RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 CFAP69A5D8W1 941 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 HMGN5P82970 282 aaKnown RBP8.29□□□□□ -1.08
BDNF-217ENST00000533131 RPUSD2Q8IZ73 545 aaKnown RBP8.29□□□□□ -1.08
BDNF-217ENST00000533131 CCDC89Q8N998 374 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 MAFBQ9Y5Q3 323 aaPredicted RBP8.29□□□□□ -1.08
BDNF-217ENST00000533131 K7ELQ4 463 aaPredicted RBP8.29□□□□□ -1.08
BDNF-217ENST00000533131 STAC3Q96MF2 364 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 UCN2Q96RP3 112 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 LIMD1Q9UGP4 676 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 ROCK2O75116 1388 aaKnown RBP8.28□□□□□ -1.08
BDNF-217ENST00000533131 FCHSD2O94868 740 aa8.28□□□□□ -1.08
BDNF-217ENST00000533131 HSP90AA2PQ14568 343 aaPredicted RBP8.28□□□□□ -1.08
BDNF-217ENST00000533131 TMEM259Q4ZIN3 620 aa8.28□□□□□ -1.08
BDNF-217ENST00000533131 PHLDB3Q6NSJ2 640 aa8.28□□□□□ -1.08
BDNF-217ENST00000533131 EFCAB3Q8N7B9 438 aa8.28□□□□□ -1.08
BDNF-217ENST00000533131 ATRIPQ8WXE1 791 aa8.28□□□□□ -1.08
BDNF-217ENST00000533131 CUEDC1Q9NWM3 386 aaPredicted RBP8.28□□□□□ -1.08
BDNF-217ENST00000533131 NUB1Q9Y5A7 615 aa8.28□□□□□ -1.08
BDNF-217ENST00000533131 CASKIN1Q8WXD9 1431 aa8.28□□□□□ -1.08
BDNF-217ENST00000533131 ATP2B4P23634 1241 aa8.28□□□□□ -1.08
BDNF-217ENST00000533131 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.28□□□□□ -1.08
BDNF-217ENST00000533131 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.28□□□□□ -1.08
BDNF-217ENST00000533131 PANK3Q9H999 370 aa8.28□□□□□ -1.08
BDNF-217ENST00000533131 MPHOSPH10O00566 681 aaKnown RBP8.27□□□□□ -1.09
BDNF-217ENST00000533131 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
BDNF-217ENST00000533131 RNF34Q969K3 372 aa8.27□□□□□ -1.09
BDNF-217ENST00000533131 LRRC41Q15345 812 aa8.27□□□□□ -1.09
BDNF-217ENST00000533131 TRIM44Q96DX7 344 aaPredicted RBP8.27□□□□□ -1.09
BDNF-217ENST00000533131 HFM1A2PYH4 1435 aa8.27□□□□□ -1.09
BDNF-217ENST00000533131 NEXNQ0ZGT2 675 aa8.27□□□□□ -1.09
BDNF-217ENST00000533131 ZNF594Q96JF6 807 aaPredicted RBP8.27□□□□□ -1.09
BDNF-217ENST00000533131 TINF2Q9BSI4 451 aa8.27□□□□□ -1.09
BDNF-217ENST00000533131 MRGBPQ9NV56 204 aa8.27□□□□□ -1.09
BDNF-217ENST00000533131 LZTS1Q9Y250 596 aa8.27□□□□□ -1.09
BDNF-217ENST00000533131 PCF11O94913 1555 aaKnown RBP8.27□□□□□ -1.09
BDNF-217ENST00000533131 CTTNBP2Q8WZ74 1663 aa8.26□□□□□ -1.09
BDNF-217ENST00000533131 TRAPPC10P48553 1259 aa8.26□□□□□ -1.09
BDNF-217ENST00000533131 GRM1Q13255 1194 aa8.26□□□□□ -1.09
BDNF-217ENST00000533131 NFE2L2Q16236 605 aa8.26□□□□□ -1.09
BDNF-217ENST00000533131 NLRP13Q86W25 1043 aa8.26□□□□□ -1.09
BDNF-217ENST00000533131 DAAM1Q9Y4D1 1078 aa8.26□□□□□ -1.09
BDNF-217ENST00000533131 DISP1Q96F81 1524 aa8.26□□□□□ -1.09
BDNF-217ENST00000533131 KTN1Q86UP2 1357 aaKnown RBP8.26□□□□□ -1.09
BDNF-217ENST00000533131 GOLGA6L22H0YM25 854 aa8.26□□□□□ -1.09
BDNF-217ENST00000533131 PPFIA3O75145 1194 aa8.26□□□□□ -1.09
BDNF-217ENST00000533131 PDGFRBP09619 1106 aa8.26□□□□□ -1.09
BDNF-217ENST00000533131 BANK1Q8NDB2 785 aa8.26□□□□□ -1.09
BDNF-217ENST00000533131 NGDNQ8NEJ9 315 aaKnown RBP8.26□□□□□ -1.09
BDNF-217ENST00000533131 RAD51AP2Q09MP3 1159 aa8.26□□□□□ -1.09
BDNF-217ENST00000533131 CT47A1Q5JQC4 288 aaPredicted RBP8.26□□□□□ -1.09
BDNF-217ENST00000533131 NOL7Q9UMY1 257 aaKnown RBP8.26□□□□□ -1.09
BDNF-217ENST00000533131 USP17L8P0C7I0 530 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 HSD3B2P26439 372 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 ATICP31939 592 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 UBE4AQ14139 1066 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 C21orf62-AS1Q17RA5 79 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 DDX46Q7L014 1031 aaKnown RBP8.25□□□□□ -1.09
BDNF-217ENST00000533131 OTUD6BQ8N6M0 293 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 FLCNQ8NFG4 579 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 ZMIZ1Q9ULJ6 1067 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 ZBBXA8MT70 800 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 HCLS1P14317 486 aaPredicted RBP8.25□□□□□ -1.09
BDNF-217ENST00000533131 ZNF76P36508 570 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 UPF1Q92900 1129 aaKnown RBP eCLIP8.25□□□□□ -1.09
BDNF-217ENST00000533131 JADE2Q9NQC1 790 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 FANCLQ9NW38 375 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 MRVI1Q9Y6F6 885 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 MYRIPQ8NFW9 859 aa8.25□□□□□ -1.09
BDNF-217ENST00000533131 CCDC47Q96A33 483 aaKnown RBP8.25□□□□□ -1.09
BDNF-217ENST00000533131 TSPYL2Q9H2G4 693 aaPredicted RBP8.25□□□□□ -1.09
BDNF-217ENST00000533131 FARP1Q9Y4F1 1045 aaPredicted RBP8.25□□□□□ -1.09
BDNF-217ENST00000533131 MYBBP1AQ9BQG0 1328 aaKnown RBP8.24□□□□□ -1.09
BDNF-217ENST00000533131 PRMT3O60678 531 aa8.24□□□□□ -1.09
BDNF-217ENST00000533131 LONRF1Q17RB8 773 aa8.24□□□□□ -1.09
BDNF-217ENST00000533131 NBPF20Q3BBV1 942 aa8.24□□□□□ -1.09
BDNF-217ENST00000533131 CYB5RLQ6IPT4 315 aa8.24□□□□□ -1.09
BDNF-217ENST00000533131 PPM1EQ8WY54 764 aa8.24□□□□□ -1.09
BDNF-217ENST00000533131 CEP63Q96MT8 703 aa8.24□□□□□ -1.09
BDNF-217ENST00000533131 RNF19AQ9NV58 838 aa8.24□□□□□ -1.09
BDNF-217ENST00000533131 RRP7AQ9Y3A4 280 aaKnown RBP8.24□□□□□ -1.09
BDNF-217ENST00000533131 PPRC1Q5VV67 1664 aaKnown RBP8.24□□□□□ -1.09
BDNF-217ENST00000533131 RRP9O43818 475 aaKnown RBP8.24□□□□□ -1.09
BDNF-217ENST00000533131 PRR7Q8TB68 274 aa8.24□□□□□ -1.09
BDNF-217ENST00000533131 ZNF512BQ96KM6 892 aaPredicted RBP8.24□□□□□ -1.09
BDNF-217ENST00000533131 HOMER2Q9NSB8 354 aa8.24□□□□□ -1.09
BDNF-217ENST00000533131 MAP3K7O43318 606 aa8.24□□□□□ -1.09
BDNF-217ENST00000533131 NLRP6P59044 892 aa8.24□□□□□ -1.09
BDNF-217ENST00000533131 TMF1P82094 1093 aa8.24□□□□□ -1.09
BDNF-217ENST00000533131 UPF2Q9HAU5 1272 aaKnown RBP8.24□□□□□ -1.09
BDNF-217ENST00000533131 IFIT2P09913 472 aaKnown RBP8.23□□□□□ -1.09
BDNF-217ENST00000533131 ADD2P35612 726 aa8.23□□□□□ -1.09
BDNF-217ENST00000533131 SENP7Q9BQF6 1050 aa8.23□□□□□ -1.09
BDNF-217ENST00000533131 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.23□□□□□ -1.09
BDNF-217ENST00000533131 QPCTQ16769 361 aa8.23□□□□□ -1.09
BDNF-217ENST00000533131 ZNF394Q53GI3 561 aa8.23□□□□□ -1.09
BDNF-217ENST00000533131 PPP1R15BQ5SWA1 713 aa8.23□□□□□ -1.09
BDNF-217ENST00000533131 SCINQ9Y6U3 715 aa8.23□□□□□ -1.09
BDNF-217ENST00000533131 TIMM44O43615 452 aa8.23□□□□□ -1.09
BDNF-217ENST00000533131 HMMRO75330 724 aa8.23□□□□□ -1.09
BDNF-217ENST00000533131 RSPH1Q8WYR4 309 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms