RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ZBTB1Q9Y2K1 713 aa20.45■□□□□ 0.86
UBE3B-211ENST00000539843 GOLGB1Q14789 3259 aaKnown RBP20.45■□□□□ 0.86
UBE3B-211ENST00000539843 NEFMP07197 916 aa20.44■□□□□ 0.86
UBE3B-211ENST00000539843 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
UBE3B-211ENST00000539843 PRKAR2BP31323 418 aa20.44■□□□□ 0.86
UBE3B-211ENST00000539843 RTF1Q92541 710 aaKnown RBP20.44■□□□□ 0.86
UBE3B-211ENST00000539843 ADAMTS7Q9UKP4 1686 aa20.44■□□□□ 0.86
UBE3B-211ENST00000539843 POLRMTO00411 1230 aaKnown RBP20.43■□□□□ 0.86
UBE3B-211ENST00000539843 U2AF1L5P0DN76 240 aaPredicted RBP20.43■□□□□ 0.86
UBE3B-211ENST00000539843 U2AF1Q01081 240 aaKnown RBP eCLIP20.43■□□□□ 0.86
UBE3B-211ENST00000539843 DDR1Q08345 913 aa20.43■□□□□ 0.86
UBE3B-211ENST00000539843 ZNF790Q6PG37 636 aa20.43■□□□□ 0.86
UBE3B-211ENST00000539843 FMNL2Q96PY5 1086 aa20.43■□□□□ 0.86
UBE3B-211ENST00000539843 N4BP2Q86UW6 1770 aaPredicted RBP20.42■□□□□ 0.86
UBE3B-211ENST00000539843 TM4SF1P30408 202 aa20.41■□□□□ 0.86
UBE3B-211ENST00000539843 ZNF330Q9Y3S2 320 aaPredicted RBP20.41■□□□□ 0.86
UBE3B-211ENST00000539843 HEG1Q9ULI3 1381 aa20.41■□□□□ 0.86
UBE3B-211ENST00000539843 BTBD11A6QL63 1104 aa20.4■□□□□ 0.86
UBE3B-211ENST00000539843 IL17REQ8NFR9 667 aa20.4■□□□□ 0.86
UBE3B-211ENST00000539843 ZNF496Q96IT1 587 aaPredicted RBP20.4■□□□□ 0.86
UBE3B-211ENST00000539843 PPP2R1AP30153 589 aa20.39■□□□□ 0.85
UBE3B-211ENST00000539843 NFIXQ14938 502 aa20.39■□□□□ 0.85
UBE3B-211ENST00000539843 RSPH6AQ9H0K4 717 aa20.39■□□□□ 0.85
UBE3B-211ENST00000539843 KIAA1551Q9HCM1 1747 aa20.39■□□□□ 0.85
UBE3B-211ENST00000539843 SERPINB2P05120 415 aa20.38■□□□□ 0.85
UBE3B-211ENST00000539843 VIRMAQ69YN4 1812 aaKnown RBP20.38■□□□□ 0.85
UBE3B-211ENST00000539843 UBR2Q8IWV8 1755 aa20.37■□□□□ 0.85
UBE3B-211ENST00000539843 NPHP1O15259 732 aa20.37■□□□□ 0.85
UBE3B-211ENST00000539843 CHRNA5P30532 468 aa20.37■□□□□ 0.85
UBE3B-211ENST00000539843 CEMIPQ8WUJ3 1361 aa20.36■□□□□ 0.85
UBE3B-211ENST00000539843 KCNA3P22001 575 aa20.36■□□□□ 0.85
UBE3B-211ENST00000539843 IL6STP40189 918 aaPredicted RBP20.36■□□□□ 0.85
UBE3B-211ENST00000539843 EIF5P55010 431 aaKnown RBP20.36■□□□□ 0.85
UBE3B-211ENST00000539843 PHACTR3Q96KR7 559 aa20.36■□□□□ 0.85
UBE3B-211ENST00000539843 C9orf131Q5VYM1 1079 aa20.35■□□□□ 0.85
UBE3B-211ENST00000539843 BICDL1Q6ZP65 573 aa20.35■□□□□ 0.85
UBE3B-211ENST00000539843 PDZRN3Q9UPQ7 1066 aa20.35■□□□□ 0.85
UBE3B-211ENST00000539843 H0YIN7 160 aa20.34■□□□□ 0.85
UBE3B-211ENST00000539843 HSPA6P17066 643 aa20.34■□□□□ 0.85
UBE3B-211ENST00000539843 C16orf71Q8IYS4 520 aaPredicted RBP20.34■□□□□ 0.85
UBE3B-211ENST00000539843 KDM2BQ8NHM5 1336 aa20.33■□□□□ 0.85
UBE3B-211ENST00000539843 HTATSF1O43719 755 aaKnown RBP20.33■□□□□ 0.85
UBE3B-211ENST00000539843 RNF181Q9P0P0 153 aa20.33■□□□□ 0.85
UBE3B-211ENST00000539843 ARFGEF1Q9Y6D6 1849 aa20.32■□□□□ 0.84
UBE3B-211ENST00000539843 C2CD5Q86YS7 1000 aa20.32■□□□□ 0.84
UBE3B-211ENST00000539843 TTLL6Q8N841 843 aa20.32■□□□□ 0.84
UBE3B-211ENST00000539843 PNNQ9H307 717 aaKnown RBP20.32■□□□□ 0.84
UBE3B-211ENST00000539843 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
UBE3B-211ENST00000539843 BRCA1P38398 1863 aaKnown RBP20.32■□□□□ 0.84
UBE3B-211ENST00000539843 CARMIL3Q8ND23 1372 aa20.32■□□□□ 0.84
UBE3B-211ENST00000539843 KIF3CO14782 793 aa20.31■□□□□ 0.84
UBE3B-211ENST00000539843 SNRPA1P09661 255 aaKnown RBP20.31■□□□□ 0.84
UBE3B-211ENST00000539843 PDE6BP35913 854 aa20.31■□□□□ 0.84
UBE3B-211ENST00000539843 TBC1D2BQ9UPU7 963 aa20.31■□□□□ 0.84
UBE3B-211ENST00000539843 TOMM70O94826 608 aa20.3■□□□□ 0.84
UBE3B-211ENST00000539843 MCM10Q7L590 875 aa20.3■□□□□ 0.84
UBE3B-211ENST00000539843 SETDB2Q96T68 719 aa20.3■□□□□ 0.84
UBE3B-211ENST00000539843 ZNF652Q9Y2D9 606 aa20.3■□□□□ 0.84
UBE3B-211ENST00000539843 A1BGP04217 495 aa20.29■□□□□ 0.84
UBE3B-211ENST00000539843 ST5P78524 1137 aa20.29■□□□□ 0.84
UBE3B-211ENST00000539843 DZIP3Q86Y13 1208 aaKnown RBP20.29■□□□□ 0.84
UBE3B-211ENST00000539843 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
UBE3B-211ENST00000539843 ZC3H4Q9UPT8 1303 aaKnown RBP20.28■□□□□ 0.84
UBE3B-211ENST00000539843 TBC1D9BQ66K14 1250 aa20.28■□□□□ 0.84
UBE3B-211ENST00000539843 CNBD1Q8NA66 436 aa20.28■□□□□ 0.84
UBE3B-211ENST00000539843 BRIP1Q9BX63 1249 aa20.28■□□□□ 0.84
UBE3B-211ENST00000539843 PNISRQ8TF01 805 aaKnown RBP20.27■□□□□ 0.84
UBE3B-211ENST00000539843 ZNF622Q969S3 477 aaKnown RBP eCLIP20.27■□□□□ 0.84
UBE3B-211ENST00000539843 NRXN2Q9P2S2 1712 aa20.27■□□□□ 0.83
UBE3B-211ENST00000539843 MAPK8IP3Q9UPT6 1336 aa20.27■□□□□ 0.83
UBE3B-211ENST00000539843 SCN7AQ01118 1682 aa20.26■□□□□ 0.83
UBE3B-211ENST00000539843 KCNQ3O43525 872 aa20.26■□□□□ 0.83
UBE3B-211ENST00000539843 TAF7Q15545 349 aaPredicted RBP20.26■□□□□ 0.83
UBE3B-211ENST00000539843 LMNB1P20700 586 aa20.25■□□□□ 0.83
UBE3B-211ENST00000539843 APLP1P51693 650 aa20.25■□□□□ 0.83
UBE3B-211ENST00000539843 NMRK2Q9NPI5 230 aa20.25■□□□□ 0.83
UBE3B-211ENST00000539843 AFDNP55196 1824 aaKnown RBP20.25■□□□□ 0.83
UBE3B-211ENST00000539843 CAMTA2O94983 1202 aa20.24■□□□□ 0.83
UBE3B-211ENST00000539843 PRR5LQ6MZQ0 368 aa20.24■□□□□ 0.83
UBE3B-211ENST00000539843 CLEC4GQ6UXB4 293 aa20.24■□□□□ 0.83
UBE3B-211ENST00000539843 USP16Q9Y5T5 823 aa20.24■□□□□ 0.83
UBE3B-211ENST00000539843 DCTN1Q14203 1278 aa20.23■□□□□ 0.83
UBE3B-211ENST00000539843 RBM46Q8TBY0 533 aaKnown RBP20.23■□□□□ 0.83
UBE3B-211ENST00000539843 RASSF7Q02833 373 aa20.22■□□□□ 0.83
UBE3B-211ENST00000539843 SOGA3Q5TF21 947 aa20.22■□□□□ 0.83
UBE3B-211ENST00000539843 NBPF5PQ86XG9 351 aaPredicted RBP20.22■□□□□ 0.83
UBE3B-211ENST00000539843 CNKSR1Q969H4 720 aa20.22■□□□□ 0.83
UBE3B-211ENST00000539843 RGL2O15211 777 aa20.21■□□□□ 0.83
UBE3B-211ENST00000539843 DLEC1Q9Y238 1755 aa20.2■□□□□ 0.82
UBE3B-211ENST00000539843 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
UBE3B-211ENST00000539843 FSTL1Q12841 308 aa20.19■□□□□ 0.82
UBE3B-211ENST00000539843 RALBP1Q15311 655 aa20.19■□□□□ 0.82
UBE3B-211ENST00000539843 NFE2L2Q16236 605 aa20.19■□□□□ 0.82
UBE3B-211ENST00000539843 STYK1Q6J9G0 422 aa20.19■□□□□ 0.82
UBE3B-211ENST00000539843 TPTE2Q6XPS3 522 aa20.19■□□□□ 0.82
UBE3B-211ENST00000539843 GTF2E1P29083 439 aaPredicted RBP20.18■□□□□ 0.82
UBE3B-211ENST00000539843 DPY19L2Q6NUT2 758 aa20.18■□□□□ 0.82
UBE3B-211ENST00000539843 MASTLQ96GX5 879 aa20.18■□□□□ 0.82
UBE3B-211ENST00000539843 RRAGCQ9HB90 399 aa20.18■□□□□ 0.82
UBE3B-211ENST00000539843 NIP7Q9Y221 180 aaKnown RBP eCLIP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms