RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 PEAK1Q9H792 1746 aa6.89□□□□□ -1.31
LINC02408-202ENST00000538573 SHPRHQ149N8 1683 aa6.88□□□□□ -1.31
LINC02408-202ENST00000538573 PHRF1Q9P1Y6 1649 aaKnown RBP6.88□□□□□ -1.31
LINC02408-202ENST00000538573 NFAT5O94916 1531 aa6.88□□□□□ -1.31
LINC02408-202ENST00000538573 CDK12Q9NYV4 1490 aaPredicted RBP6.88□□□□□ -1.31
LINC02408-202ENST00000538573 SMG6Q86US8 1419 aaKnown RBP6.88□□□□□ -1.31
LINC02408-202ENST00000538573 INSRP06213 1382 aa6.88□□□□□ -1.31
LINC02408-202ENST00000538573 FLT4P35916 1363 aa6.88□□□□□ -1.31
LINC02408-202ENST00000538573 SENP3-EIF4A1A0A087X0R7 540 aa6.88□□□□□ -1.31
LINC02408-202ENST00000538573 HOXC9P31274 260 aa6.88□□□□□ -1.31
LINC02408-202ENST00000538573 IL13P35225 146 aa6.88□□□□□ -1.31
LINC02408-202ENST00000538573 HNRNPUQ00839 825 aaKnown RBP eCLIP6.88□□□□□ -1.31
LINC02408-202ENST00000538573 TRAF7Q6Q0C0 670 aa6.88□□□□□ -1.31
LINC02408-202ENST00000538573 ARHGEF25Q86VW2 580 aa6.88□□□□□ -1.31
LINC02408-202ENST00000538573 IP6K1Q92551 441 aa6.88□□□□□ -1.31
LINC02408-202ENST00000538573 TATDN2Q93075 761 aa6.88□□□□□ -1.31
LINC02408-202ENST00000538573 ARIH1Q9Y4X5 557 aaPredicted RBP6.88□□□□□ -1.31
LINC02408-202ENST00000538573 CRYBG1Q9Y4K1 1723 aa6.87□□□□□ -1.31
LINC02408-202ENST00000538573 COL16A1Q07092 1604 aaPredicted RBP6.87□□□□□ -1.31
LINC02408-202ENST00000538573 COL3A1P02461 1466 aaPredicted RBP6.87□□□□□ -1.31
LINC02408-202ENST00000538573 KIF24Q5T7B8 1368 aa6.87□□□□□ -1.31
LINC02408-202ENST00000538573 NUTM2BA6NNL0 878 aaPredicted RBP6.87□□□□□ -1.31
LINC02408-202ENST00000538573 NUTM2EB1AL46 878 aaPredicted RBP6.87□□□□□ -1.31
LINC02408-202ENST00000538573 SLC4A3P48751 1232 aa6.87□□□□□ -1.31
LINC02408-202ENST00000538573 EIF4A2Q14240 407 aaKnown RBP6.87□□□□□ -1.31
LINC02408-202ENST00000538573 CHRNA2Q15822 529 aa6.87□□□□□ -1.31
LINC02408-202ENST00000538573 NUTM2AQ8IVF1 878 aaPredicted RBP6.87□□□□□ -1.31
LINC02408-202ENST00000538573 CCDC146Q8IYE0 955 aa6.87□□□□□ -1.31
LINC02408-202ENST00000538573 PRDM11Q9NQV5 511 aa6.87□□□□□ -1.31
LINC02408-202ENST00000538573 RGPD5Q99666 1765 aa6.87□□□□□ -1.31
LINC02408-202ENST00000538573 RTL1A6NKG5 1358 aa6.86□□□□□ -1.31
LINC02408-202ENST00000538573 KIAA0232Q92628 1395 aa6.86□□□□□ -1.31
LINC02408-202ENST00000538573 HMOX1P09601 288 aa6.86□□□□□ -1.31
LINC02408-202ENST00000538573 HSPA1LP34931 641 aa6.86□□□□□ -1.31
LINC02408-202ENST00000538573 NUDT18Q6ZVK8 323 aa6.86□□□□□ -1.31
LINC02408-202ENST00000538573 PNNQ9H307 717 aaKnown RBP6.86□□□□□ -1.31
LINC02408-202ENST00000538573 SALL2Q9Y467 1007 aaPredicted RBP6.86□□□□□ -1.31
LINC02408-202ENST00000538573 ABCA3Q99758 1704 aa6.85□□□□□ -1.31
LINC02408-202ENST00000538573 FCHSD2O94868 740 aa6.85□□□□□ -1.31
LINC02408-202ENST00000538573 ADAMTS2O95450 1211 aa6.85□□□□□ -1.31
LINC02408-202ENST00000538573 NEFMP07197 916 aa6.85□□□□□ -1.31
LINC02408-202ENST00000538573 CSB-PGBD3P0DP91 1061 aa6.85□□□□□ -1.31
LINC02408-202ENST00000538573 OSBPP22059 807 aa6.85□□□□□ -1.31
LINC02408-202ENST00000538573 SULT6B1Q6IMI4 303 aa6.85□□□□□ -1.31
LINC02408-202ENST00000538573 ANKRD24Q8TF21 1146 aa6.85□□□□□ -1.31
LINC02408-202ENST00000538573 NECTIN2Q92692 538 aa6.85□□□□□ -1.31
LINC02408-202ENST00000538573 RUNDC1Q96C34 613 aa6.85□□□□□ -1.31
LINC02408-202ENST00000538573 EYA1Q99502 592 aa6.85□□□□□ -1.31
LINC02408-202ENST00000538573 COL22A1Q8NFW1 1626 aaPredicted RBP6.85□□□□□ -1.31
LINC02408-202ENST00000538573 CPDO75976 1380 aa6.84□□□□□ -1.31
LINC02408-202ENST00000538573 MAPK8IP3Q9UPT6 1336 aa6.84□□□□□ -1.31
LINC02408-202ENST00000538573 FAM83GA6ND36 823 aa6.84□□□□□ -1.31
LINC02408-202ENST00000538573 APAF1O14727 1248 aa6.84□□□□□ -1.31
LINC02408-202ENST00000538573 GFRA3O60609 400 aa6.84□□□□□ -1.31
LINC02408-202ENST00000538573 PRKAR2BP31323 418 aa6.84□□□□□ -1.31
LINC02408-202ENST00000538573 EVA1CP58658 441 aa6.84□□□□□ -1.31
LINC02408-202ENST00000538573 FAM198AQ9UFP1 575 aa6.84□□□□□ -1.31
LINC02408-202ENST00000538573 RGPD2P0DJD1 1756 aa6.84□□□□□ -1.31
LINC02408-202ENST00000538573 COL18A1P39060 1754 aa6.84□□□□□ -1.31
LINC02408-202ENST00000538573 BLMP54132 1417 aaPredicted RBP6.84□□□□□ -1.32
LINC02408-202ENST00000538573 JCADQ9P266 1359 aa6.83□□□□□ -1.32
LINC02408-202ENST00000538573 NEUROD2Q15784 382 aa6.83□□□□□ -1.32
LINC02408-202ENST00000538573 NBPF6Q5VWK0 638 aa6.83□□□□□ -1.32
LINC02408-202ENST00000538573 AEBP1Q8IUX7 1158 aa6.83□□□□□ -1.32
LINC02408-202ENST00000538573 TCP11L2Q8N4U5 519 aa6.83□□□□□ -1.32
LINC02408-202ENST00000538573 USHBP1Q8N6Y0 703 aa6.83□□□□□ -1.32
LINC02408-202ENST00000538573 NBPF4Q96M43 638 aa6.83□□□□□ -1.32
LINC02408-202ENST00000538573 RSPH6AQ9H0K4 717 aa6.83□□□□□ -1.32
LINC02408-202ENST00000538573 BCL11AQ9H165 835 aa6.83□□□□□ -1.32
LINC02408-202ENST00000538573 CDHR5Q9HBB8 845 aa6.83□□□□□ -1.32
LINC02408-202ENST00000538573 IL21Q9HBE4 155 aa6.83□□□□□ -1.32
LINC02408-202ENST00000538573 NLRP2Q9NX02 1062 aa6.83□□□□□ -1.32
LINC02408-202ENST00000538573 RGPD1P0DJD0 1748 aa6.82□□□□□ -1.32
LINC02408-202ENST00000538573 PRIM1P49642 420 aaKnown RBP6.82□□□□□ -1.32
LINC02408-202ENST00000538573 PHACTR3Q96KR7 559 aa6.82□□□□□ -1.32
LINC02408-202ENST00000538573 PLEKHF1Q96S99 279 aa6.82□□□□□ -1.32
LINC02408-202ENST00000538573 STRN4Q9NRL3 753 aa6.82□□□□□ -1.32
LINC02408-202ENST00000538573 BTG4Q9NY30 223 aa6.82□□□□□ -1.32
LINC02408-202ENST00000538573 RBM27Q9P2N5 1060 aaKnown RBP6.82□□□□□ -1.32
LINC02408-202ENST00000538573 RRP7AQ9Y3A4 280 aaKnown RBP6.82□□□□□ -1.32
LINC02408-202ENST00000538573 SPATA31A6Q5VVP1 1343 aa6.81□□□□□ -1.32
LINC02408-202ENST00000538573 IGSF1Q8N6C5 1336 aa6.81□□□□□ -1.32
LINC02408-202ENST00000538573 CAMTA1Q9Y6Y1 1673 aa6.81□□□□□ -1.32
LINC02408-202ENST00000538573 CENPBP07199 599 aaPredicted RBP6.81□□□□□ -1.32
LINC02408-202ENST00000538573 TOM1L2Q6ZVM7 507 aa6.81□□□□□ -1.32
LINC02408-202ENST00000538573 SLF2Q8IX21 1173 aa6.81□□□□□ -1.32
LINC02408-202ENST00000538573 COL14A1Q05707 1796 aaKnown RBP6.81□□□□□ -1.32
LINC02408-202ENST00000538573 ABCC6O95255 1503 aa6.81□□□□□ -1.32
LINC02408-202ENST00000538573 LMO7Q8WWI1 1683 aa6.81□□□□□ -1.32
LINC02408-202ENST00000538573 ZBED9Q6R2W3 1325 aa6.8□□□□□ -1.32
LINC02408-202ENST00000538573 WDR17Q8IZU2 1322 aa6.8□□□□□ -1.32
LINC02408-202ENST00000538573 TMPOP42166 694 aaKnown RBP6.8□□□□□ -1.32
LINC02408-202ENST00000538573 RIPK4P57078 832 aa6.8□□□□□ -1.32
LINC02408-202ENST00000538573 TJAP1Q5JTD0 557 aa6.8□□□□□ -1.32
LINC02408-202ENST00000538573 MEX3CQ5U5Q3 659 aaKnown RBP6.8□□□□□ -1.32
LINC02408-202ENST00000538573 LARP1Q6PKG0 1096 aaKnown RBP6.8□□□□□ -1.32
LINC02408-202ENST00000538573 PADI6Q6TGC4 694 aa6.8□□□□□ -1.32
LINC02408-202ENST00000538573 NGLY1Q96IV0 654 aa6.8□□□□□ -1.32
LINC02408-202ENST00000538573 C8orf37Q96NL8 207 aa6.8□□□□□ -1.32
LINC02408-202ENST00000538573 MTRQ99707 1265 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms