RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 KIF16BQ96L93 1317 aa12.89□□□□□ -0.35
RPS3-219ENST00000534440 PRAMEF22A3QJZ6 481 aa12.89□□□□□ -0.35
RPS3-219ENST00000534440 ERVV-2B6SEH9 535 aa12.89□□□□□ -0.35
RPS3-219ENST00000534440 EXOC5O00471 708 aa12.89□□□□□ -0.35
RPS3-219ENST00000534440 TRIM27P14373 513 aa12.89□□□□□ -0.35
RPS3-219ENST00000534440 DDB1Q16531 1140 aa12.89□□□□□ -0.35
RPS3-219ENST00000534440 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
RPS3-219ENST00000534440 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.89□□□□□ -0.35
RPS3-219ENST00000534440 PANK1Q8TE04 598 aa12.89□□□□□ -0.35
RPS3-219ENST00000534440 NOB1Q9ULX3 412 aaKnown RBP12.89□□□□□ -0.35
RPS3-219ENST00000534440 RREB1Q92766 1687 aa12.89□□□□□ -0.35
RPS3-219ENST00000534440 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
RPS3-219ENST00000534440 PDGFDQ9GZP0 370 aaPredicted RBP12.88□□□□□ -0.35
RPS3-219ENST00000534440 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
RPS3-219ENST00000534440 GIGYF1O75420 1035 aaPredicted RBP12.87□□□□□ -0.35
RPS3-219ENST00000534440 PDE3AQ14432 1141 aa12.87□□□□□ -0.35
RPS3-219ENST00000534440 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
RPS3-219ENST00000534440 NECTIN2Q92692 538 aa12.87□□□□□ -0.35
RPS3-219ENST00000534440 CLUAP1Q96AJ1 413 aa12.87□□□□□ -0.35
RPS3-219ENST00000534440 ZNF496Q96IT1 587 aaPredicted RBP12.87□□□□□ -0.35
RPS3-219ENST00000534440 NUP188Q5SRE5 1749 aa12.86□□□□□ -0.35
RPS3-219ENST00000534440 HOXB7P09629 217 aa12.86□□□□□ -0.35
RPS3-219ENST00000534440 YY1P25490 414 aa12.86□□□□□ -0.35
RPS3-219ENST00000534440 HDGFL1Q5TGJ6 251 aa12.86□□□□□ -0.35
RPS3-219ENST00000534440 ERICH6BQ5W0A0 696 aa12.86□□□□□ -0.35
RPS3-219ENST00000534440 ATF7IPQ6VMQ6 1270 aa12.86□□□□□ -0.35
RPS3-219ENST00000534440 G2E3Q7L622 706 aa12.86□□□□□ -0.35
RPS3-219ENST00000534440 PIGBQ92521 554 aa12.86□□□□□ -0.35
RPS3-219ENST00000534440 PTGER2P43116 358 aa12.85□□□□□ -0.35
RPS3-219ENST00000534440 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
RPS3-219ENST00000534440 COG6Q9Y2V7 657 aa12.85□□□□□ -0.35
RPS3-219ENST00000534440 ABCC4O15439 1325 aa12.85□□□□□ -0.35
RPS3-219ENST00000534440 CCDC30Q5VVM6 783 aa12.84□□□□□ -0.35
RPS3-219ENST00000534440 N4BP2Q86UW6 1770 aaPredicted RBP12.84□□□□□ -0.35
RPS3-219ENST00000534440 NHSQ6T4R5 1651 aa12.83□□□□□ -0.35
RPS3-219ENST00000534440 TJP1Q07157 1748 aa12.83□□□□□ -0.36
RPS3-219ENST00000534440 EIF2S2P20042 333 aaKnown RBP12.83□□□□□ -0.36
RPS3-219ENST00000534440 PROSER3Q2NL68 480 aa12.83□□□□□ -0.36
RPS3-219ENST00000534440 DZIP1LQ8IYY4 767 aaKnown RBP12.83□□□□□ -0.36
RPS3-219ENST00000534440 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
RPS3-219ENST00000534440 PPP4R2Q9NY27 417 aa12.83□□□□□ -0.36
RPS3-219ENST00000534440 CHPF2Q9P2E5 772 aa12.83□□□□□ -0.36
RPS3-219ENST00000534440 PPP1R1BQ9UD71 204 aaPredicted RBP12.83□□□□□ -0.36
RPS3-219ENST00000534440 ASAP1Q9ULH1 1129 aa12.83□□□□□ -0.36
RPS3-219ENST00000534440 CACNA1FO60840 1977 aa12.83□□□□□ -0.36
RPS3-219ENST00000534440 ANXA1P04083 346 aa12.82□□□□□ -0.36
RPS3-219ENST00000534440 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
RPS3-219ENST00000534440 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
RPS3-219ENST00000534440 B4GALNT3Q6L9W6 998 aa12.82□□□□□ -0.36
RPS3-219ENST00000534440 TMEM57Q8N5G2 664 aa12.82□□□□□ -0.36
RPS3-219ENST00000534440 ARHGAP45Q92619 1136 aa12.82□□□□□ -0.36
RPS3-219ENST00000534440 ACSBG1Q96GR2 724 aa12.82□□□□□ -0.36
RPS3-219ENST00000534440 FMNL2Q96PY5 1086 aa12.82□□□□□ -0.36
RPS3-219ENST00000534440 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
RPS3-219ENST00000534440 IPO8O15397 1037 aaKnown RBP12.81□□□□□ -0.36
RPS3-219ENST00000534440 MVPQ14764 893 aaKnown RBP12.81□□□□□ -0.36
RPS3-219ENST00000534440 FTSJ3Q8IY81 847 aaKnown RBP12.81□□□□□ -0.36
RPS3-219ENST00000534440 SGIP1Q9BQI5 828 aa12.81□□□□□ -0.36
RPS3-219ENST00000534440 STK31Q9BXU1 1019 aa12.81□□□□□ -0.36
RPS3-219ENST00000534440 PTPRCP08575 1304 aa12.81□□□□□ -0.36
RPS3-219ENST00000534440 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
RPS3-219ENST00000534440 GOLGB1Q14789 3259 aaKnown RBP12.8□□□□□ -0.36
RPS3-219ENST00000534440 PTCD1O75127 700 aaKnown RBP12.8□□□□□ -0.36
RPS3-219ENST00000534440 ZBTB7AO95365 584 aa12.8□□□□□ -0.36
RPS3-219ENST00000534440 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
RPS3-219ENST00000534440 FLIIQ13045 1269 aa12.8□□□□□ -0.36
RPS3-219ENST00000534440 PDIA6Q15084 440 aa12.8□□□□□ -0.36
RPS3-219ENST00000534440 SLC15A2Q16348 729 aa12.8□□□□□ -0.36
RPS3-219ENST00000534440 SYTL4Q96C24 671 aaPredicted RBP12.8□□□□□ -0.36
RPS3-219ENST00000534440 SLC4A9Q96Q91 983 aa12.8□□□□□ -0.36
RPS3-219ENST00000534440 API5Q9BZZ5 524 aaKnown RBP12.8□□□□□ -0.36
RPS3-219ENST00000534440 PHAXQ9H814 394 aaKnown RBP12.8□□□□□ -0.36
RPS3-219ENST00000534440 USP16Q9Y5T5 823 aa12.8□□□□□ -0.36
RPS3-219ENST00000534440 BTAF1O14981 1849 aa12.8□□□□□ -0.36
RPS3-219ENST00000534440 SBF2Q86WG5 1849 aa12.8□□□□□ -0.36
RPS3-219ENST00000534440 LRP10Q7Z4F1 713 aa12.79□□□□□ -0.36
RPS3-219ENST00000534440 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
RPS3-219ENST00000534440 F6X3S4 739 aa12.78□□□□□ -0.36
RPS3-219ENST00000534440 PIP4K2AP48426 406 aaPredicted RBP12.78□□□□□ -0.36
RPS3-219ENST00000534440 ITPRIPQ8IWB1 547 aa12.78□□□□□ -0.36
RPS3-219ENST00000534440 RGPD3A6NKT7 1758 aaPredicted RBP12.78□□□□□ -0.36
RPS3-219ENST00000534440 RGPD4Q7Z3J3 1758 aa12.78□□□□□ -0.36
RPS3-219ENST00000534440 ADCY9O60503 1353 aa12.78□□□□□ -0.36
RPS3-219ENST00000534440 CASZ1Q86V15 1759 aa12.77□□□□□ -0.36
RPS3-219ENST00000534440 MS4A1P11836 297 aa12.77□□□□□ -0.37
RPS3-219ENST00000534440 POTEDQ86YR6 584 aa12.77□□□□□ -0.37
RPS3-219ENST00000534440 DBF4Q9UBU7 674 aaPredicted RBP12.77□□□□□ -0.37
RPS3-219ENST00000534440 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.37
RPS3-219ENST00000534440 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.37
RPS3-219ENST00000534440 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
RPS3-219ENST00000534440 FKBP5Q13451 457 aaPredicted RBP12.76□□□□□ -0.37
RPS3-219ENST00000534440 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
RPS3-219ENST00000534440 DNAJC10Q8IXB1 793 aa12.76□□□□□ -0.37
RPS3-219ENST00000534440 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
RPS3-219ENST00000534440 SYT17Q9BSW7 474 aa12.76□□□□□ -0.37
RPS3-219ENST00000534440 MTFR1LQ9H019 292 aa12.76□□□□□ -0.37
RPS3-219ENST00000534440 DDX21Q9NR30 783 aaKnown RBP eCLIP12.76□□□□□ -0.375e-35■□□□□ 8.5
RPS3-219ENST00000534440 STK32BQ9NY57 414 aa12.76□□□□□ -0.37
RPS3-219ENST00000534440 PALLDQ8WX93 1383 aa12.76□□□□□ -0.37
RPS3-219ENST00000534440 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms