RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SMC5Q8IY18 1101 aa21.37■■□□□ 1.01
PCDHB17P-201ENST00000539533 DISP2A7MBM2 1401 aa21.37■■□□□ 1.01
PCDHB17P-201ENST00000539533 C5P01031 1676 aa21.36■■□□□ 1.01
PCDHB17P-201ENST00000539533 FMNL2Q96PY5 1086 aa21.36■■□□□ 1.01
PCDHB17P-201ENST00000539533 CERKQ8TCT0 537 aa21.35■■□□□ 1.01
PCDHB17P-201ENST00000539533 USP16Q9Y5T5 823 aa21.35■■□□□ 1.01
PCDHB17P-201ENST00000539533 PI4KAP2A4QPH2 592 aa21.34■■□□□ 1.01
PCDHB17P-201ENST00000539533 PDIA6Q15084 440 aa21.34■■□□□ 1.01
PCDHB17P-201ENST00000539533 PI4KAP1Q8N8J0 262 aa21.34■■□□□ 1.01
PCDHB17P-201ENST00000539533 SNRPA1P09661 255 aaKnown RBP21.34■■□□□ 1.01
PCDHB17P-201ENST00000539533 DDX21Q9NR30 783 aaKnown RBP eCLIP21.33■■□□□ 1
PCDHB17P-201ENST00000539533 NRAPQ86VF7 1730 aa21.33■■□□□ 1
PCDHB17P-201ENST00000539533 SPATA31A1Q5TZJ5 1347 aa21.32■■□□□ 1
PCDHB17P-201ENST00000539533 ATP10DQ9P241 1426 aa21.32■■□□□ 1
PCDHB17P-201ENST00000539533 EXOC5O00471 708 aa21.32■■□□□ 1
PCDHB17P-201ENST00000539533 HYPKQ9NX55 129 aa21.32■■□□□ 1
PCDHB17P-201ENST00000539533 CEP85Q6P2H3 762 aa21.31■■□□□ 1
PCDHB17P-201ENST00000539533 DNAAF4Q8WXU2 420 aa21.31■■□□□ 1
PCDHB17P-201ENST00000539533 TOGARAM1Q9Y4F4 1720 aa21.31■■□□□ 1
PCDHB17P-201ENST00000539533 ADCY9O60503 1353 aa21.31■■□□□ 1
PCDHB17P-201ENST00000539533 ANKRD44Q8N8A2 993 aa21.31■■□□□ 1
PCDHB17P-201ENST00000539533 PXDNLA1KZ92 1463 aa21.3■■□□□ 1
PCDHB17P-201ENST00000539533 MYL6BP14649 208 aa21.3■■□□□ 1
PCDHB17P-201ENST00000539533 JCADQ9P266 1359 aa21.3■■□□□ 1
PCDHB17P-201ENST00000539533 SLIT2O94813 1529 aa21.3■■□□□ 1
PCDHB17P-201ENST00000539533 PIP4K2AP48426 406 aaPredicted RBP21.3■■□□□ 1
PCDHB17P-201ENST00000539533 AIMP1Q12904 312 aaKnown RBP21.3■■□□□ 1
PCDHB17P-201ENST00000539533 RPAP2Q8IXW5 612 aaPredicted RBP21.3■■□□□ 1
PCDHB17P-201ENST00000539533 SRCIN1Q9C0H9 1055 aa21.29■■□□□ 1
PCDHB17P-201ENST00000539533 USP44Q9H0E7 712 aa21.29■■□□□ 1
PCDHB17P-201ENST00000539533 TMOD3Q9NYL9 352 aa21.29■■□□□ 1
PCDHB17P-201ENST00000539533 CCDC9Q9Y3X0 531 aaKnown RBP21.29■■□□□ 1
PCDHB17P-201ENST00000539533 PTCD1O75127 700 aaKnown RBP21.29■■□□□ 1
PCDHB17P-201ENST00000539533 NUCB1Q02818 461 aa21.29■■□□□ 1
PCDHB17P-201ENST00000539533 BEND3Q5T5X7 828 aa21.29■■□□□ 1
PCDHB17P-201ENST00000539533 GCC1Q96CN9 775 aa21.29■■□□□ 1
PCDHB17P-201ENST00000539533 MAP3K2Q9Y2U5 619 aa21.29■■□□□ 1
PCDHB17P-201ENST00000539533 GLI3P10071 1580 aa21.28■■□□□ 1
PCDHB17P-201ENST00000539533 C8orf37Q96NL8 207 aa21.28■■□□□ 1
PCDHB17P-201ENST00000539533 SPATA31A5Q5VU36 1347 aa21.28■■□□□ 1
PCDHB17P-201ENST00000539533 SPATA31A7Q8IWB4 1347 aa21.28■■□□□ 1
PCDHB17P-201ENST00000539533 FRAT2O75474 233 aaPredicted RBP21.28■■□□□ 1
PCDHB17P-201ENST00000539533 GNAI2P04899 355 aa21.28■■□□□ 1
PCDHB17P-201ENST00000539533 KSR2Q6VAB6 950 aa21.28■■□□□ 1
PCDHB17P-201ENST00000539533 UBE2Q2Q8WVN8 375 aa21.28■■□□□ 1
PCDHB17P-201ENST00000539533 PIGBQ92521 554 aa21.28■■□□□ 1
PCDHB17P-201ENST00000539533 THRAP3Q9Y2W1 955 aaKnown RBP21.28■■□□□ 1
PCDHB17P-201ENST00000539533 N4BP2Q86UW6 1770 aaPredicted RBP21.27■■□□□ 1
PCDHB17P-201ENST00000539533 GNAI3P08754 354 aa21.27■■□□□ 1
PCDHB17P-201ENST00000539533 LNPKQ9C0E8 428 aa21.27■■□□□ 1
PCDHB17P-201ENST00000539533 WNK3Q9BYP7 1800 aa21.27■□□□□ 0.99
PCDHB17P-201ENST00000539533 ANKRD45Q5TZF3 282 aa21.26■□□□□ 0.99
PCDHB17P-201ENST00000539533 NGLY1Q96IV0 654 aa21.26■□□□□ 0.99
PCDHB17P-201ENST00000539533 NWD2Q9ULI1 1742 aa21.26■□□□□ 0.99
PCDHB17P-201ENST00000539533 CHD1LQ86WJ1 897 aa21.26■□□□□ 0.99
PCDHB17P-201ENST00000539533 KCPQ6ZWJ8 1503 aa21.26■□□□□ 0.99
PCDHB17P-201ENST00000539533 UBR2Q8IWV8 1755 aa21.26■□□□□ 0.99
PCDHB17P-201ENST00000539533 LRP10Q7Z4F1 713 aa21.25■□□□□ 0.99
PCDHB17P-201ENST00000539533 DCTPP1Q9H773 170 aa21.25■□□□□ 0.99
PCDHB17P-201ENST00000539533 PAPPAQ13219 1627 aa21.25■□□□□ 0.99
PCDHB17P-201ENST00000539533 COPS6Q7L5N1 327 aa21.25■□□□□ 0.99
PCDHB17P-201ENST00000539533 XAGE3Q8WTP9 111 aa21.25■□□□□ 0.99
PCDHB17P-201ENST00000539533 CDCA7Q9BWT1 371 aaPredicted RBP21.25■□□□□ 0.99
PCDHB17P-201ENST00000539533 ASAP1Q9ULH1 1129 aa21.25■□□□□ 0.99
PCDHB17P-201ENST00000539533 TNS2Q63HR2 1409 aa21.25■□□□□ 0.99
PCDHB17P-201ENST00000539533 DDB1Q16531 1140 aa21.24■□□□□ 0.99
PCDHB17P-201ENST00000539533 UNC5CLQ8IV45 518 aa21.24■□□□□ 0.99
PCDHB17P-201ENST00000539533 LRRFIP2Q9Y608 721 aaKnown RBP21.24■□□□□ 0.99
PCDHB17P-201ENST00000539533 UBTFL1P0CB47 393 aaPredicted RBP21.23■□□□□ 0.99
PCDHB17P-201ENST00000539533 KAT6BQ8WYB5 2073 aa21.23■□□□□ 0.99
PCDHB17P-201ENST00000539533 DDX58O95786 925 aaKnown RBP21.23■□□□□ 0.99
PCDHB17P-201ENST00000539533 NBPF7P0C2Y1 421 aaPredicted RBP21.23■□□□□ 0.99
PCDHB17P-201ENST00000539533 EIF5BO60841 1220 aaKnown RBP21.22■□□□□ 0.99
PCDHB17P-201ENST00000539533 ITGB4P16144 1822 aa21.22■□□□□ 0.99
PCDHB17P-201ENST00000539533 BCL9LQ86UU0 1499 aa21.22■□□□□ 0.99
PCDHB17P-201ENST00000539533 CWF19L2Q2TBE0 894 aaKnown RBP21.22■□□□□ 0.99
PCDHB17P-201ENST00000539533 SYTL4Q96C24 671 aaPredicted RBP21.22■□□□□ 0.99
PCDHB17P-201ENST00000539533 ATG3Q9NT62 314 aa21.22■□□□□ 0.99
PCDHB17P-201ENST00000539533 NBPF26B4DH59 902 aa21.21■□□□□ 0.99
PCDHB17P-201ENST00000539533 NBPF14Q5TI25 921 aa21.21■□□□□ 0.99
PCDHB17P-201ENST00000539533 NBPF10Q6P3W6 841 aaKnown RBP21.21■□□□□ 0.99
PCDHB17P-201ENST00000539533 RIC3Q7Z5B4 369 aa21.21■□□□□ 0.99
PCDHB17P-201ENST00000539533 NBPF15Q8N660 670 aa21.21■□□□□ 0.99
PCDHB17P-201ENST00000539533 A1BGP04217 495 aa21.21■□□□□ 0.99
PCDHB17P-201ENST00000539533 HSPA1LP34931 641 aa21.21■□□□□ 0.99
PCDHB17P-201ENST00000539533 BARGINQ6ZT62 677 aa21.21■□□□□ 0.99
PCDHB17P-201ENST00000539533 LAMB4A4D0S4 1761 aa21.21■□□□□ 0.99
PCDHB17P-201ENST00000539533 PNMA6EA0A0J9YXQ4 647 aa21.2■□□□□ 0.98
PCDHB17P-201ENST00000539533 SEC24BO95487 1268 aa21.2■□□□□ 0.98
PCDHB17P-201ENST00000539533 LRP6O75581 1613 aa21.2■□□□□ 0.98
PCDHB17P-201ENST00000539533 HMMRO75330 724 aa21.19■□□□□ 0.98
PCDHB17P-201ENST00000539533 PRIM1P49642 420 aaKnown RBP21.19■□□□□ 0.98
PCDHB17P-201ENST00000539533 BCL9O00512 1426 aa21.19■□□□□ 0.98
PCDHB17P-201ENST00000539533 SPATA31A6Q5VVP1 1343 aa21.19■□□□□ 0.98
PCDHB17P-201ENST00000539533 ATP8B2P98198 1209 aa21.19■□□□□ 0.98
PCDHB17P-201ENST00000539533 ANKRD13DQ6ZTN6 518 aa21.19■□□□□ 0.98
PCDHB17P-201ENST00000539533 MARCH10Q8NA82 808 aaPredicted RBP21.19■□□□□ 0.98
PCDHB17P-201ENST00000539533 FAM98CQ17RN3 349 aaKnown RBP21.18■□□□□ 0.98
PCDHB17P-201ENST00000539533 FNBP4Q8N3X1 1017 aaPredicted RBP21.18■□□□□ 0.98
PCDHB17P-201ENST00000539533 ALDH1L1O75891 902 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms