RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 KCNQ3O43525 872 aa25.4■■□□□ 1.66
TNFRSF1A-212ENST00000539372 STARD3NLO95772 234 aa25.4■■□□□ 1.66
TNFRSF1A-212ENST00000539372 DDR1Q08345 913 aa25.4■■□□□ 1.66
TNFRSF1A-212ENST00000539372 HEG1Q9ULI3 1381 aa25.4■■□□□ 1.66
TNFRSF1A-212ENST00000539372 A0A0G2JLW4 131 aa25.39■■□□□ 1.66
TNFRSF1A-212ENST00000539372 KIF13BQ9NQT8 1826 aa25.39■■□□□ 1.65
TNFRSF1A-212ENST00000539372 TGFB2P61812 414 aa25.38■■□□□ 1.65
TNFRSF1A-212ENST00000539372 DDX10Q13206 875 aaKnown RBP25.38■■□□□ 1.65
TNFRSF1A-212ENST00000539372 DCTN1Q14203 1278 aa25.38■■□□□ 1.65
TNFRSF1A-212ENST00000539372 FMNL2Q96PY5 1086 aa25.38■■□□□ 1.65
TNFRSF1A-212ENST00000539372 NARFQ9UHQ1 456 aa25.37■■□□□ 1.65
TNFRSF1A-212ENST00000539372 N4BP2Q86UW6 1770 aaPredicted RBP25.36■■□□□ 1.65
TNFRSF1A-212ENST00000539372 DPEP1P16444 411 aa25.36■■□□□ 1.65
TNFRSF1A-212ENST00000539372 KIAA1551Q9HCM1 1747 aa25.36■■□□□ 1.65
TNFRSF1A-212ENST00000539372 POLRMTO00411 1230 aaKnown RBP25.35■■□□□ 1.65
TNFRSF1A-212ENST00000539372 TM4SF1P30408 202 aa25.35■■□□□ 1.65
TNFRSF1A-212ENST00000539372 TEX13AQ9BXU3 409 aaPredicted RBP25.35■■□□□ 1.65
TNFRSF1A-212ENST00000539372 ZNF330Q9Y3S2 320 aaPredicted RBP25.34■■□□□ 1.65
TNFRSF1A-212ENST00000539372 NEFMP07197 916 aa25.33■■□□□ 1.65
TNFRSF1A-212ENST00000539372 EIF5P55010 431 aaKnown RBP25.33■■□□□ 1.65
TNFRSF1A-212ENST00000539372 BCL2L12Q9HB09 334 aa25.33■■□□□ 1.65
TNFRSF1A-212ENST00000539372 BCS1LQ9Y276 419 aa25.33■■□□□ 1.65
TNFRSF1A-212ENST00000539372 HTATSF1O43719 755 aaKnown RBP25.32■■□□□ 1.64
TNFRSF1A-212ENST00000539372 A1BGP04217 495 aa25.32■■□□□ 1.64
TNFRSF1A-212ENST00000539372 NFIXQ14938 502 aa25.32■■□□□ 1.64
TNFRSF1A-212ENST00000539372 RALBP1Q15311 655 aa25.32■■□□□ 1.64
TNFRSF1A-212ENST00000539372 PLEKHF1Q96S99 279 aa25.31■■□□□ 1.64
TNFRSF1A-212ENST00000539372 A0A087WZG4 1122 aa25.3■■□□□ 1.64
TNFRSF1A-212ENST00000539372 PRAMEF22A3QJZ6 481 aa25.3■■□□□ 1.64
TNFRSF1A-212ENST00000539372 KCNA3P22001 575 aa25.29■■□□□ 1.64
TNFRSF1A-212ENST00000539372 MIS18AQ9NYP9 233 aa25.28■■□□□ 1.64
TNFRSF1A-212ENST00000539372 TBC1D2BQ9UPU7 963 aa25.28■■□□□ 1.64
TNFRSF1A-212ENST00000539372 USP16Q9Y5T5 823 aa25.28■■□□□ 1.64
TNFRSF1A-212ENST00000539372 CHRNA5P30532 468 aa25.27■■□□□ 1.64
TNFRSF1A-212ENST00000539372 PIP4K2AP48426 406 aaPredicted RBP25.27■■□□□ 1.64
TNFRSF1A-212ENST00000539372 BICDL1Q6ZP65 573 aa25.27■■□□□ 1.64
TNFRSF1A-212ENST00000539372 ATP10DQ9P241 1426 aa25.27■■□□□ 1.64
TNFRSF1A-212ENST00000539372 IL6STP40189 918 aaPredicted RBP25.26■■□□□ 1.63
TNFRSF1A-212ENST00000539372 TAF7Q15545 349 aaPredicted RBP25.26■■□□□ 1.63
TNFRSF1A-212ENST00000539372 NFE2L2Q16236 605 aa25.26■■□□□ 1.63
TNFRSF1A-212ENST00000539372 MAPK8IP3Q9UPT6 1336 aa25.26■■□□□ 1.63
TNFRSF1A-212ENST00000539372 SERPINB2P05120 415 aa25.25■■□□□ 1.63
TNFRSF1A-212ENST00000539372 SNRPA1P09661 255 aaKnown RBP25.25■■□□□ 1.63
TNFRSF1A-212ENST00000539372 PIM2Q9P1W9 311 aa25.25■■□□□ 1.63
TNFRSF1A-212ENST00000539372 ARHGAP27Q6ZUM4 889 aa25.24■■□□□ 1.63
TNFRSF1A-212ENST00000539372 NPM2Q86SE8 214 aaKnown RBP25.24■■□□□ 1.63
TNFRSF1A-212ENST00000539372 THUMPD2Q9BTF0 503 aaKnown RBP25.24■■□□□ 1.63
TNFRSF1A-212ENST00000539372 PNNQ9H307 717 aaKnown RBP25.24■■□□□ 1.63
TNFRSF1A-212ENST00000539372 DLG5Q8TDM6 1919 aa25.24■■□□□ 1.63
TNFRSF1A-212ENST00000539372 ADCY9O60503 1353 aa25.23■■□□□ 1.63
TNFRSF1A-212ENST00000539372 GIGYF1O75420 1035 aaPredicted RBP25.23■■□□□ 1.63
TNFRSF1A-212ENST00000539372 TBC1D9BQ66K14 1250 aa25.23■■□□□ 1.63
TNFRSF1A-212ENST00000539372 BRCA1P38398 1863 aaKnown RBP25.23■■□□□ 1.63
TNFRSF1A-212ENST00000539372 MYBBP1AQ9BQG0 1328 aaKnown RBP25.22■■□□□ 1.63
TNFRSF1A-212ENST00000539372 AFDNP55196 1824 aaKnown RBP25.22■■□□□ 1.63
TNFRSF1A-212ENST00000539372 DALRD3Q5D0E6 543 aaKnown RBP25.22■■□□□ 1.63
TNFRSF1A-212ENST00000539372 ZNF526Q8TF50 670 aaPredicted RBP25.22■■□□□ 1.63
TNFRSF1A-212ENST00000539372 SCN7AQ01118 1682 aa25.21■■□□□ 1.63
TNFRSF1A-212ENST00000539372 NRXN2Q9P2S2 1712 aa25.2■■□□□ 1.63
TNFRSF1A-212ENST00000539372 CAMTA2O94983 1202 aa25.2■■□□□ 1.62
TNFRSF1A-212ENST00000539372 DZIP3Q86Y13 1208 aaKnown RBP25.2■■□□□ 1.62
TNFRSF1A-212ENST00000539372 C1QTNF8P60827 252 aa25.19■■□□□ 1.62
TNFRSF1A-212ENST00000539372 CARMIL3Q8ND23 1372 aa25.18■■□□□ 1.62
TNFRSF1A-212ENST00000539372 PNISRQ8TF01 805 aaKnown RBP25.18■■□□□ 1.62
TNFRSF1A-212ENST00000539372 NBPF26B4DH59 902 aa25.17■■□□□ 1.62
TNFRSF1A-212ENST00000539372 NBPF10Q6P3W6 841 aaKnown RBP25.17■■□□□ 1.62
TNFRSF1A-212ENST00000539372 NBPF15Q8N660 670 aa25.17■■□□□ 1.62
TNFRSF1A-212ENST00000539372 GPBP1L1Q9HC44 474 aaPredicted RBP25.17■■□□□ 1.62
TNFRSF1A-212ENST00000539372 CCDC24Q8N4L8 307 aa25.16■■□□□ 1.62
TNFRSF1A-212ENST00000539372 RIPK4P57078 832 aa25.15■■□□□ 1.62
TNFRSF1A-212ENST00000539372 C2CD5Q86YS7 1000 aa25.15■■□□□ 1.62
TNFRSF1A-212ENST00000539372 SETDB2Q96T68 719 aa25.15■■□□□ 1.62
TNFRSF1A-212ENST00000539372 ARFGEF1Q9Y6D6 1849 aa25.14■■□□□ 1.62
TNFRSF1A-212ENST00000539372 KDM3BQ7LBC6 1761 aa25.14■■□□□ 1.62
TNFRSF1A-212ENST00000539372 CCDC146Q8IYE0 955 aa25.14■■□□□ 1.62
TNFRSF1A-212ENST00000539372 EIF4A1P60842 406 aaKnown RBP25.13■■□□□ 1.61
TNFRSF1A-212ENST00000539372 PRR5LQ6MZQ0 368 aa25.13■■□□□ 1.61
TNFRSF1A-212ENST00000539372 BCORQ6W2J9 1755 aa25.13■■□□□ 1.61
TNFRSF1A-212ENST00000539372 H0YIN7 160 aa25.12■■□□□ 1.61
TNFRSF1A-212ENST00000539372 RRP7AQ9Y3A4 280 aaKnown RBP25.12■■□□□ 1.61
TNFRSF1A-212ENST00000539372 NPHP1O15259 732 aa25.11■■□□□ 1.61
TNFRSF1A-212ENST00000539372 TMPOP42166 694 aaKnown RBP25.11■■□□□ 1.61
TNFRSF1A-212ENST00000539372 WDR43Q15061 677 aaKnown RBP eCLIP25.1■■□□□ 1.61
TNFRSF1A-212ENST00000539372 C9orf131Q5VYM1 1079 aa25.1■■□□□ 1.61
TNFRSF1A-212ENST00000539372 CNBD1Q8NA66 436 aa25.1■■□□□ 1.61
TNFRSF1A-212ENST00000539372 TSPYL4Q9UJ04 414 aa25.1■■□□□ 1.61
TNFRSF1A-212ENST00000539372 LAMB4A4D0S4 1761 aa25.1■■□□□ 1.61
TNFRSF1A-212ENST00000539372 NEUROD2Q15784 382 aa25.09■■□□□ 1.61
TNFRSF1A-212ENST00000539372 NGEFQ8N5V2 710 aa25.09■■□□□ 1.61
TNFRSF1A-212ENST00000539372 TTLL6Q8N841 843 aa25.09■■□□□ 1.61
TNFRSF1A-212ENST00000539372 BRIP1Q9BX63 1249 aa25.09■■□□□ 1.61
TNFRSF1A-212ENST00000539372 PRKRIP1Q9H875 184 aaPredicted RBP25.09■■□□□ 1.61
TNFRSF1A-212ENST00000539372 ZNF652Q9Y2D9 606 aa25.09■■□□□ 1.61
TNFRSF1A-212ENST00000539372 PDE6BP35913 854 aa25.08■■□□□ 1.61
TNFRSF1A-212ENST00000539372 CLEC4GQ6UXB4 293 aa25.08■■□□□ 1.61
TNFRSF1A-212ENST00000539372 ANKRD31Q8N7Z5 1873 aa25.08■■□□□ 1.61
TNFRSF1A-212ENST00000539372 DLEC1Q9Y238 1755 aa25.08■■□□□ 1.6
TNFRSF1A-212ENST00000539372 SENP3-EIF4A1A0A087X0R7 540 aa25.07■■□□□ 1.6
TNFRSF1A-212ENST00000539372 ZNF622Q969S3 477 aaKnown RBP eCLIP25.07■■□□□ 1.6
TNFRSF1A-212ENST00000539372 ST5P78524 1137 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms