RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 KDM5AP29375 1690 aaKnown RBP13□□□□□ -0.33
DDX11-213ENST00000539049 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
DDX11-213ENST00000539049 KANK1Q14678 1352 aa12.99□□□□□ -0.33
DDX11-213ENST00000539049 BMP2KLQ5H9B9 411 aa12.99□□□□□ -0.33
DDX11-213ENST00000539049 ZBTB12Q9Y330 459 aaPredicted RBP12.99□□□□□ -0.33
DDX11-213ENST00000539049 CLTCL1P53675 1640 aa12.99□□□□□ -0.33
DDX11-213ENST00000539049 HDAC1Q13547 482 aaPredicted RBP12.99□□□□□ -0.33
DDX11-213ENST00000539049 CCDC183Q5T5S1 534 aa12.99□□□□□ -0.33
DDX11-213ENST00000539049 ST18O60284 1047 aa12.98□□□□□ -0.33
DDX11-213ENST00000539049 LRMPQ12912 555 aa12.98□□□□□ -0.33
DDX11-213ENST00000539049 SUGP1Q8IWZ8 645 aaKnown RBP12.98□□□□□ -0.33
DDX11-213ENST00000539049 SSH1Q8WYL5 1049 aa12.98□□□□□ -0.33
DDX11-213ENST00000539049 ERVK-7P63135 1459 aa12.98□□□□□ -0.33
DDX11-213ENST00000539049 SLU7O95391 586 aaKnown RBP12.98□□□□□ -0.33
DDX11-213ENST00000539049 CCDC186Q7Z3E2 898 aa12.98□□□□□ -0.33
DDX11-213ENST00000539049 LMAN1P49257 510 aa12.98□□□□□ -0.33
DDX11-213ENST00000539049 TMEM57Q8N5G2 664 aa12.98□□□□□ -0.33
DDX11-213ENST00000539049 PTPRTO14522 1441 aa12.98□□□□□ -0.33
DDX11-213ENST00000539049 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
DDX11-213ENST00000539049 NSD3Q9BZ95 1437 aa12.97□□□□□ -0.33
DDX11-213ENST00000539049 GDPD2Q9HCC8 539 aa12.97□□□□□ -0.33
DDX11-213ENST00000539049 EXOC6BQ9Y2D4 811 aa12.97□□□□□ -0.33
DDX11-213ENST00000539049 CLCN6P51797 869 aa12.97□□□□□ -0.33
DDX11-213ENST00000539049 LEKR1Q6ZMV7 388 aa12.97□□□□□ -0.33
DDX11-213ENST00000539049 MMS22LQ6ZRQ5 1243 aa12.97□□□□□ -0.33
DDX11-213ENST00000539049 ZNF526Q8TF50 670 aaPredicted RBP12.97□□□□□ -0.33
DDX11-213ENST00000539049 TMCO3Q6UWJ1 677 aa12.97□□□□□ -0.33
DDX11-213ENST00000539049 ABCC1P33527 1531 aa12.96□□□□□ -0.33
DDX11-213ENST00000539049 GADD45BO75293 160 aaPredicted RBP12.96□□□□□ -0.33
DDX11-213ENST00000539049 NBPF9Q3BBW0 867 aa12.96□□□□□ -0.33
DDX11-213ENST00000539049 ARGLU1Q9NWB6 273 aaPredicted RBP12.96□□□□□ -0.33
DDX11-213ENST00000539049 CEP152O94986 1710 aa12.96□□□□□ -0.33
DDX11-213ENST00000539049 IVLP07476 585 aa12.96□□□□□ -0.33
DDX11-213ENST00000539049 CFAP44Q96MT7 982 aa12.96□□□□□ -0.33
DDX11-213ENST00000539049 CEP89Q96ST8 783 aa12.96□□□□□ -0.33
DDX11-213ENST00000539049 POLR3AO14802 1390 aaPredicted RBP12.96□□□□□ -0.33
DDX11-213ENST00000539049 EIF3CLB5ME19 914 aaKnown RBP12.96□□□□□ -0.34
DDX11-213ENST00000539049 AP5Z1O43299 807 aa12.96□□□□□ -0.34
DDX11-213ENST00000539049 H2AFXP16104 143 aaPredicted RBP12.96□□□□□ -0.34
DDX11-213ENST00000539049 PTPN14Q15678 1187 aa12.96□□□□□ -0.34
DDX11-213ENST00000539049 EIF3CQ99613 913 aaKnown RBP12.96□□□□□ -0.34
DDX11-213ENST00000539049 NBPF11Q86T75 865 aa12.95□□□□□ -0.34
DDX11-213ENST00000539049 H0YHG0 523 aa12.95□□□□□ -0.34
DDX11-213ENST00000539049 OAS2P29728 719 aaKnown RBP12.95□□□□□ -0.34
DDX11-213ENST00000539049 SARNPP82979 210 aaKnown RBP12.95□□□□□ -0.34
DDX11-213ENST00000539049 TRDNQ13061 729 aa12.95□□□□□ -0.34
DDX11-213ENST00000539049 ERCC6LQ2NKX8 1250 aa12.95□□□□□ -0.34
DDX11-213ENST00000539049 ZCCHC17Q9NP64 241 aaKnown RBP12.95□□□□□ -0.34
DDX11-213ENST00000539049 MIS18AQ9NYP9 233 aa12.95□□□□□ -0.34
DDX11-213ENST00000539049 MPHOSPH10O00566 681 aaKnown RBP12.94□□□□□ -0.34
DDX11-213ENST00000539049 PRKAR2BP31323 418 aa12.94□□□□□ -0.34
DDX11-213ENST00000539049 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
DDX11-213ENST00000539049 DNAAF4Q8WXU2 420 aa12.94□□□□□ -0.34
DDX11-213ENST00000539049 TRIM27P14373 513 aa12.94□□□□□ -0.34
DDX11-213ENST00000539049 ACTN2P35609 894 aa12.94□□□□□ -0.34
DDX11-213ENST00000539049 CHD1LQ86WJ1 897 aa12.94□□□□□ -0.34
DDX11-213ENST00000539049 FAM83GA6ND36 823 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 SMARCA5O60264 1052 aaPredicted RBP12.93□□□□□ -0.34
DDX11-213ENST00000539049 MX1P20591 662 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 MNAT1P51948 309 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 NUCB1Q02818 461 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 RRS1Q15050 365 aaKnown RBP12.93□□□□□ -0.34
DDX11-213ENST00000539049 NBPF10Q6P3W6 841 aaKnown RBP12.93□□□□□ -0.34
DDX11-213ENST00000539049 LTV1Q96GA3 475 aaPredicted RBP12.93□□□□□ -0.34
DDX11-213ENST00000539049 JMYQ8N9B5 988 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 PRAM1Q96QH2 718 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 CABP1Q9NZU7 370 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 UGGT1Q9NYU2 1555 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 TTC36A6NLP5 189 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 KIF2AO00139 706 aaPredicted RBP12.93□□□□□ -0.34
DDX11-213ENST00000539049 CDC45O75419 566 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 WAPLQ7Z5K2 1190 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 TERF2IPQ9NYB0 399 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 ATAD2Q6PL18 1390 aa12.93□□□□□ -0.34
DDX11-213ENST00000539049 KIF3CO14782 793 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 ZRSR1Q15695 479 aaKnown RBP12.92□□□□□ -0.34
DDX11-213ENST00000539049 ZSCAN25Q6NSZ9 544 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 USP48Q86UV5 1035 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 ZRANB1Q9UGI0 708 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 CCDC171Q6TFL3 1326 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 ARHGAP29Q52LW3 1261 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 NBPF6Q5VWK0 638 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 TSHZ3Q63HK5 1081 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 NBPF5PQ86XG9 351 aaPredicted RBP12.92□□□□□ -0.34
DDX11-213ENST00000539049 IQUBQ8NA54 791 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 NBPF4Q96M43 638 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 NCKAP5LQ9HCH0 1330 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 KRT24Q2M2I5 525 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 MAP9Q49MG5 647 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 NUTM2GQ5VZR2 741 aa12.92□□□□□ -0.34
DDX11-213ENST00000539049 BRD1O95696 1058 aa12.91□□□□□ -0.34
DDX11-213ENST00000539049 TPM1P09493 284 aa12.91□□□□□ -0.34
DDX11-213ENST00000539049 ZFYVE16Q7Z3T8 1539 aa12.91□□□□□ -0.34
DDX11-213ENST00000539049 EXOC4Q96A65 974 aa12.91□□□□□ -0.34
DDX11-213ENST00000539049 FILIP1Q7Z7B0 1213 aa12.91□□□□□ -0.34
DDX11-213ENST00000539049 DDX19BQ9UMR2 479 aa12.91□□□□□ -0.34
DDX11-213ENST00000539049 GIMAP6Q6P9H5 292 aa12.9□□□□□ -0.34
DDX11-213ENST00000539049 WDR63Q8IWG1 891 aa12.9□□□□□ -0.34
DDX11-213ENST00000539049 USP26Q9BXU7 913 aa12.9□□□□□ -0.34
DDX11-213ENST00000539049 PDRG1Q9NUG6 133 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms