RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 AMPHP49418 695 aa14.46□□□□□ -0.09
NEK6-212ENST00000539416 ZNF771Q7L3S4 317 aaPredicted RBP14.46□□□□□ -0.09
NEK6-212ENST00000539416 USP25Q9UHP3 1055 aa14.46□□□□□ -0.09
NEK6-212ENST00000539416 U2AF1L5P0DN76 240 aaPredicted RBP14.45□□□□□ -0.1
NEK6-212ENST00000539416 U2AF1Q01081 240 aaKnown RBP eCLIP14.45□□□□□ -0.1
NEK6-212ENST00000539416 USP26Q9BXU7 913 aa14.45□□□□□ -0.1
NEK6-212ENST00000539416 SPTLC3Q9NUV7 552 aa14.45□□□□□ -0.1
NEK6-212ENST00000539416 RIOK3O14730 519 aaKnown RBP14.45□□□□□ -0.1
NEK6-212ENST00000539416 HOXC9P31274 260 aa14.45□□□□□ -0.1
NEK6-212ENST00000539416 ARHGEF25Q86VW2 580 aa14.45□□□□□ -0.1
NEK6-212ENST00000539416 CERKQ8TCT0 537 aa14.45□□□□□ -0.1
NEK6-212ENST00000539416 ANKRD7Q92527 254 aa14.45□□□□□ -0.1
NEK6-212ENST00000539416 IP6K1Q92551 441 aa14.45□□□□□ -0.1
NEK6-212ENST00000539416 EIF4A2Q14240 407 aaKnown RBP14.44□□□□□ -0.1
NEK6-212ENST00000539416 MBD3O95983 291 aa14.44□□□□□ -0.1
NEK6-212ENST00000539416 HSP90AB2PQ58FF8 381 aa14.44□□□□□ -0.1
NEK6-212ENST00000539416 PLCD3Q8N3E9 789 aa14.44□□□□□ -0.1
NEK6-212ENST00000539416 RGPD1P0DJD0 1748 aa14.43□□□□□ -0.1
NEK6-212ENST00000539416 U2SURPO15042 1029 aaKnown RBP14.43□□□□□ -0.1
NEK6-212ENST00000539416 SIRT2Q8IXJ6 389 aa14.43□□□□□ -0.1
NEK6-212ENST00000539416 GCC1Q96CN9 775 aa14.43□□□□□ -0.1
NEK6-212ENST00000539416 FCHSD2O94868 740 aa14.43□□□□□ -0.1
NEK6-212ENST00000539416 ADCY5O95622 1261 aa14.42□□□□□ -0.1
NEK6-212ENST00000539416 NCBP3Q53F19 620 aaKnown RBP14.42□□□□□ -0.1
NEK6-212ENST00000539416 TAF3Q5VWG9 929 aa14.42□□□□□ -0.1
NEK6-212ENST00000539416 LRRC59Q96AG4 307 aaKnown RBP14.42□□□□□ -0.1
NEK6-212ENST00000539416 TRIM35Q9UPQ4 493 aa14.42□□□□□ -0.1
NEK6-212ENST00000539416 ABCC6O95255 1503 aa14.42□□□□□ -0.1
NEK6-212ENST00000539416 PLEKHF1Q96S99 279 aa14.42□□□□□ -0.1
NEK6-212ENST00000539416 ZBTB7BO15156 539 aaPredicted RBP14.41□□□□□ -0.1
NEK6-212ENST00000539416 CPDO75976 1380 aa14.41□□□□□ -0.1
NEK6-212ENST00000539416 UBAP1LF5GYI3 381 aa14.41□□□□□ -0.1
NEK6-212ENST00000539416 IPO8O15397 1037 aaKnown RBP14.41□□□□□ -0.1
NEK6-212ENST00000539416 GADD45BO75293 160 aaPredicted RBP14.41□□□□□ -0.1
NEK6-212ENST00000539416 FOXD4L6Q3SYB3 417 aaPredicted RBP14.41□□□□□ -0.1
NEK6-212ENST00000539416 FOXD4L3Q6VB84 417 aaPredicted RBP14.41□□□□□ -0.1
NEK6-212ENST00000539416 COL22A1Q8NFW1 1626 aaPredicted RBP14.41□□□□□ -0.1
NEK6-212ENST00000539416 PHLPP1O60346 1717 aa14.4□□□□□ -0.1
NEK6-212ENST00000539416 ABCA3Q99758 1704 aa14.4□□□□□ -0.1
NEK6-212ENST00000539416 GDPD2Q9HCC8 539 aa14.4□□□□□ -0.1
NEK6-212ENST00000539416 COL18A1P39060 1754 aa14.4□□□□□ -0.1
NEK6-212ENST00000539416 PLEKHM2Q8IWE5 1019 aa14.4□□□□□ -0.1
NEK6-212ENST00000539416 PYCARDQ9ULZ3 195 aa14.4□□□□□ -0.1
NEK6-212ENST00000539416 ST18O60284 1047 aa14.39□□□□□ -0.11
NEK6-212ENST00000539416 COL16A1Q07092 1604 aaPredicted RBP14.39□□□□□ -0.11
NEK6-212ENST00000539416 MAPK8IP2Q13387 824 aaPredicted RBP14.39□□□□□ -0.11
NEK6-212ENST00000539416 SMARCA5O60264 1052 aaPredicted RBP14.39□□□□□ -0.11
NEK6-212ENST00000539416 TMPOP42166 694 aaKnown RBP14.39□□□□□ -0.11
NEK6-212ENST00000539416 IRX5P78411 483 aaPredicted RBP14.39□□□□□ -0.11
NEK6-212ENST00000539416 C16orf71Q8IYS4 520 aaPredicted RBP14.39□□□□□ -0.11
NEK6-212ENST00000539416 OGFRQ9NZT2 677 aa14.39□□□□□ -0.11
NEK6-212ENST00000539416 CTIFO43310 598 aaKnown RBP14.38□□□□□ -0.11
NEK6-212ENST00000539416 CABLES1Q8TDN4 633 aa14.38□□□□□ -0.11
NEK6-212ENST00000539416 FEZ1Q99689 392 aa14.38□□□□□ -0.11
NEK6-212ENST00000539416 SLFN14P0C7P3 912 aa14.38□□□□□ -0.11
NEK6-212ENST00000539416 KCNJ4P48050 445 aa14.38□□□□□ -0.11
NEK6-212ENST00000539416 UVSSAQ2YD98 709 aa14.38□□□□□ -0.11
NEK6-212ENST00000539416 KIAA1524Q8TCG1 905 aa14.38□□□□□ -0.11
NEK6-212ENST00000539416 KCNF1Q9H3M0 494 aa14.38□□□□□ -0.11
NEK6-212ENST00000539416 IGSF1Q8N6C5 1336 aa14.37□□□□□ -0.11
NEK6-212ENST00000539416 BRD1O95696 1058 aa14.37□□□□□ -0.11
NEK6-212ENST00000539416 DIAPH3Q9NSV4 1193 aa14.37□□□□□ -0.11
NEK6-212ENST00000539416 ZC3H6P61129 1189 aaKnown RBP14.37□□□□□ -0.11
NEK6-212ENST00000539416 HCLS1P14317 486 aaPredicted RBP14.36□□□□□ -0.11
NEK6-212ENST00000539416 PIP4K2BP78356 416 aa14.36□□□□□ -0.11
NEK6-212ENST00000539416 NCBP1Q09161 790 aaKnown RBP14.36□□□□□ -0.11
NEK6-212ENST00000539416 TTC22Q5TAA0 569 aa14.36□□□□□ -0.11
NEK6-212ENST00000539416 SYAP1Q96A49 352 aaPredicted RBP14.36□□□□□ -0.11
NEK6-212ENST00000539416 EYA1Q99502 592 aa14.36□□□□□ -0.11
NEK6-212ENST00000539416 CDK11BP21127 795 aaKnown RBP14.36□□□□□ -0.11
NEK6-212ENST00000539416 TPRNQ4KMQ1 711 aa14.36□□□□□ -0.11
NEK6-212ENST00000539416 CTNNA3Q9UI47 895 aa14.36□□□□□ -0.11
NEK6-212ENST00000539416 AP5Z1O43299 807 aa14.35□□□□□ -0.11
NEK6-212ENST00000539416 PRKAR2BP31323 418 aa14.35□□□□□ -0.11
NEK6-212ENST00000539416 PLCB2Q00722 1185 aa14.35□□□□□ -0.11
NEK6-212ENST00000539416 OTUD7AQ8TE49 926 aaPredicted RBP14.35□□□□□ -0.11
NEK6-212ENST00000539416 TMX3Q96JJ7 454 aa14.35□□□□□ -0.11
NEK6-212ENST00000539416 KDRP35968 1356 aa14.35□□□□□ -0.11
NEK6-212ENST00000539416 HMOX1P09601 288 aa14.35□□□□□ -0.11
NEK6-212ENST00000539416 CHAF1AQ13111 956 aaPredicted RBP14.35□□□□□ -0.11
NEK6-212ENST00000539416 NAA30Q147X3 362 aaPredicted RBP14.35□□□□□ -0.11
NEK6-212ENST00000539416 FAM184AQ8NB25 1140 aa14.35□□□□□ -0.11
NEK6-212ENST00000539416 GABPB1Q06547 395 aaPredicted RBP14.34□□□□□ -0.11
NEK6-212ENST00000539416 INTS3Q68E01 1043 aaKnown RBP14.34□□□□□ -0.11
NEK6-212ENST00000539416 SULT6B1Q6IMI4 303 aa14.34□□□□□ -0.11
NEK6-212ENST00000539416 AXIN2Q9Y2T1 843 aa14.34□□□□□ -0.11
NEK6-212ENST00000539416 KIAA0232Q92628 1395 aa14.34□□□□□ -0.11
NEK6-212ENST00000539416 CAMTA1Q9Y6Y1 1673 aa14.34□□□□□ -0.11
NEK6-212ENST00000539416 RGPD5Q99666 1765 aa14.34□□□□□ -0.11
NEK6-212ENST00000539416 USP48Q86UV5 1035 aa14.34□□□□□ -0.11
NEK6-212ENST00000539416 NCAPD2Q15021 1401 aa14.34□□□□□ -0.11
NEK6-212ENST00000539416 KDM4AO75164 1064 aa14.33□□□□□ -0.11
NEK6-212ENST00000539416 ANKRD24Q8TF21 1146 aa14.33□□□□□ -0.11
NEK6-212ENST00000539416 LMO7Q8WWI1 1683 aa14.33□□□□□ -0.12
NEK6-212ENST00000539416 PHF14O94880 888 aa14.33□□□□□ -0.12
NEK6-212ENST00000539416 SDSP20132 328 aa14.33□□□□□ -0.12
NEK6-212ENST00000539416 ALDH1L2Q3SY69 923 aa14.33□□□□□ -0.12
NEK6-212ENST00000539416 NEK4P51957 841 aa14.32□□□□□ -0.12
NEK6-212ENST00000539416 NOL8Q76FK4 1167 aaKnown RBP14.32□□□□□ -0.12
NEK6-212ENST00000539416 AEBP1Q8IUX7 1158 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms