RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 C1QTNF8P60827 252 aa23.34■■□□□ 1.33
VPS51-213ENST00000533827 ZNF790Q6PG37 636 aa23.34■■□□□ 1.33
VPS51-213ENST00000533827 COL15A1P39059 1388 aa23.34■■□□□ 1.33
VPS51-213ENST00000533827 BRCA1P38398 1863 aaKnown RBP23.33■■□□□ 1.33
VPS51-213ENST00000533827 ZNF496Q96IT1 587 aaPredicted RBP23.33■■□□□ 1.33
VPS51-213ENST00000533827 NARFQ9UHQ1 456 aa23.33■■□□□ 1.33
VPS51-213ENST00000533827 HEG1Q9ULI3 1381 aa23.32■■□□□ 1.32
VPS51-213ENST00000533827 POLRMTO00411 1230 aaKnown RBP23.32■■□□□ 1.32
VPS51-213ENST00000533827 GIGYF1O75420 1035 aaPredicted RBP23.32■■□□□ 1.32
VPS51-213ENST00000533827 U2AF1L5P0DN76 240 aaPredicted RBP23.32■■□□□ 1.32
VPS51-213ENST00000533827 U2AF1Q01081 240 aaKnown RBP eCLIP23.32■■□□□ 1.32
VPS51-213ENST00000533827 FCHSD2O94868 740 aa23.31■■□□□ 1.32
VPS51-213ENST00000533827 KCNA3P22001 575 aa23.31■■□□□ 1.32
VPS51-213ENST00000533827 BCS1LQ9Y276 419 aa23.31■■□□□ 1.32
VPS51-213ENST00000533827 STARD3NLO95772 234 aa23.3■■□□□ 1.32
VPS51-213ENST00000533827 CANXP27824 592 aaKnown RBP23.29■■□□□ 1.32
VPS51-213ENST00000533827 TEX13AQ9BXU3 409 aaPredicted RBP23.29■■□□□ 1.32
VPS51-213ENST00000533827 BCL2L12Q9HB09 334 aa23.29■■□□□ 1.32
VPS51-213ENST00000533827 EIF5P55010 431 aaKnown RBP23.28■■□□□ 1.32
VPS51-213ENST00000533827 BTBD11A6QL63 1104 aa23.27■■□□□ 1.32
VPS51-213ENST00000533827 NFIXQ14938 502 aa23.27■■□□□ 1.32
VPS51-213ENST00000533827 FMNL2Q96PY5 1086 aa23.27■■□□□ 1.32
VPS51-213ENST00000533827 NRXN2Q9P2S2 1712 aa23.27■■□□□ 1.32
VPS51-213ENST00000533827 KCNQ3O43525 872 aa23.26■■□□□ 1.31
VPS51-213ENST00000533827 PIM2Q9P1W9 311 aa23.26■■□□□ 1.31
VPS51-213ENST00000533827 AFDNP55196 1824 aaKnown RBP23.26■■□□□ 1.31
VPS51-213ENST00000533827 ARFGEF1Q9Y6D6 1849 aa23.25■■□□□ 1.31
VPS51-213ENST00000533827 A0A087WZG4 1122 aa23.24■■□□□ 1.31
VPS51-213ENST00000533827 RTF1Q92541 710 aaKnown RBP23.24■■□□□ 1.31
VPS51-213ENST00000533827 GPBP1L1Q9HC44 474 aaPredicted RBP23.24■■□□□ 1.31
VPS51-213ENST00000533827 HTATSF1O43719 755 aaKnown RBP23.23■■□□□ 1.31
VPS51-213ENST00000533827 ARHGAP27Q6ZUM4 889 aa23.23■■□□□ 1.31
VPS51-213ENST00000533827 MCM10Q7L590 875 aa23.23■■□□□ 1.31
VPS51-213ENST00000533827 SERPINB2P05120 415 aa23.22■■□□□ 1.31
VPS51-213ENST00000533827 CHRNA5P30532 468 aa23.22■■□□□ 1.31
VPS51-213ENST00000533827 IL6STP40189 918 aaPredicted RBP23.22■■□□□ 1.31
VPS51-213ENST00000533827 SENP3-EIF4A1A0A087X0R7 540 aa23.21■■□□□ 1.31
VPS51-213ENST00000533827 A1BGP04217 495 aa23.21■■□□□ 1.31
VPS51-213ENST00000533827 DCTN1Q14203 1278 aa23.21■■□□□ 1.31
VPS51-213ENST00000533827 DALRD3Q5D0E6 543 aaKnown RBP23.21■■□□□ 1.31
VPS51-213ENST00000533827 ZNF526Q8TF50 670 aaPredicted RBP23.21■■□□□ 1.31
VPS51-213ENST00000533827 SCN7AQ01118 1682 aa23.21■■□□□ 1.31
VPS51-213ENST00000533827 TBC1D2BQ9UPU7 963 aa23.19■■□□□ 1.3
VPS51-213ENST00000533827 USP16Q9Y5T5 823 aa23.19■■□□□ 1.3
VPS51-213ENST00000533827 PRAMEF22A3QJZ6 481 aa23.17■■□□□ 1.3
VPS51-213ENST00000533827 TBC1D9BQ66K14 1250 aa23.17■■□□□ 1.3
VPS51-213ENST00000533827 PLEKHF1Q96S99 279 aa23.17■■□□□ 1.3
VPS51-213ENST00000533827 ZNF330Q9Y3S2 320 aaPredicted RBP23.17■■□□□ 1.3
VPS51-213ENST00000533827 DLEC1Q9Y238 1755 aa23.17■■□□□ 1.3
VPS51-213ENST00000533827 DLG5Q8TDM6 1919 aa23.16■■□□□ 1.3
VPS51-213ENST00000533827 BICDL1Q6ZP65 573 aa23.16■■□□□ 1.3
VPS51-213ENST00000533827 CARMIL3Q8ND23 1372 aa23.15■■□□□ 1.3
VPS51-213ENST00000533827 SNRPA1P09661 255 aaKnown RBP23.15■■□□□ 1.3
VPS51-213ENST00000533827 CAMTA2O94983 1202 aa23.14■■□□□ 1.29
VPS51-213ENST00000533827 TAF7Q15545 349 aaPredicted RBP23.14■■□□□ 1.29
VPS51-213ENST00000533827 BCORQ6W2J9 1755 aa23.14■■□□□ 1.29
VPS51-213ENST00000533827 NEFMP07197 916 aa23.13■■□□□ 1.29
VPS51-213ENST00000533827 NPM2Q86SE8 214 aaKnown RBP23.13■■□□□ 1.29
VPS51-213ENST00000533827 KIF3CO14782 793 aa23.12■■□□□ 1.29
VPS51-213ENST00000533827 PIP4K2AP48426 406 aaPredicted RBP23.12■■□□□ 1.29
VPS51-213ENST00000533827 C9orf131Q5VYM1 1079 aa23.12■■□□□ 1.29
VPS51-213ENST00000533827 DZIP3Q86Y13 1208 aaKnown RBP23.12■■□□□ 1.29
VPS51-213ENST00000533827 ANKRD31Q8N7Z5 1873 aa23.11■■□□□ 1.29
VPS51-213ENST00000533827 C2CD5Q86YS7 1000 aa23.11■■□□□ 1.29
VPS51-213ENST00000533827 KDM3BQ7LBC6 1761 aa23.1■■□□□ 1.29
VPS51-213ENST00000533827 RALBP1Q15311 655 aa23.1■■□□□ 1.29
VPS51-213ENST00000533827 NFE2L2Q16236 605 aa23.1■■□□□ 1.29
VPS51-213ENST00000533827 PRR5LQ6MZQ0 368 aa23.1■■□□□ 1.29
VPS51-213ENST00000533827 MIS18AQ9NYP9 233 aa23.1■■□□□ 1.29
VPS51-213ENST00000533827 H0YIN7 160 aa23.09■■□□□ 1.29
VPS51-213ENST00000533827 TTLL6Q8N841 843 aa23.09■■□□□ 1.29
VPS51-213ENST00000533827 PNNQ9H307 717 aaKnown RBP23.09■■□□□ 1.29
VPS51-213ENST00000533827 SBF1O95248 1867 aa23.09■■□□□ 1.29
VPS51-213ENST00000533827 NBPF26B4DH59 902 aa23.08■■□□□ 1.29
VPS51-213ENST00000533827 NBPF10Q6P3W6 841 aaKnown RBP23.08■■□□□ 1.29
VPS51-213ENST00000533827 NBPF15Q8N660 670 aa23.08■■□□□ 1.29
VPS51-213ENST00000533827 PNISRQ8TF01 805 aaKnown RBP23.08■■□□□ 1.29
VPS51-213ENST00000533827 SETDB2Q96T68 719 aa23.08■■□□□ 1.29
VPS51-213ENST00000533827 BRIP1Q9BX63 1249 aa23.08■■□□□ 1.29
VPS51-213ENST00000533827 LAMB4A4D0S4 1761 aa23.07■■□□□ 1.28
VPS51-213ENST00000533827 CLEC4GQ6UXB4 293 aa23.07■■□□□ 1.28
VPS51-213ENST00000533827 PDZRN3Q9UPQ7 1066 aa23.07■■□□□ 1.28
VPS51-213ENST00000533827 PDE6BP35913 854 aa23.06■■□□□ 1.28
VPS51-213ENST00000533827 DDX10Q13206 875 aaKnown RBP23.06■■□□□ 1.28
VPS51-213ENST00000533827 CCDC24Q8N4L8 307 aa23.06■■□□□ 1.28
VPS51-213ENST00000533827 RNF181Q9P0P0 153 aa23.06■■□□□ 1.28
VPS51-213ENST00000533827 MAPK8IP3Q9UPT6 1336 aa23.06■■□□□ 1.28
VPS51-213ENST00000533827 COL11A2P13942 1736 aaPredicted RBP23.05■■□□□ 1.28
VPS51-213ENST00000533827 THUMPD2Q9BTF0 503 aaKnown RBP23.05■■□□□ 1.28
VPS51-213ENST00000533827 CNBD1Q8NA66 436 aa23.04■■□□□ 1.28
VPS51-213ENST00000533827 NMRK2Q9NPI5 230 aa23.04■■□□□ 1.28
VPS51-213ENST00000533827 CEP350Q5VT06 3117 aa23.03■■□□□ 1.28
VPS51-213ENST00000533827 RGL2O15211 777 aa23.03■■□□□ 1.28
VPS51-213ENST00000533827 EIF4A1P60842 406 aaKnown RBP23.03■■□□□ 1.28
VPS51-213ENST00000533827 RASSF7Q02833 373 aa23.03■■□□□ 1.28
VPS51-213ENST00000533827 HSPA6P17066 643 aa23.02■■□□□ 1.28
VPS51-213ENST00000533827 ZNF622Q969S3 477 aaKnown RBP eCLIP23.02■■□□□ 1.28
VPS51-213ENST00000533827 ZNF652Q9Y2D9 606 aa23.02■■□□□ 1.28
VPS51-213ENST00000533827 PRELPP51888 382 aa23.01■■□□□ 1.27
VPS51-213ENST00000533827 ST5P78524 1137 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms