RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 ATP8B2P98198 1209 aa15.33■□□□□ 0.04
DNMT1-203ENST00000540357 PDILTQ8N807 584 aa15.33■□□□□ 0.04
DNMT1-203ENST00000540357 UBXN4Q92575 508 aa15.33■□□□□ 0.04
DNMT1-203ENST00000540357 ERCC4Q92889 916 aaPredicted RBP15.33■□□□□ 0.04
DNMT1-203ENST00000540357 TTC21BQ7Z4L5 1316 aa15.33■□□□□ 0.04
DNMT1-203ENST00000540357 WAPLQ7Z5K2 1190 aa15.32■□□□□ 0.04
DNMT1-203ENST00000540357 RALYLQ86SE5 291 aaKnown RBP15.32■□□□□ 0.04
DNMT1-203ENST00000540357 CSB-PGBD3P0DP91 1061 aa15.32■□□□□ 0.04
DNMT1-203ENST00000540357 TMCO3Q6UWJ1 677 aa15.32■□□□□ 0.04
DNMT1-203ENST00000540357 CHMLP26374 656 aa15.32■□□□□ 0.04
DNMT1-203ENST00000540357 JMYQ8N9B5 988 aa15.32■□□□□ 0.04
DNMT1-203ENST00000540357 MYOM2P54296 1465 aa15.32■□□□□ 0.04
DNMT1-203ENST00000540357 BRD1O95696 1058 aa15.32■□□□□ 0.04
DNMT1-203ENST00000540357 SERPINC1P01008 464 aa15.32■□□□□ 0.04
DNMT1-203ENST00000540357 KRT222Q8N1A0 295 aa15.32■□□□□ 0.04
DNMT1-203ENST00000540357 KIF20AO95235 890 aa15.31■□□□□ 0.04
DNMT1-203ENST00000540357 GSPT1P15170 499 aaKnown RBP15.31■□□□□ 0.04
DNMT1-203ENST00000540357 SFPQP23246 707 aaKnown RBP eCLIP15.31■□□□□ 0.04
DNMT1-203ENST00000540357 STX1AQ16623 288 aa15.31■□□□□ 0.04
DNMT1-203ENST00000540357 LEKR1Q6ZMV7 388 aa15.31■□□□□ 0.04
DNMT1-203ENST00000540357 PHACTR3Q96KR7 559 aa15.31■□□□□ 0.04
DNMT1-203ENST00000540357 IQGAP3Q86VI3 1631 aa15.31■□□□□ 0.04
DNMT1-203ENST00000540357 CREBRFQ8IUR6 639 aa15.31■□□□□ 0.04
DNMT1-203ENST00000540357 EVI5LQ96CN4 794 aa15.31■□□□□ 0.04
DNMT1-203ENST00000540357 OGFRQ9NZT2 677 aa15.31■□□□□ 0.04
DNMT1-203ENST00000540357 TTC5Q8N0Z6 440 aa15.31■□□□□ 0.04
DNMT1-203ENST00000540357 CCDC186Q7Z3E2 898 aa15.31■□□□□ 0.04
DNMT1-203ENST00000540357 DNAJC2Q99543 621 aaKnown RBP15.31■□□□□ 0.04
DNMT1-203ENST00000540357 SPG7Q9UQ90 795 aa15.31■□□□□ 0.04
DNMT1-203ENST00000540357 PLEKHF1Q96S99 279 aa15.3■□□□□ 0.04
DNMT1-203ENST00000540357 PPIP5K1Q6PFW1 1433 aa15.3■□□□□ 0.04
DNMT1-203ENST00000540357 ERICH4A6NGS2 130 aa15.3■□□□□ 0.04
DNMT1-203ENST00000540357 AIMP1Q12904 312 aaKnown RBP15.3■□□□□ 0.04
DNMT1-203ENST00000540357 SAFBQ15424 915 aaKnown RBP eCLIP15.3■□□□□ 0.04
DNMT1-203ENST00000540357 GPT2Q8TD30 523 aa15.3■□□□□ 0.04
DNMT1-203ENST00000540357 ERBB4Q15303 1308 aa15.3■□□□□ 0.04
DNMT1-203ENST00000540357 EPB41L2O43491 1005 aaKnown RBP15.29■□□□□ 0.04
DNMT1-203ENST00000540357 PLEKHO1Q53GL0 409 aaPredicted RBP15.29■□□□□ 0.04
DNMT1-203ENST00000540357 MSH6P52701 1360 aa15.29■□□□□ 0.04
DNMT1-203ENST00000540357 PREX2Q70Z35 1606 aa15.29■□□□□ 0.04
DNMT1-203ENST00000540357 TAF7Q15545 349 aaPredicted RBP15.29■□□□□ 0.04
DNMT1-203ENST00000540357 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
DNMT1-203ENST00000540357 ECHDC1Q9NTX5 307 aa15.29■□□□□ 0.04
DNMT1-203ENST00000540357 AKAP17AQ02040 695 aaKnown RBP15.29■□□□□ 0.04
DNMT1-203ENST00000540357 BMS1Q14692 1282 aaKnown RBP15.29■□□□□ 0.04
DNMT1-203ENST00000540357 ANO6Q4KMQ2 910 aa15.29■□□□□ 0.04
DNMT1-203ENST00000540357 OTUD7AQ8TE49 926 aaPredicted RBP15.29■□□□□ 0.04
DNMT1-203ENST00000540357 NEUROD6Q96NK8 337 aa15.29■□□□□ 0.04
DNMT1-203ENST00000540357 DNM1Q05193 864 aaKnown RBP15.28■□□□□ 0.04
DNMT1-203ENST00000540357 PIK3R4Q99570 1358 aa15.28■□□□□ 0.04
DNMT1-203ENST00000540357 UNC13BO14795 1591 aa15.28■□□□□ 0.04
DNMT1-203ENST00000540357 CD2BP2O95400 341 aaKnown RBP15.28■□□□□ 0.04
DNMT1-203ENST00000540357 RHPN1Q8TCX5 695 aa15.28■□□□□ 0.04
DNMT1-203ENST00000540357 TOMM22Q9NS69 142 aa15.28■□□□□ 0.04
DNMT1-203ENST00000540357 IPO7O95373 1038 aaKnown RBP15.28■□□□□ 0.04
DNMT1-203ENST00000540357 CDC42BPAQ5VT25 1732 aa15.28■□□□□ 0.04
DNMT1-203ENST00000540357 TYRO3Q06418 890 aa15.28■□□□□ 0.04
DNMT1-203ENST00000540357 RIMS2Q9UQ26 1411 aa15.28■□□□□ 0.04
DNMT1-203ENST00000540357 PPP1R42Q7Z4L9 355 aa15.27■□□□□ 0.04
DNMT1-203ENST00000540357 DACH1Q9UI36 760 aa15.27■□□□□ 0.04
DNMT1-203ENST00000540357 ABCC1P33527 1531 aa15.27■□□□□ 0.04
DNMT1-203ENST00000540357 ZSCAN12O43309 604 aa15.27■□□□□ 0.04
DNMT1-203ENST00000540357 ERLIN1O75477 346 aa15.27■□□□□ 0.04
DNMT1-203ENST00000540357 AK2P54819 239 aa15.27■□□□□ 0.04
DNMT1-203ENST00000540357 CLEC17AQ6ZS10 378 aa15.27■□□□□ 0.04
DNMT1-203ENST00000540357 RASSF8Q8NHQ8 419 aa15.27■□□□□ 0.04
DNMT1-203ENST00000540357 AOX1Q06278 1338 aa15.27■□□□□ 0.04
DNMT1-203ENST00000540357 NFXL1Q6ZNB6 911 aa15.27■□□□□ 0.03
DNMT1-203ENST00000540357 ZSCAN16Q9H4T2 348 aaPredicted RBP15.27■□□□□ 0.03
DNMT1-203ENST00000540357 HMG20BQ9P0W2 317 aa15.27■□□□□ 0.03
DNMT1-203ENST00000540357 EIF3JO75822 258 aaKnown RBP15.27■□□□□ 0.03
DNMT1-203ENST00000540357 PHF23Q9BUL5 403 aaPredicted RBP15.27■□□□□ 0.03
DNMT1-203ENST00000540357 ATP7AQ04656 1500 aa15.27■□□□□ 0.03
DNMT1-203ENST00000540357 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
DNMT1-203ENST00000540357 RAPGEF3O95398 923 aa15.26■□□□□ 0.03
DNMT1-203ENST00000540357 HMGB1P09429 215 aaKnown RBP15.26■□□□□ 0.03
DNMT1-203ENST00000540357 SYT1P21579 422 aa15.26■□□□□ 0.03
DNMT1-203ENST00000540357 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.26■□□□□ 0.03
DNMT1-203ENST00000540357 FBLN1P23142 703 aa15.26■□□□□ 0.03
DNMT1-203ENST00000540357 DNAAF4Q8WXU2 420 aa15.26■□□□□ 0.03
DNMT1-203ENST00000540357 NOL10Q9BSC4 688 aaKnown RBP15.26■□□□□ 0.03
DNMT1-203ENST00000540357 TUBB4AP04350 444 aa15.26■□□□□ 0.03
DNMT1-203ENST00000540357 VPS53Q5VIR6 699 aa15.26■□□□□ 0.03
DNMT1-203ENST00000540357 DDX11Q96FC9 970 aa15.26■□□□□ 0.03
DNMT1-203ENST00000540357 TFIP11Q9UBB9 837 aaKnown RBP15.26■□□□□ 0.03
DNMT1-203ENST00000540357 PTGS1P23219 599 aa15.26■□□□□ 0.03
DNMT1-203ENST00000540357 SNW1Q13573 536 aaKnown RBP15.26■□□□□ 0.03
DNMT1-203ENST00000540357 CCDC150Q8NCX0 1101 aa15.26■□□□□ 0.03
DNMT1-203ENST00000540357 WASHC4Q2M389 1173 aa15.25■□□□□ 0.03
DNMT1-203ENST00000540357 ZNF397Q8NF99 534 aaPredicted RBP15.25■□□□□ 0.03
DNMT1-203ENST00000540357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.25■□□□□ 0.039e-7■□□□□ 10.8
DNMT1-203ENST00000540357 E9PCH4 1651 aa15.25■□□□□ 0.03
DNMT1-203ENST00000540357 PES1O00541 588 aaKnown RBP15.25■□□□□ 0.03
DNMT1-203ENST00000540357 TRMT1Q9NXH9 659 aaKnown RBP15.25■□□□□ 0.03
DNMT1-203ENST00000540357 SSH2Q76I76 1423 aa15.25■□□□□ 0.03
DNMT1-203ENST00000540357 MYO5CQ9NQX4 1742 aa15.25■□□□□ 0.03
DNMT1-203ENST00000540357 TIGD1Q96MW7 591 aa15.25■□□□□ 0.03
DNMT1-203ENST00000540357 SIL1Q9H173 461 aa15.25■□□□□ 0.03
DNMT1-203ENST00000540357 DACT1Q9NYF0 836 aa15.25■□□□□ 0.03
DNMT1-203ENST00000540357 PKP1Q13835 747 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms