RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 TBC1D9Q6ZT07 1266 aa25.56■■□□□ 1.68
SMPDL3A-203ENST00000539041 UBR2Q8IWV8 1755 aa25.55■■□□□ 1.68
SMPDL3A-203ENST00000539041 PROSER3Q2NL68 480 aa25.55■■□□□ 1.68
SMPDL3A-203ENST00000539041 TOM1L2Q6ZVM7 507 aa25.55■■□□□ 1.68
SMPDL3A-203ENST00000539041 OTUD7AQ8TE49 926 aaPredicted RBP25.55■■□□□ 1.68
SMPDL3A-203ENST00000539041 DDX21Q9NR30 783 aaKnown RBP eCLIP25.55■■□□□ 1.68
SMPDL3A-203ENST00000539041 EXOC6BQ9Y2D4 811 aa25.54■■□□□ 1.68
SMPDL3A-203ENST00000539041 IBTKQ9P2D0 1353 aaPredicted RBP25.54■■□□□ 1.68
SMPDL3A-203ENST00000539041 KSR2Q6VAB6 950 aa25.54■■□□□ 1.68
SMPDL3A-203ENST00000539041 BCL11AQ9H165 835 aa25.54■■□□□ 1.68
SMPDL3A-203ENST00000539041 GLI3P10071 1580 aa25.53■■□□□ 1.68
SMPDL3A-203ENST00000539041 PAPPAQ13219 1627 aa25.53■■□□□ 1.68
SMPDL3A-203ENST00000539041 EIF5BO60841 1220 aaKnown RBP25.53■■□□□ 1.68
SMPDL3A-203ENST00000539041 RBM25P49756 843 aaKnown RBP25.53■■□□□ 1.68
SMPDL3A-203ENST00000539041 AFDNP55196 1824 aaKnown RBP25.53■■□□□ 1.68
SMPDL3A-203ENST00000539041 AK9Q5TCS8 1911 aa25.52■■□□□ 1.68
SMPDL3A-203ENST00000539041 ALDH1L1O75891 902 aa25.52■■□□□ 1.68
SMPDL3A-203ENST00000539041 SSH3Q8TE77 659 aa25.52■■□□□ 1.68
SMPDL3A-203ENST00000539041 LRRCC1Q9C099 1032 aa25.52■■□□□ 1.68
SMPDL3A-203ENST00000539041 MAP3K2Q9Y2U5 619 aa25.52■■□□□ 1.68
SMPDL3A-203ENST00000539041 ROBO1Q9Y6N7 1651 aa25.51■■□□□ 1.67
SMPDL3A-203ENST00000539041 PCDH11XQ9BZA7 1347 aa25.51■■□□□ 1.67
SMPDL3A-203ENST00000539041 PCDH11YQ9BZA8 1340 aa25.51■■□□□ 1.67
SMPDL3A-203ENST00000539041 TTC5Q8N0Z6 440 aa25.51■■□□□ 1.67
SMPDL3A-203ENST00000539041 OSBPL3Q9H4L5 887 aa25.51■■□□□ 1.67
SMPDL3A-203ENST00000539041 DDX58O95786 925 aaKnown RBP25.5■■□□□ 1.67
SMPDL3A-203ENST00000539041 CABP4P57796 275 aa25.5■■□□□ 1.67
SMPDL3A-203ENST00000539041 CARD10Q9BWT7 1032 aa25.5■■□□□ 1.67
SMPDL3A-203ENST00000539041 ARFGEF2Q9Y6D5 1785 aa25.49■■□□□ 1.67
SMPDL3A-203ENST00000539041 NBPF7P0C2Y1 421 aaPredicted RBP25.49■■□□□ 1.67
SMPDL3A-203ENST00000539041 PDIA6Q15084 440 aa25.49■■□□□ 1.67
SMPDL3A-203ENST00000539041 ZCRB1Q8TBF4 217 aaKnown RBP25.49■■□□□ 1.67
SMPDL3A-203ENST00000539041 ZNF496Q96IT1 587 aaPredicted RBP25.49■■□□□ 1.67
SMPDL3A-203ENST00000539041 POLA2Q14181 598 aa25.49■■□□□ 1.67
SMPDL3A-203ENST00000539041 COL14A1Q05707 1796 aaKnown RBP25.48■■□□□ 1.67
SMPDL3A-203ENST00000539041 PPP1R42Q7Z4L9 355 aa25.48■■□□□ 1.67
SMPDL3A-203ENST00000539041 TBC1D2Q9BYX2 928 aa25.48■■□□□ 1.67
SMPDL3A-203ENST00000539041 PDE1AP54750 535 aa25.47■■□□□ 1.67
SMPDL3A-203ENST00000539041 RTL5Q5HYW3 569 aaPredicted RBP25.47■■□□□ 1.67
SMPDL3A-203ENST00000539041 FMNL2Q96PY5 1086 aa25.47■■□□□ 1.67
SMPDL3A-203ENST00000539041 SALL3Q9BXA9 1300 aa25.47■■□□□ 1.67
SMPDL3A-203ENST00000539041 COL22A1Q8NFW1 1626 aaPredicted RBP25.47■■□□□ 1.67
SMPDL3A-203ENST00000539041 SNRPA1P09661 255 aaKnown RBP25.46■■□□□ 1.67
SMPDL3A-203ENST00000539041 IL2RBP14784 551 aa25.46■■□□□ 1.67
SMPDL3A-203ENST00000539041 TOGARAM1Q9Y4F4 1720 aa25.46■■□□□ 1.67
SMPDL3A-203ENST00000539041 AHDC1Q5TGY3 1603 aaPredicted RBP25.46■■□□□ 1.67
SMPDL3A-203ENST00000539041 SDSP20132 328 aa25.46■■□□□ 1.67
SMPDL3A-203ENST00000539041 RAB11FIP3O75154 756 aa25.45■■□□□ 1.66
SMPDL3A-203ENST00000539041 HDAC5Q9UQL6 1122 aa25.45■■□□□ 1.66
SMPDL3A-203ENST00000539041 LINS1Q8NG48 757 aa25.44■■□□□ 1.66
SMPDL3A-203ENST00000539041 STRN4Q9NRL3 753 aa25.44■■□□□ 1.66
SMPDL3A-203ENST00000539041 EVA1CP58658 441 aa25.44■■□□□ 1.66
SMPDL3A-203ENST00000539041 C9orf78Q9NZ63 289 aaPredicted RBP25.44■■□□□ 1.66
SMPDL3A-203ENST00000539041 SRGAP3O43295 1099 aa25.43■■□□□ 1.66
SMPDL3A-203ENST00000539041 AIMP1Q12904 312 aaKnown RBP25.43■■□□□ 1.66
SMPDL3A-203ENST00000539041 LARP1Q6PKG0 1096 aaKnown RBP25.43■■□□□ 1.66
SMPDL3A-203ENST00000539041 USP35Q9P2H5 1018 aa25.43■■□□□ 1.66
SMPDL3A-203ENST00000539041 WNK3Q9BYP7 1800 aa25.42■■□□□ 1.66
SMPDL3A-203ENST00000539041 NKX1-1Q15270 411 aaPredicted RBP25.42■■□□□ 1.66
SMPDL3A-203ENST00000539041 CASC1Q6TDU7 716 aa25.42■■□□□ 1.66
SMPDL3A-203ENST00000539041 ERVV-2B6SEH9 535 aa25.41■■□□□ 1.66
SMPDL3A-203ENST00000539041 MX1P20591 662 aa25.41■■□□□ 1.66
SMPDL3A-203ENST00000539041 MTX1Q13505 466 aa25.41■■□□□ 1.66
SMPDL3A-203ENST00000539041 CWF19L2Q2TBE0 894 aaKnown RBP25.41■■□□□ 1.66
SMPDL3A-203ENST00000539041 PLCH1Q4KWH8 1693 aa25.41■■□□□ 1.66
SMPDL3A-203ENST00000539041 SURF6O75683 361 aaKnown RBP25.41■■□□□ 1.66
SMPDL3A-203ENST00000539041 MYL6BP14649 208 aa25.41■■□□□ 1.66
SMPDL3A-203ENST00000539041 RIC3Q7Z5B4 369 aa25.41■■□□□ 1.66
SMPDL3A-203ENST00000539041 USP16Q9Y5T5 823 aa25.41■■□□□ 1.66
SMPDL3A-203ENST00000539041 ITGB4P16144 1822 aa25.4■■□□□ 1.66
SMPDL3A-203ENST00000539041 UTYO14607 1347 aa25.4■■□□□ 1.66
SMPDL3A-203ENST00000539041 XAGE3Q8WTP9 111 aa25.4■■□□□ 1.66
SMPDL3A-203ENST00000539041 KCPQ6ZWJ8 1503 aa25.4■■□□□ 1.66
SMPDL3A-203ENST00000539041 COL16A1Q07092 1604 aaPredicted RBP25.4■■□□□ 1.66
SMPDL3A-203ENST00000539041 AOX1Q06278 1338 aa25.39■■□□□ 1.66
SMPDL3A-203ENST00000539041 NUP188Q5SRE5 1749 aa25.39■■□□□ 1.66
SMPDL3A-203ENST00000539041 STAP2Q9UGK3 403 aa25.39■■□□□ 1.66
SMPDL3A-203ENST00000539041 HSP90AB4PQ58FF6 505 aa25.39■■□□□ 1.65
SMPDL3A-203ENST00000539041 GRM8O00222 908 aa25.38■■□□□ 1.65
SMPDL3A-203ENST00000539041 COPS6Q7L5N1 327 aa25.38■■□□□ 1.65
SMPDL3A-203ENST00000539041 LRP10Q7Z4F1 713 aa25.38■■□□□ 1.65
SMPDL3A-203ENST00000539041 HSCBQ8IWL3 235 aa25.38■■□□□ 1.65
SMPDL3A-203ENST00000539041 NEXNQ0ZGT2 675 aa25.37■■□□□ 1.65
SMPDL3A-203ENST00000539041 RHPN1Q8TCX5 695 aa25.37■■□□□ 1.65
SMPDL3A-203ENST00000539041 SNX21Q969T3 373 aa25.37■■□□□ 1.65
SMPDL3A-203ENST00000539041 KIF1BPQ96EK5 621 aa25.37■■□□□ 1.65
SMPDL3A-203ENST00000539041 NFKBIBQ15653 356 aa25.36■■□□□ 1.65
SMPDL3A-203ENST00000539041 KIF2CQ99661 725 aa25.36■■□□□ 1.65
SMPDL3A-203ENST00000539041 METTL22Q9BUU2 404 aaPredicted RBP25.36■■□□□ 1.65
SMPDL3A-203ENST00000539041 ERBB4Q15303 1308 aa25.35■■□□□ 1.65
SMPDL3A-203ENST00000539041 LTBP4Q8N2S1 1624 aa25.35■■□□□ 1.65
SMPDL3A-203ENST00000539041 IGKV5-2P06315 115 aa25.35■■□□□ 1.65
SMPDL3A-203ENST00000539041 IL1RAPL2Q9NP60 686 aa25.35■■□□□ 1.65
SMPDL3A-203ENST00000539041 DDX54Q8TDD1 881 aaKnown RBP25.34■■□□□ 1.65
SMPDL3A-203ENST00000539041 SLKQ9H2G2 1235 aaPredicted RBP25.34■■□□□ 1.65
SMPDL3A-203ENST00000539041 TNS2Q63HR2 1409 aa25.34■■□□□ 1.65
SMPDL3A-203ENST00000539041 TSHZ3Q63HK5 1081 aa25.33■■□□□ 1.65
SMPDL3A-203ENST00000539041 ANKRD13DQ6ZTN6 518 aa25.33■■□□□ 1.65
SMPDL3A-203ENST00000539041 SUCLG2Q96I99 432 aa25.33■■□□□ 1.65
SMPDL3A-203ENST00000539041 PHLPP1O60346 1717 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms