540504 AFDNP55196 1824 aaKnown RBP22.31■■□□□ 1.16
PSMD3-204ENST00000540504 BTBD11A6QL63 1104 aa22.31■■□□□ 1.16
PSMD3-204ENST00000540504 ZNF526Q8TF50 670 aaPredicted RBP22.31■■□□□ 1.16
PSMD3-204ENST00000540504 RTF1Q92541 710 aaKnown RBP22.31■■□□□ 1.16
PSMD3-204ENST00000540504 BCL2L12Q9HB09 334 aa22.31■■□□□ 1.16
PSMD3-204ENST00000540504 HTATSF1O43719 755 aaKnown RBP22.29■■□□□ 1.16
PSMD3-204ENST00000540504 SERPINB2P05120 415 aa22.29■■□□□ 1.16
PSMD3-204ENST00000540504 IL6STP40189 918 aaPredicted RBP22.29■■□□□ 1.16
PSMD3-204ENST00000540504 CHRNA5P30532 468 aa22.27■■□□□ 1.16
PSMD3-204ENST00000540504 NPM2Q86SE8 214 aaKnown RBP22.27■■□□□ 1.16
PSMD3-204ENST00000540504 SCN7AQ01118 1682 aa22.26■■□□□ 1.15
PSMD3-204ENST00000540504 DLEC1Q9Y238 1755 aa22.25■■□□□ 1.15
PSMD3-204ENST00000540504 KCNQ3O43525 872 aa22.24■■□□□ 1.15
PSMD3-204ENST00000540504 NEFMP07197 916 aa22.24■■□□□ 1.15
PSMD3-204ENST00000540504 MCM10Q7L590 875 aa22.24■■□□□ 1.15
PSMD3-204ENST00000540504 KIF3CO14782 793 aa22.23■■□□□ 1.15
PSMD3-204ENST00000540504 A1BGP04217 495 aa22.23■■□□□ 1.15
PSMD3-204ENST00000540504 TBC1D2BQ9UPU7 963 aa22.23■■□□□ 1.15
PSMD3-204ENST00000540504 ZNF330Q9Y3S2 320 aaPredicted RBP22.23■■□□□ 1.15
PSMD3-204ENST00000540504 SNRPA1P09661 255 aaKnown RBP22.22■■□□□ 1.15
PSMD3-204ENST00000540504 C9orf131Q5VYM1 1079 aa22.22■■□□□ 1.15
PSMD3-204ENST00000540504 TBC1D9BQ66K14 1250 aa22.22■■□□□ 1.15
PSMD3-204ENST00000540504 BICDL1Q6ZP65 573 aa22.22■■□□□ 1.15
PSMD3-204ENST00000540504 PDZRN3Q9UPQ7 1066 aa22.22■■□□□ 1.15
PSMD3-204ENST00000540504 USP16Q9Y5T5 823 aa22.21■■□□□ 1.15
PSMD3-204ENST00000540504 H0YIN7 160 aa22.2■■□□□ 1.14
PSMD3-204ENST00000540504 CARMIL3Q8ND23 1372 aa22.2■■□□□ 1.14
PSMD3-204ENST00000540504 CAMTA2O94983 1202 aa22.19■■□□□ 1.14
PSMD3-204ENST00000540504 DCTN1Q14203 1278 aa22.19■■□□□ 1.14
PSMD3-204ENST00000540504 TAF7Q15545 349 aaPredicted RBP22.19■■□□□ 1.14
PSMD3-204ENST00000540504 C2CD5Q86YS7 1000 aa22.19■■□□□ 1.14
PSMD3-204ENST00000540504 TTLL6Q8N841 843 aa22.19■■□□□ 1.14
PSMD3-204ENST00000540504 PNNQ9H307 717 aaKnown RBP22.19■■□□□ 1.14
PSMD3-204ENST00000540504 SBF1O95248 1867 aa22.19■■□□□ 1.14
PSMD3-204ENST00000540504 BCORQ6W2J9 1755 aa22.18■■□□□ 1.14
PSMD3-204ENST00000540504 HSPA6P17066 643 aa22.18■■□□□ 1.14
PSMD3-204ENST00000540504 DZIP3Q86Y13 1208 aaKnown RBP22.18■■□□□ 1.14
PSMD3-204ENST00000540504 BRIP1Q9BX63 1249 aa22.18■■□□□ 1.14
PSMD3-204ENST00000540504 RNF181Q9P0P0 153 aa22.18■■□□□ 1.14
PSMD3-204ENST00000540504 DLG5Q8TDM6 1919 aa22.18■■□□□ 1.14
PSMD3-204ENST00000540504 PDE6BP35913 854 aa22.17■■□□□ 1.14
PSMD3-204ENST00000540504 SETDB2Q96T68 719 aa22.17■■□□□ 1.14
PSMD3-204ENST00000540504 ANKRD31Q8N7Z5 1873 aa22.16■■□□□ 1.14
PSMD3-204ENST00000540504 TOMM70O94826 608 aa22.16■■□□□ 1.14
PSMD3-204ENST00000540504 PRR5LQ6MZQ0 368 aa22.16■■□□□ 1.14
PSMD3-204ENST00000540504 CLEC4GQ6UXB4 293 aa22.16■■□□□ 1.14
PSMD3-204ENST00000540504 PNISRQ8TF01 805 aaKnown RBP22.16■■□□□ 1.14
PSMD3-204ENST00000540504 PLEKHF1Q96S99 279 aa22.16■■□□□ 1.14
PSMD3-204ENST00000540504 KDM2BQ8NHM5 1336 aa22.15■■□□□ 1.14
PSMD3-204ENST00000540504 ZC3H4Q9UPT8 1303 aaKnown RBP22.15■■□□□ 1.14
PSMD3-204ENST00000540504 PRAMEF22A3QJZ6 481 aa22.15■■□□□ 1.14
PSMD3-204ENST00000540504 RGL2O15211 777 aa22.15■■□□□ 1.14
PSMD3-204ENST00000540504 CNBD1Q8NA66 436 aa22.14■■□□□ 1.13
PSMD3-204ENST00000540504 ZNF652Q9Y2D9 606 aa22.14■■□□□ 1.13
PSMD3-204ENST00000540504 RALBP1Q15311 655 aa22.13■■□□□ 1.13
PSMD3-204ENST00000540504 NFE2L2Q16236 605 aa22.13■■□□□ 1.13
PSMD3-204ENST00000540504 NMRK2Q9NPI5 230 aa22.13■■□□□ 1.13
PSMD3-204ENST00000540504 NPHP1O15259 732 aa22.12■■□□□ 1.13
PSMD3-204ENST00000540504 LMNB1P20700 586 aa22.12■■□□□ 1.13
PSMD3-204ENST00000540504 ST5P78524 1137 aa22.12■■□□□ 1.13
PSMD3-204ENST00000540504 LAMB4A4D0S4 1761 aa22.12■■□□□ 1.13
PSMD3-204ENST00000540504 MAPK8IP3Q9UPT6 1336 aa22.11■■□□□ 1.13
PSMD3-204ENST00000540504 PIP4K2AP48426 406 aaPredicted RBP22.11■■□□□ 1.13
PSMD3-204ENST00000540504 ZNF622Q969S3 477 aaKnown RBP eCLIP22.11■■□□□ 1.13
PSMD3-204ENST00000540504 KDM3BQ7LBC6 1761 aa22.11■■□□□ 1.13
PSMD3-204ENST00000540504 CEP350Q5VT06 3117 aa22.11■■□□□ 1.13
PSMD3-204ENST00000540504 NBPF26B4DH59 902 aa22.1■■□□□ 1.13
PSMD3-204ENST00000540504 RASSF7Q02833 373 aa22.1■■□□□ 1.13
PSMD3-204ENST00000540504 NBPF10Q6P3W6 841 aaKnown RBP22.1■■□□□ 1.13
PSMD3-204ENST00000540504 NBPF15Q8N660 670 aa22.1■■□□□ 1.13
PSMD3-204ENST00000540504 COL11A2P13942 1736 aaPredicted RBP22.09■■□□□ 1.13
PSMD3-204ENST00000540504 C16orf71Q8IYS4 520 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms