RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 FMNL2Q96PY5 1086 aa23.64■■□□□ 1.37
AP003555.3-201ENST00000534086 KIF13BQ9NQT8 1826 aa23.63■■□□□ 1.37
AP003555.3-201ENST00000534086 A0A0G2JLW4 131 aa23.63■■□□□ 1.37
AP003555.3-201ENST00000534086 NEFMP07197 916 aa23.63■■□□□ 1.37
AP003555.3-201ENST00000534086 C10orf71Q711Q0 1435 aa23.63■■□□□ 1.37
AP003555.3-201ENST00000534086 MCM10Q7L590 875 aa23.63■■□□□ 1.37
AP003555.3-201ENST00000534086 NARFQ9UHQ1 456 aa23.63■■□□□ 1.37
AP003555.3-201ENST00000534086 COL15A1P39059 1388 aa23.63■■□□□ 1.37
AP003555.3-201ENST00000534086 PXDNLA1KZ92 1463 aa23.62■■□□□ 1.37
AP003555.3-201ENST00000534086 TM4SF1P30408 202 aa23.62■■□□□ 1.37
AP003555.3-201ENST00000534086 KCNQ3O43525 872 aa23.61■■□□□ 1.37
AP003555.3-201ENST00000534086 HTATSF1O43719 755 aaKnown RBP23.61■■□□□ 1.37
AP003555.3-201ENST00000534086 DDR1Q08345 913 aa23.61■■□□□ 1.37
AP003555.3-201ENST00000534086 DDX10Q13206 875 aaKnown RBP23.61■■□□□ 1.37
AP003555.3-201ENST00000534086 DCTN1Q14203 1278 aa23.6■■□□□ 1.37
AP003555.3-201ENST00000534086 N4BP2Q86UW6 1770 aaPredicted RBP23.6■■□□□ 1.37
AP003555.3-201ENST00000534086 POLRMTO00411 1230 aaKnown RBP23.59■■□□□ 1.37
AP003555.3-201ENST00000534086 DPEP1P16444 411 aa23.59■■□□□ 1.37
AP003555.3-201ENST00000534086 EIF5P55010 431 aaKnown RBP23.59■■□□□ 1.37
AP003555.3-201ENST00000534086 RALBP1Q15311 655 aa23.59■■□□□ 1.37
AP003555.3-201ENST00000534086 A0A087WZG4 1122 aa23.58■■□□□ 1.37
AP003555.3-201ENST00000534086 BCS1LQ9Y276 419 aa23.58■■□□□ 1.37
AP003555.3-201ENST00000534086 KIAA1551Q9HCM1 1747 aa23.57■■□□□ 1.36
AP003555.3-201ENST00000534086 NFIXQ14938 502 aa23.56■■□□□ 1.36
AP003555.3-201ENST00000534086 PNNQ9H307 717 aaKnown RBP23.56■■□□□ 1.36
AP003555.3-201ENST00000534086 BCL2L12Q9HB09 334 aa23.56■■□□□ 1.36
AP003555.3-201ENST00000534086 ZNF330Q9Y3S2 320 aaPredicted RBP23.56■■□□□ 1.36
AP003555.3-201ENST00000534086 A1BGP04217 495 aa23.55■■□□□ 1.36
AP003555.3-201ENST00000534086 TAF7Q15545 349 aaPredicted RBP23.55■■□□□ 1.36
AP003555.3-201ENST00000534086 NPM2Q86SE8 214 aaKnown RBP23.55■■□□□ 1.36
AP003555.3-201ENST00000534086 PLEKHF1Q96S99 279 aa23.55■■□□□ 1.36
AP003555.3-201ENST00000534086 KCNA3P22001 575 aa23.54■■□□□ 1.36
AP003555.3-201ENST00000534086 IL6STP40189 918 aaPredicted RBP23.54■■□□□ 1.36
AP003555.3-201ENST00000534086 USP16Q9Y5T5 823 aa23.53■■□□□ 1.36
AP003555.3-201ENST00000534086 SERPINB2P05120 415 aa23.52■■□□□ 1.36
AP003555.3-201ENST00000534086 SNRPA1P09661 255 aaKnown RBP23.52■■□□□ 1.36
AP003555.3-201ENST00000534086 PIM2Q9P1W9 311 aa23.52■■□□□ 1.36
AP003555.3-201ENST00000534086 TBC1D2BQ9UPU7 963 aa23.52■■□□□ 1.36
AP003555.3-201ENST00000534086 NFE2L2Q16236 605 aa23.51■■□□□ 1.35
AP003555.3-201ENST00000534086 BICDL1Q6ZP65 573 aa23.51■■□□□ 1.35
AP003555.3-201ENST00000534086 MAPK8IP3Q9UPT6 1336 aa23.51■■□□□ 1.35
AP003555.3-201ENST00000534086 PRAMEF22A3QJZ6 481 aa23.5■■□□□ 1.35
AP003555.3-201ENST00000534086 ARHGAP27Q6ZUM4 889 aa23.5■■□□□ 1.35
AP003555.3-201ENST00000534086 MIS18AQ9NYP9 233 aa23.5■■□□□ 1.35
AP003555.3-201ENST00000534086 ATP10DQ9P241 1426 aa23.5■■□□□ 1.35
AP003555.3-201ENST00000534086 DLG5Q8TDM6 1919 aa23.49■■□□□ 1.35
AP003555.3-201ENST00000534086 CHRNA5P30532 468 aa23.49■■□□□ 1.35
AP003555.3-201ENST00000534086 AFDNP55196 1824 aaKnown RBP23.48■■□□□ 1.35
AP003555.3-201ENST00000534086 BRCA1P38398 1863 aaKnown RBP23.48■■□□□ 1.35
AP003555.3-201ENST00000534086 GIGYF1O75420 1035 aaPredicted RBP23.48■■□□□ 1.35
AP003555.3-201ENST00000534086 DALRD3Q5D0E6 543 aaKnown RBP23.48■■□□□ 1.35
AP003555.3-201ENST00000534086 TBC1D9BQ66K14 1250 aa23.48■■□□□ 1.35
AP003555.3-201ENST00000534086 MYBBP1AQ9BQG0 1328 aaKnown RBP23.48■■□□□ 1.35
AP003555.3-201ENST00000534086 PIP4K2AP48426 406 aaPredicted RBP23.47■■□□□ 1.35
AP003555.3-201ENST00000534086 PNISRQ8TF01 805 aaKnown RBP23.47■■□□□ 1.35
AP003555.3-201ENST00000534086 ADCY9O60503 1353 aa23.46■■□□□ 1.35
AP003555.3-201ENST00000534086 C1QTNF8P60827 252 aa23.46■■□□□ 1.35
AP003555.3-201ENST00000534086 DZIP3Q86Y13 1208 aaKnown RBP23.46■■□□□ 1.35
AP003555.3-201ENST00000534086 NRXN2Q9P2S2 1712 aa23.45■■□□□ 1.34
AP003555.3-201ENST00000534086 CAMTA2O94983 1202 aa23.45■■□□□ 1.34
AP003555.3-201ENST00000534086 THUMPD2Q9BTF0 503 aaKnown RBP23.45■■□□□ 1.34
AP003555.3-201ENST00000534086 ZNF526Q8TF50 670 aaPredicted RBP23.44■■□□□ 1.34
AP003555.3-201ENST00000534086 GPBP1L1Q9HC44 474 aaPredicted RBP23.44■■□□□ 1.34
AP003555.3-201ENST00000534086 SCN7AQ01118 1682 aa23.43■■□□□ 1.34
AP003555.3-201ENST00000534086 ARFGEF1Q9Y6D6 1849 aa23.43■■□□□ 1.34
AP003555.3-201ENST00000534086 RIPK4P57078 832 aa23.42■■□□□ 1.34
AP003555.3-201ENST00000534086 SETDB2Q96T68 719 aa23.42■■□□□ 1.34
AP003555.3-201ENST00000534086 CARMIL3Q8ND23 1372 aa23.41■■□□□ 1.34
AP003555.3-201ENST00000534086 NBPF26B4DH59 902 aa23.41■■□□□ 1.34
AP003555.3-201ENST00000534086 NBPF10Q6P3W6 841 aaKnown RBP23.41■■□□□ 1.34
AP003555.3-201ENST00000534086 NBPF15Q8N660 670 aa23.41■■□□□ 1.34
AP003555.3-201ENST00000534086 H0YIN7 160 aa23.4■■□□□ 1.34
AP003555.3-201ENST00000534086 EIF4A1P60842 406 aaKnown RBP23.4■■□□□ 1.34
AP003555.3-201ENST00000534086 C2CD5Q86YS7 1000 aa23.4■■□□□ 1.34
AP003555.3-201ENST00000534086 CLEC4GQ6UXB4 293 aa23.39■■□□□ 1.33
AP003555.3-201ENST00000534086 KDM3BQ7LBC6 1761 aa23.38■■□□□ 1.33
AP003555.3-201ENST00000534086 NPHP1O15259 732 aa23.38■■□□□ 1.33
AP003555.3-201ENST00000534086 TMPOP42166 694 aaKnown RBP23.38■■□□□ 1.33
AP003555.3-201ENST00000534086 WDR43Q15061 677 aaKnown RBP eCLIP23.38■■□□□ 1.33
AP003555.3-201ENST00000534086 PRR5LQ6MZQ0 368 aa23.38■■□□□ 1.33
AP003555.3-201ENST00000534086 BRIP1Q9BX63 1249 aa23.38■■□□□ 1.33
AP003555.3-201ENST00000534086 ZNF652Q9Y2D9 606 aa23.38■■□□□ 1.33
AP003555.3-201ENST00000534086 PDE6BP35913 854 aa23.37■■□□□ 1.33
AP003555.3-201ENST00000534086 CCDC24Q8N4L8 307 aa23.37■■□□□ 1.33
AP003555.3-201ENST00000534086 TTLL6Q8N841 843 aa23.37■■□□□ 1.33
AP003555.3-201ENST00000534086 LMOD3Q0VAK6 560 aa23.36■■□□□ 1.33
AP003555.3-201ENST00000534086 C9orf131Q5VYM1 1079 aa23.36■■□□□ 1.33
AP003555.3-201ENST00000534086 CCDC146Q8IYE0 955 aa23.36■■□□□ 1.33
AP003555.3-201ENST00000534086 CNBD1Q8NA66 436 aa23.36■■□□□ 1.33
AP003555.3-201ENST00000534086 PRKRIP1Q9H875 184 aaPredicted RBP23.36■■□□□ 1.33
AP003555.3-201ENST00000534086 PDZRN3Q9UPQ7 1066 aa23.36■■□□□ 1.33
AP003555.3-201ENST00000534086 BCORQ6W2J9 1755 aa23.36■■□□□ 1.33
AP003555.3-201ENST00000534086 TSPYL4Q9UJ04 414 aa23.35■■□□□ 1.33
AP003555.3-201ENST00000534086 ST5P78524 1137 aa23.34■■□□□ 1.33
AP003555.3-201ENST00000534086 ZNF622Q969S3 477 aaKnown RBP eCLIP23.34■■□□□ 1.33
AP003555.3-201ENST00000534086 RRP7AQ9Y3A4 280 aaKnown RBP23.34■■□□□ 1.33
AP003555.3-201ENST00000534086 LAMB4A4D0S4 1761 aa23.34■■□□□ 1.33
AP003555.3-201ENST00000534086 DLEC1Q9Y238 1755 aa23.33■■□□□ 1.33
AP003555.3-201ENST00000534086 SENP3-EIF4A1A0A087X0R7 540 aa23.33■■□□□ 1.33
AP003555.3-201ENST00000534086 RGL2O15211 777 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms