RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 RRP7AQ9Y3A4 280 aaKnown RBP30.6■■■□□ 2.49
CHFR-215ENST00000537551 LMOD3Q0VAK6 560 aa30.58■■■□□ 2.49
CHFR-215ENST00000537551 PNISRQ8TF01 805 aaKnown RBP30.58■■■□□ 2.49
CHFR-215ENST00000537551 COL24A1Q17RW2 1714 aa30.58■■■□□ 2.49
CHFR-215ENST00000537551 CCDC184Q52MB2 194 aa30.57■■■□□ 2.48
CHFR-215ENST00000537551 ZBTB1Q9Y2K1 713 aa30.57■■■□□ 2.48
CHFR-215ENST00000537551 CANXP27824 592 aaKnown RBP30.56■■■□□ 2.48
CHFR-215ENST00000537551 SOS1Q07889 1333 aaPredicted RBP30.54■■■□□ 2.48
CHFR-215ENST00000537551 DCAF8L1A6NGE4 600 aa30.54■■■□□ 2.48
CHFR-215ENST00000537551 NLGN1Q8N2Q7 840 aa30.54■■■□□ 2.48
CHFR-215ENST00000537551 SNRPA1P09661 255 aaKnown RBP30.53■■■□□ 2.48
CHFR-215ENST00000537551 MRS2Q9HD23 443 aa30.52■■■□□ 2.48
CHFR-215ENST00000537551 SRP68Q9UHB9 627 aaKnown RBP30.52■■■□□ 2.48
CHFR-215ENST00000537551 ZPR1O75312 459 aa30.51■■■□□ 2.47
CHFR-215ENST00000537551 GYS1P13807 737 aa30.51■■■□□ 2.47
CHFR-215ENST00000537551 USP16Q9Y5T5 823 aa30.5■■■□□ 2.47
CHFR-215ENST00000537551 USP42Q9H9J4 1324 aaKnown RBP30.49■■■□□ 2.47
CHFR-215ENST00000537551 PRAMEF22A3QJZ6 481 aa30.49■■■□□ 2.47
CHFR-215ENST00000537551 MMP10P09238 476 aa30.49■■■□□ 2.47
CHFR-215ENST00000537551 ZNF330Q9Y3S2 320 aaPredicted RBP30.49■■■□□ 2.47
CHFR-215ENST00000537551 COL15A1P39059 1388 aa30.49■■■□□ 2.47
CHFR-215ENST00000537551 A1BGP04217 495 aa30.48■■■□□ 2.47
CHFR-215ENST00000537551 NPM2Q86SE8 214 aaKnown RBP30.48■■■□□ 2.47
CHFR-215ENST00000537551 TSPYL4Q9UJ04 414 aa30.48■■■□□ 2.47
CHFR-215ENST00000537551 A0A087WZG4 1122 aa30.46■■■□□ 2.47
CHFR-215ENST00000537551 APAF1O14727 1248 aa30.46■■■□□ 2.47
CHFR-215ENST00000537551 USPL1Q5W0Q7 1092 aa30.46■■■□□ 2.47
CHFR-215ENST00000537551 TRIM35Q9UPQ4 493 aa30.46■■■□□ 2.47
CHFR-215ENST00000537551 C4AP0C0L4 1744 aa30.45■■■□□ 2.47
CHFR-215ENST00000537551 EIF5P55010 431 aaKnown RBP30.45■■■□□ 2.47
CHFR-215ENST00000537551 NARFQ9UHQ1 456 aa30.45■■■□□ 2.47
CHFR-215ENST00000537551 EIF4A1P60842 406 aaKnown RBP30.44■■■□□ 2.46
CHFR-215ENST00000537551 FKBP8Q14318 412 aa30.44■■■□□ 2.46
CHFR-215ENST00000537551 CD2APQ9Y5K6 639 aa30.44■■■□□ 2.46
CHFR-215ENST00000537551 IL6STP40189 918 aaPredicted RBP30.43■■■□□ 2.46
CHFR-215ENST00000537551 NLGN2Q8NFZ4 835 aa30.43■■■□□ 2.46
CHFR-215ENST00000537551 PARP3Q9Y6F1 533 aa30.43■■■□□ 2.46
CHFR-215ENST00000537551 BABAM1Q9NWV8 329 aa30.42■■■□□ 2.46
CHFR-215ENST00000537551 LAS1LQ9Y4W2 734 aaKnown RBP30.42■■■□□ 2.46
CHFR-215ENST00000537551 PIP4K2AP48426 406 aaPredicted RBP30.41■■■□□ 2.46
CHFR-215ENST00000537551 KDM3BQ7LBC6 1761 aa30.41■■■□□ 2.46
CHFR-215ENST00000537551 GIGYF1O75420 1035 aaPredicted RBP30.4■■■□□ 2.46
CHFR-215ENST00000537551 TBC1D2BQ9UPU7 963 aa30.39■■■□□ 2.46
CHFR-215ENST00000537551 PELP1Q8IZL8 1130 aaKnown RBP30.37■■■□□ 2.45
CHFR-215ENST00000537551 GPR162Q16538 588 aa30.35■■■□□ 2.45
CHFR-215ENST00000537551 CHL1O00533 1208 aa30.34■■■□□ 2.45
CHFR-215ENST00000537551 TM4SF1P30408 202 aa30.34■■■□□ 2.45
CHFR-215ENST00000537551 BCL2L12Q9HB09 334 aa30.34■■■□□ 2.45
CHFR-215ENST00000537551 NBPF26B4DH59 902 aa30.33■■■□□ 2.45
CHFR-215ENST00000537551 DDR1Q08345 913 aa30.33■■■□□ 2.45
CHFR-215ENST00000537551 NBPF10Q6P3W6 841 aaKnown RBP30.33■■■□□ 2.45
CHFR-215ENST00000537551 DZIP3Q86Y13 1208 aaKnown RBP30.33■■■□□ 2.45
CHFR-215ENST00000537551 NBPF15Q8N660 670 aa30.33■■■□□ 2.45
CHFR-215ENST00000537551 SENP3-EIF4A1A0A087X0R7 540 aa30.32■■■□□ 2.44
CHFR-215ENST00000537551 CALD1Q05682 793 aaKnown RBP30.32■■■□□ 2.44
CHFR-215ENST00000537551 NFIXQ14938 502 aa30.32■■■□□ 2.44
CHFR-215ENST00000537551 BICDL1Q6ZP65 573 aa30.31■■■□□ 2.44
CHFR-215ENST00000537551 POLRMTO00411 1230 aaKnown RBP30.3■■■□□ 2.44
CHFR-215ENST00000537551 FAM9BQ8IZU0 186 aa30.3■■■□□ 2.44
CHFR-215ENST00000537551 CFAP44Q96MT7 982 aa30.3■■■□□ 2.44
CHFR-215ENST00000537551 EIF2S2P20042 333 aaKnown RBP30.29■■■□□ 2.44
CHFR-215ENST00000537551 NGEFQ8N5V2 710 aa30.29■■■□□ 2.44
CHFR-215ENST00000537551 CAMTA2O94983 1202 aa30.28■■■□□ 2.44
CHFR-215ENST00000537551 LAMB4A4D0S4 1761 aa30.28■■■□□ 2.44
CHFR-215ENST00000537551 MYL6BP14649 208 aa30.26■■■□□ 2.43
CHFR-215ENST00000537551 TGFB2P61812 414 aa30.26■■■□□ 2.43
CHFR-215ENST00000537551 TBC1D9BQ66K14 1250 aa30.26■■■□□ 2.43
CHFR-215ENST00000537551 SERPINB2P05120 415 aa30.25■■■□□ 2.43
CHFR-215ENST00000537551 GNAI1P63096 354 aa30.25■■■□□ 2.43
CHFR-215ENST00000537551 C10orf71Q711Q0 1435 aa30.24■■■□□ 2.43
CHFR-215ENST00000537551 KRT24Q2M2I5 525 aa30.24■■■□□ 2.43
CHFR-215ENST00000537551 MBIPQ9NS73 344 aa30.24■■■□□ 2.43
CHFR-215ENST00000537551 IFT57Q9NWB7 429 aa30.24■■■□□ 2.43
CHFR-215ENST00000537551 WWC3Q9ULE0 1092 aa30.24■■■□□ 2.43
CHFR-215ENST00000537551 NECTIN2Q92692 538 aa30.23■■■□□ 2.43
CHFR-215ENST00000537551 ZNF652Q9Y2D9 606 aa30.23■■■□□ 2.43
CHFR-215ENST00000537551 ERBB4Q15303 1308 aa30.22■■■□□ 2.43
CHFR-215ENST00000537551 A0A0G2JLW4 131 aa30.22■■■□□ 2.43
CHFR-215ENST00000537551 ZNF853P0CG23 659 aa30.22■■■□□ 2.43
CHFR-215ENST00000537551 SETDB2Q96T68 719 aa30.22■■■□□ 2.43
CHFR-215ENST00000537551 CCDC27Q2M243 656 aa30.21■■■□□ 2.43
CHFR-215ENST00000537551 CLEC4GQ6UXB4 293 aa30.21■■■□□ 2.43
CHFR-215ENST00000537551 SALL2Q9Y467 1007 aaPredicted RBP30.21■■■□□ 2.43
CHFR-215ENST00000537551 SCN7AQ01118 1682 aa30.2■■■□□ 2.43
CHFR-215ENST00000537551 YBX3P16989 372 aaKnown RBP eCLIP30.2■■■□□ 2.43
CHFR-215ENST00000537551 GRIN3BO60391 1043 aa30.19■■■□□ 2.42
CHFR-215ENST00000537551 DPEP1P16444 411 aa30.19■■■□□ 2.42
CHFR-215ENST00000537551 KIF6Q6ZMV9 814 aa30.19■■■□□ 2.42
CHFR-215ENST00000537551 WWC1Q8IX03 1113 aa30.19■■■□□ 2.42
CHFR-215ENST00000537551 PXDNLA1KZ92 1463 aa30.18■■■□□ 2.42
CHFR-215ENST00000537551 KIF13BQ9NQT8 1826 aa30.17■■■□□ 2.42
CHFR-215ENST00000537551 NPHP1O15259 732 aa30.17■■■□□ 2.42
CHFR-215ENST00000537551 DUSP27Q5VZP5 1158 aa30.17■■■□□ 2.42
CHFR-215ENST00000537551 CARMIL3Q8ND23 1372 aa30.16■■■□□ 2.42
CHFR-215ENST00000537551 NCBP3Q53F19 620 aaKnown RBP30.16■■■□□ 2.42
CHFR-215ENST00000537551 TTLL7Q6ZT98 887 aa30.16■■■□□ 2.42
CHFR-215ENST00000537551 ANXA1P04083 346 aa30.15■■■□□ 2.42
CHFR-215ENST00000537551 HOXB7P09629 217 aa30.15■■■□□ 2.42
CHFR-215ENST00000537551 YY1P25490 414 aa30.15■■■□□ 2.42
CHFR-215ENST00000537551 PDIA6Q15084 440 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms