RNA–Protein interactions for RNA: ENST00000534626.6

RECQL4-208, Transcript of RecQ like helicase 4, humanhuman

TSL 5

Gene RECQL4, Length 1,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-208ENST00000534626 USPL1Q5W0Q7 1092 aa22.47■■□□□ 1.19
RECQL4-208ENST00000534626 AFDNP55196 1824 aaKnown RBP22.47■■□□□ 1.19
RECQL4-208ENST00000534626 GNAT3A8MTJ3 354 aa22.46■■□□□ 1.19
RECQL4-208ENST00000534626 STARD3NLO95772 234 aa22.46■■□□□ 1.19
RECQL4-208ENST00000534626 DALRD3Q5D0E6 543 aaKnown RBP22.46■■□□□ 1.19
RECQL4-208ENST00000534626 NARFQ9UHQ1 456 aa22.46■■□□□ 1.19
RECQL4-208ENST00000534626 SIPA1L3O60292 1781 aaPredicted RBP22.45■■□□□ 1.19
RECQL4-208ENST00000534626 POLRMTO00411 1230 aaKnown RBP22.45■■□□□ 1.18
RECQL4-208ENST00000534626 TM4SF1P30408 202 aa22.44■■□□□ 1.18
RECQL4-208ENST00000534626 ZBTB1Q9Y2K1 713 aa22.44■■□□□ 1.18
RECQL4-208ENST00000534626 A0A087WZG4 1122 aa22.43■■□□□ 1.18
RECQL4-208ENST00000534626 TEX13AQ9BXU3 409 aaPredicted RBP22.43■■□□□ 1.18
RECQL4-208ENST00000534626 NRXN2Q9P2S2 1712 aa22.43■■□□□ 1.18
RECQL4-208ENST00000534626 KCNA3P22001 575 aa22.42■■□□□ 1.18
RECQL4-208ENST00000534626 NUDCQ9Y266 331 aa22.42■■□□□ 1.18
RECQL4-208ENST00000534626 DLEC1Q9Y238 1755 aa22.41■■□□□ 1.18
RECQL4-208ENST00000534626 HSPA6P17066 643 aa22.41■■□□□ 1.18
RECQL4-208ENST00000534626 CANXP27824 592 aaKnown RBP22.41■■□□□ 1.18
RECQL4-208ENST00000534626 NFIXQ14938 502 aa22.4■■□□□ 1.18
RECQL4-208ENST00000534626 ZNF790Q6PG37 636 aa22.4■■□□□ 1.18
RECQL4-208ENST00000534626 NPM2Q86SE8 214 aaKnown RBP22.4■■□□□ 1.18
RECQL4-208ENST00000534626 KIF3CO14782 793 aa22.39■■□□□ 1.17
RECQL4-208ENST00000534626 CHRNA5P30532 468 aa22.39■■□□□ 1.17
RECQL4-208ENST00000534626 SBF1O95248 1867 aa22.39■■□□□ 1.17
RECQL4-208ENST00000534626 HEG1Q9ULI3 1381 aa22.38■■□□□ 1.17
RECQL4-208ENST00000534626 C9orf131Q5VYM1 1079 aa22.38■■□□□ 1.17
RECQL4-208ENST00000534626 IL17REQ8NFR9 667 aa22.38■■□□□ 1.17
RECQL4-208ENST00000534626 SCN7AQ01118 1682 aa22.38■■□□□ 1.17
RECQL4-208ENST00000534626 PRKAR2BP31323 418 aa22.37■■□□□ 1.17
RECQL4-208ENST00000534626 ZNF496Q96IT1 587 aaPredicted RBP22.37■■□□□ 1.17
RECQL4-208ENST00000534626 FMNL2Q96PY5 1086 aa22.37■■□□□ 1.17
RECQL4-208ENST00000534626 SERPINB2P05120 415 aa22.36■■□□□ 1.17
RECQL4-208ENST00000534626 TOMM70O94826 608 aa22.35■■□□□ 1.17
RECQL4-208ENST00000534626 EIF5P55010 431 aaKnown RBP22.35■■□□□ 1.17
RECQL4-208ENST00000534626 ZNF330Q9Y3S2 320 aaPredicted RBP22.35■■□□□ 1.17
RECQL4-208ENST00000534626 CEMIPQ8WUJ3 1361 aa22.35■■□□□ 1.17
RECQL4-208ENST00000534626 KDM2BQ8NHM5 1336 aa22.34■■□□□ 1.17
RECQL4-208ENST00000534626 C16orf71Q8IYS4 520 aaPredicted RBP22.34■■□□□ 1.17
RECQL4-208ENST00000534626 RTF1Q92541 710 aaKnown RBP22.34■■□□□ 1.17
RECQL4-208ENST00000534626 RSPH6AQ9H0K4 717 aa22.34■■□□□ 1.17
RECQL4-208ENST00000534626 BCL2L12Q9HB09 334 aa22.34■■□□□ 1.17
RECQL4-208ENST00000534626 RNF181Q9P0P0 153 aa22.34■■□□□ 1.17
RECQL4-208ENST00000534626 TNRC6CQ9HCJ0 1690 aaKnown RBP22.33■■□□□ 1.17
RECQL4-208ENST00000534626 BTBD11A6QL63 1104 aa22.33■■□□□ 1.17
RECQL4-208ENST00000534626 U2AF1L5P0DN76 240 aaPredicted RBP22.33■■□□□ 1.17
RECQL4-208ENST00000534626 U2AF1Q01081 240 aaKnown RBP eCLIP22.33■■□□□ 1.17
RECQL4-208ENST00000534626 H0YIN7 160 aa22.32■■□□□ 1.16
RECQL4-208ENST00000534626 IL6STP40189 918 aaPredicted RBP22.32■■□□□ 1.16
RECQL4-208ENST00000534626 BICDL1Q6ZP65 573 aa22.32■■□□□ 1.16
RECQL4-208ENST00000534626 PPP2R1AP30153 589 aa22.31■■□□□ 1.16
RECQL4-208ENST00000534626 C2CD5Q86YS7 1000 aa22.31■■□□□ 1.16
RECQL4-208ENST00000534626 TTLL6Q8N841 843 aa22.31■■□□□ 1.16
RECQL4-208ENST00000534626 PHACTR3Q96KR7 559 aa22.31■■□□□ 1.16
RECQL4-208ENST00000534626 NMRK2Q9NPI5 230 aa22.31■■□□□ 1.16
RECQL4-208ENST00000534626 PDZRN3Q9UPQ7 1066 aa22.31■■□□□ 1.16
RECQL4-208ENST00000534626 CCDC88AQ3V6T2 1871 aa22.3■■□□□ 1.16
RECQL4-208ENST00000534626 CARMIL3Q8ND23 1372 aa22.3■■□□□ 1.16
RECQL4-208ENST00000534626 BCORQ6W2J9 1755 aa22.3■■□□□ 1.16
RECQL4-208ENST00000534626 ZC3H4Q9UPT8 1303 aaKnown RBP22.3■■□□□ 1.16
RECQL4-208ENST00000534626 ANKRD31Q8N7Z5 1873 aa22.29■■□□□ 1.16
RECQL4-208ENST00000534626 NPHP1O15259 732 aa22.29■■□□□ 1.16
RECQL4-208ENST00000534626 NEFMP07197 916 aa22.29■■□□□ 1.16
RECQL4-208ENST00000534626 APLP1P51693 650 aa22.29■■□□□ 1.16
RECQL4-208ENST00000534626 PDE6BP35913 854 aa22.28■■□□□ 1.16
RECQL4-208ENST00000534626 TBC1D2BQ9UPU7 963 aa22.28■■□□□ 1.16
RECQL4-208ENST00000534626 TBC1D9BQ66K14 1250 aa22.27■■□□□ 1.16
RECQL4-208ENST00000534626 RBM46Q8TBY0 533 aaKnown RBP22.27■■□□□ 1.16
RECQL4-208ENST00000534626 TIAM2Q8IVF5 1701 aa22.26■■□□□ 1.15
RECQL4-208ENST00000534626 A1BGP04217 495 aa22.26■■□□□ 1.15
RECQL4-208ENST00000534626 LMNB1P20700 586 aa22.26■■□□□ 1.15
RECQL4-208ENST00000534626 SETDB2Q96T68 719 aa22.26■■□□□ 1.15
RECQL4-208ENST00000534626 HTATSF1O43719 755 aaKnown RBP22.25■■□□□ 1.15
RECQL4-208ENST00000534626 BRIP1Q9BX63 1249 aa22.25■■□□□ 1.15
RECQL4-208ENST00000534626 SNRPA1P09661 255 aaKnown RBP22.24■■□□□ 1.15
RECQL4-208ENST00000534626 ST5P78524 1137 aa22.24■■□□□ 1.15
RECQL4-208ENST00000534626 RASSF7Q02833 373 aa22.24■■□□□ 1.15
RECQL4-208ENST00000534626 DZIP3Q86Y13 1208 aaKnown RBP22.24■■□□□ 1.15
RECQL4-208ENST00000534626 CNBD1Q8NA66 436 aa22.24■■□□□ 1.15
RECQL4-208ENST00000534626 CACNA1SQ13698 1873 aa22.24■■□□□ 1.15
RECQL4-208ENST00000534626 CEP350Q5VT06 3117 aa22.24■■□□□ 1.15
RECQL4-208ENST00000534626 COL11A2P13942 1736 aaPredicted RBP22.23■■□□□ 1.15
RECQL4-208ENST00000534626 KCNQ3O43525 872 aa22.23■■□□□ 1.15
RECQL4-208ENST00000534626 PRR5LQ6MZQ0 368 aa22.23■■□□□ 1.15
RECQL4-208ENST00000534626 MCM10Q7L590 875 aa22.23■■□□□ 1.15
RECQL4-208ENST00000534626 ZNF622Q969S3 477 aaKnown RBP eCLIP22.23■■□□□ 1.154e-7■■□□□ 14
RECQL4-208ENST00000534626 ZNF652Q9Y2D9 606 aa22.23■■□□□ 1.15
RECQL4-208ENST00000534626 DLG5Q8TDM6 1919 aa22.23■■□□□ 1.15
RECQL4-208ENST00000534626 CAMTA2O94983 1202 aa22.22■■□□□ 1.15
RECQL4-208ENST00000534626 FSTL1Q12841 308 aa22.22■■□□□ 1.15
RECQL4-208ENST00000534626 WDR90Q96KV7 1748 aa22.22■■□□□ 1.15
RECQL4-208ENST00000534626 LAMB4A4D0S4 1761 aa22.22■■□□□ 1.15
RECQL4-208ENST00000534626 DICER1Q9UPY3 1922 aaKnown RBP22.21■■□□□ 1.15
RECQL4-208ENST00000534626 ARFGEF2Q9Y6D5 1785 aa22.21■■□□□ 1.15
RECQL4-208ENST00000534626 RRAGCQ9HB90 399 aa22.21■■□□□ 1.15
RECQL4-208ENST00000534626 FER1L6Q2WGJ9 1857 aa22.2■■□□□ 1.14
RECQL4-208ENST00000534626 USP16Q9Y5T5 823 aa22.2■■□□□ 1.14
RECQL4-208ENST00000534626 CLEC4GQ6UXB4 293 aa22.19■■□□□ 1.14
RECQL4-208ENST00000534626 TAF7Q15545 349 aaPredicted RBP22.18■■□□□ 1.14
RECQL4-208ENST00000534626 CNKSR1Q969H4 720 aa22.18■■□□□ 1.14
RECQL4-208ENST00000534626 RGL2O15211 777 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms