RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 IQSEC3Q9UPP2 1182 aaPredicted RBP11.73□□□□□ -0.53
TRAV11-201ENST00000539512 PLA2G4AP47712 749 aa11.72□□□□□ -0.53
TRAV11-201ENST00000539512 TEAD4Q15561 434 aa11.72□□□□□ -0.53
TRAV11-201ENST00000539512 NBPF1Q3BBV0 1214 aa11.72□□□□□ -0.53
TRAV11-201ENST00000539512 PRICKLE2Q7Z3G6 844 aa11.72□□□□□ -0.53
TRAV11-201ENST00000539512 TXNDC2Q86VQ3 553 aa11.72□□□□□ -0.53
TRAV11-201ENST00000539512 COL26A1Q96A83 441 aa11.72□□□□□ -0.53
TRAV11-201ENST00000539512 NGLY1Q96IV0 654 aa11.72□□□□□ -0.53
TRAV11-201ENST00000539512 NOS2P35228 1153 aa11.71□□□□□ -0.53
TRAV11-201ENST00000539512 FOXD4L5Q5VV16 416 aaPredicted RBP11.71□□□□□ -0.53
TRAV11-201ENST00000539512 L3MBTL2Q969R5 705 aa11.71□□□□□ -0.53
TRAV11-201ENST00000539512 C2orf49Q9BVC5 232 aaPredicted RBP11.71□□□□□ -0.53
TRAV11-201ENST00000539512 USP3Q9Y6I4 520 aa11.71□□□□□ -0.53
TRAV11-201ENST00000539512 NAA30Q147X3 362 aaPredicted RBP11.7□□□□□ -0.54
TRAV11-201ENST00000539512 TRIM46Q7Z4K8 759 aa11.7□□□□□ -0.54
TRAV11-201ENST00000539512 RNF217Q8TC41 542 aa11.7□□□□□ -0.54
TRAV11-201ENST00000539512 AIDAQ96BJ3 306 aa11.7□□□□□ -0.54
TRAV11-201ENST00000539512 ZFP42Q96MM3 310 aa11.7□□□□□ -0.54
TRAV11-201ENST00000539512 PARP3Q9Y6F1 533 aa11.7□□□□□ -0.54
TRAV11-201ENST00000539512 ST8SIA5O15466 376 aa11.69□□□□□ -0.54
TRAV11-201ENST00000539512 SCNN1AP37088 669 aa11.69□□□□□ -0.54
TRAV11-201ENST00000539512 SERPINB4P48594 390 aa11.69□□□□□ -0.54
TRAV11-201ENST00000539512 TMCO4Q5TGY1 634 aa11.69□□□□□ -0.54
TRAV11-201ENST00000539512 FIGNL2A6NMB9 653 aa11.68□□□□□ -0.54
TRAV11-201ENST00000539512 MAN1A2O60476 641 aa11.68□□□□□ -0.54
TRAV11-201ENST00000539512 TATP17735 454 aaPredicted RBP11.68□□□□□ -0.54
TRAV11-201ENST00000539512 PHKA2P46019 1235 aa11.68□□□□□ -0.54
TRAV11-201ENST00000539512 POU4F2Q12837 409 aa11.68□□□□□ -0.54
TRAV11-201ENST00000539512 C4orf17Q53FE4 359 aa11.68□□□□□ -0.54
TRAV11-201ENST00000539512 GTF3C2Q8WUA4 911 aaPredicted RBP11.68□□□□□ -0.54
TRAV11-201ENST00000539512 ATP13A2Q9NQ11 1180 aa11.68□□□□□ -0.54
TRAV11-201ENST00000539512 AAASQ9NRG9 546 aa11.68□□□□□ -0.54
TRAV11-201ENST00000539512 SEPT3Q9UH03 358 aa11.68□□□□□ -0.54
TRAV11-201ENST00000539512 HCN4Q9Y3Q4 1203 aa11.68□□□□□ -0.54
TRAV11-201ENST00000539512 SPATA31C2B4DYI2 1134 aa11.67□□□□□ -0.54
TRAV11-201ENST00000539512 EML1O00423 815 aa11.67□□□□□ -0.54
TRAV11-201ENST00000539512 C16orf46Q6P387 395 aa11.67□□□□□ -0.54
TRAV11-201ENST00000539512 NBPF10Q6P3W6 841 aaKnown RBP11.67□□□□□ -0.54
TRAV11-201ENST00000539512 GLYCTKQ8IVS8 523 aa11.67□□□□□ -0.54
TRAV11-201ENST00000539512 BIN2Q9UBW5 565 aaPredicted RBP11.67□□□□□ -0.54
TRAV11-201ENST00000539512 EGFL7Q9UHF1 273 aa11.67□□□□□ -0.54
TRAV11-201ENST00000539512 SOS2Q07890 1332 aaPredicted RBP11.66□□□□□ -0.54
TRAV11-201ENST00000539512 SENP2Q9HC62 589 aa11.66□□□□□ -0.54
TRAV11-201ENST00000539512 TIMMDC1Q9NPL8 285 aa11.66□□□□□ -0.54
TRAV11-201ENST00000539512 CCDC9Q9Y3X0 531 aaKnown RBP11.66□□□□□ -0.54
TRAV11-201ENST00000539512 H3BRB1 525 aa11.65□□□□□ -0.54
TRAV11-201ENST00000539512 RHOQP17081 205 aa11.65□□□□□ -0.54
TRAV11-201ENST00000539512 HIRAP54198 1017 aaPredicted RBP11.65□□□□□ -0.54
TRAV11-201ENST00000539512 ZNF211Q13398 564 aaPredicted RBP11.65□□□□□ -0.54
TRAV11-201ENST00000539512 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.65□□□□□ -0.54
TRAV11-201ENST00000539512 WDR44Q5JSH3 913 aa11.65□□□□□ -0.54
TRAV11-201ENST00000539512 ALDH16A1Q8IZ83 802 aa11.65□□□□□ -0.54
TRAV11-201ENST00000539512 ZDHHC1Q8WTX9 485 aa11.65□□□□□ -0.54
TRAV11-201ENST00000539512 PHACTR1Q9C0D0 580 aa11.65□□□□□ -0.54
TRAV11-201ENST00000539512 TUT1Q9H6E5 874 aaKnown RBP11.65□□□□□ -0.54
TRAV11-201ENST00000539512 SF3B2Q13435 895 aaKnown RBP11.64□□□□□ -0.55
TRAV11-201ENST00000539512 Q6ZNB5 142 aa11.64□□□□□ -0.55
TRAV11-201ENST00000539512 CAPN12Q6ZSI9 719 aa11.64□□□□□ -0.55
TRAV11-201ENST00000539512 SND1Q7KZF4 910 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRAV11-201ENST00000539512 HELQQ8TDG4 1101 aa11.64□□□□□ -0.55
TRAV11-201ENST00000539512 KIFC2Q96AC6 838 aa11.64□□□□□ -0.55
TRAV11-201ENST00000539512 NEUROD4Q9HD90 331 aa11.64□□□□□ -0.55
TRAV11-201ENST00000539512 ANO2Q9NQ90 1003 aa11.64□□□□□ -0.55
TRAV11-201ENST00000539512 HIF1AQ16665 826 aa11.63□□□□□ -0.55
TRAV11-201ENST00000539512 RTN1Q16799 776 aa11.63□□□□□ -0.55
TRAV11-201ENST00000539512 SH3PXD2AQ5TCZ1 1133 aa11.63□□□□□ -0.55
TRAV11-201ENST00000539512 C1orf53Q5VUE5 145 aa11.63□□□□□ -0.55
TRAV11-201ENST00000539512 BICDL1Q6ZP65 573 aa11.63□□□□□ -0.55
TRAV11-201ENST00000539512 RHPN1Q8TCX5 695 aa11.63□□□□□ -0.55
TRAV11-201ENST00000539512 ZDHHC3Q9NYG2 299 aa11.63□□□□□ -0.55
TRAV11-201ENST00000539512 A0A1B0GTH6 734 aa11.62□□□□□ -0.55
TRAV11-201ENST00000539512 SOWAHDA6NJG2 315 aa11.62□□□□□ -0.55
TRAV11-201ENST00000539512 FKBP4Q02790 459 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRAV11-201ENST00000539512 ARSJQ5FYB0 599 aaPredicted RBP11.61□□□□□ -0.55
TRAV11-201ENST00000539512 DNMT3AQ9Y6K1 912 aaPredicted RBP11.61□□□□□ -0.55
TRAV11-201ENST00000539512 ICMTO60725 284 aa11.6□□□□□ -0.55
TRAV11-201ENST00000539512 POTEAQ6S8J7 498 aa11.6□□□□□ -0.55
TRAV11-201ENST00000539512 ZNF295-AS1Q8N0V1 137 aa11.6□□□□□ -0.55
TRAV11-201ENST00000539512 QTRT2Q9H974 415 aaKnown RBP11.6□□□□□ -0.55
TRAV11-201ENST00000539512 DNMT3LQ9UJW3 386 aa11.6□□□□□ -0.55
TRAV11-201ENST00000539512 GJA3Q9Y6H8 435 aa11.6□□□□□ -0.55
TRAV11-201ENST00000539512 FAM13AO94988 1023 aa11.59□□□□□ -0.55
TRAV11-201ENST00000539512 TXLNAP40222 546 aa11.59□□□□□ -0.55
TRAV11-201ENST00000539512 AAMPQ13685 434 aa11.59□□□□□ -0.55
TRAV11-201ENST00000539512 CCDC27Q2M243 656 aa11.59□□□□□ -0.55
TRAV11-201ENST00000539512 COX20Q5RI15 118 aa11.59□□□□□ -0.55
TRAV11-201ENST00000539512 PGBD3Q8N328 593 aa11.59□□□□□ -0.55
TRAV11-201ENST00000539512 ABTB2Q8N961 1025 aa11.59□□□□□ -0.55
TRAV11-201ENST00000539512 MYO19Q96H55 970 aa11.59□□□□□ -0.55
TRAV11-201ENST00000539512 BRD2P25440 801 aaKnown RBP11.58□□□□□ -0.56
TRAV11-201ENST00000539512 DGKZQ13574 1117 aa11.58□□□□□ -0.56
TRAV11-201ENST00000539512 MTMR3Q13615 1198 aa11.58□□□□□ -0.56
TRAV11-201ENST00000539512 SAP130Q9H0E3 1048 aa11.58□□□□□ -0.56
TRAV11-201ENST00000539512 STIM2Q9P246 746 aa11.58□□□□□ -0.56
TRAV11-201ENST00000539512 GPC6Q9Y625 555 aaPredicted RBP11.58□□□□□ -0.56
TRAV11-201ENST00000539512 C11orf91Q3C1V1 193 aa11.57□□□□□ -0.56
TRAV11-201ENST00000539512 GAS2L1Q99501 681 aaPredicted RBP11.57□□□□□ -0.56
TRAV11-201ENST00000539512 DACH1Q9UI36 760 aa11.57□□□□□ -0.56
TRAV11-201ENST00000539512 MSX1P28360 303 aa11.56□□□□□ -0.56
TRAV11-201ENST00000539512 GPAMQ9HCL2 828 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms