RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 RTCBQ9Y3I0 505 aaKnown RBP14.54□□□□□ -0.08
TRAPPC4-211ENST00000533012 FANCIQ9NVI1 1328 aa14.54□□□□□ -0.08
TRAPPC4-211ENST00000533012 PAPPAQ13219 1627 aa14.54□□□□□ -0.08
TRAPPC4-211ENST00000533012 A1BGP04217 495 aa14.53□□□□□ -0.08
TRAPPC4-211ENST00000533012 HOXB7P09629 217 aa14.53□□□□□ -0.08
TRAPPC4-211ENST00000533012 R3HDM1Q15032 1099 aaKnown RBP14.53□□□□□ -0.08
TRAPPC4-211ENST00000533012 FLAD1Q8NFF5 587 aa14.53□□□□□ -0.08
TRAPPC4-211ENST00000533012 SOS1Q07889 1333 aaPredicted RBP14.52□□□□□ -0.08
TRAPPC4-211ENST00000533012 ZBED9Q6R2W3 1325 aa14.52□□□□□ -0.08
TRAPPC4-211ENST00000533012 CANXP27824 592 aaKnown RBP14.52□□□□□ -0.09
TRAPPC4-211ENST00000533012 EXOSC9Q06265 439 aaKnown RBP14.52□□□□□ -0.09
TRAPPC4-211ENST00000533012 TRAPPC3LQ5T215 181 aa14.52□□□□□ -0.09
TRAPPC4-211ENST00000533012 NPM2Q86SE8 214 aaKnown RBP14.52□□□□□ -0.09
TRAPPC4-211ENST00000533012 SSFA2P28290 1259 aa14.51□□□□□ -0.09
TRAPPC4-211ENST00000533012 TWISTNBQ3B726 338 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC4-211ENST00000533012 ZBTB1Q9Y2K1 713 aa14.51□□□□□ -0.09
TRAPPC4-211ENST00000533012 ZNF831Q5JPB2 1677 aa14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 RREB1Q92766 1687 aa14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 PSDA5PKW4 1024 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 MSH5O43196 834 aa14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 PHF14O94880 888 aa14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 ADRA2BP18089 450 aa14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 IL6STP40189 918 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 HDGFL1Q5TGJ6 251 aa14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 TRMT2AQ8IZ69 625 aaKnown RBP14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 TSPYL6Q8N831 410 aa14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 NECTIN2Q92692 538 aa14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 KDM3BQ7LBC6 1761 aa14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 UBR2Q8IWV8 1755 aa14.5□□□□□ -0.09
TRAPPC4-211ENST00000533012 RFC4P35249 363 aa14.49□□□□□ -0.09
TRAPPC4-211ENST00000533012 COL23A1Q86Y22 540 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC4-211ENST00000533012 YTHDC1Q96MU7 727 aaKnown RBP14.49□□□□□ -0.09
TRAPPC4-211ENST00000533012 ERBB4Q15303 1308 aa14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 PNPLA7Q6ZV29 1317 aa14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 A0A087WZG4 1122 aa14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 NBPF26B4DH59 902 aa14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 VAMP4O75379 141 aa14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 EIF5P55010 431 aaKnown RBP14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 CCDC30Q5VVM6 783 aa14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 NBPF10Q6P3W6 841 aaKnown RBP14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 SMIM5Q71RC9 77 aa14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 NBPF15Q8N660 670 aa14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 ARHGEF1Q92888 912 aaKnown RBP14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 ARXQ96QS3 562 aa14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 DBF4Q9UBU7 674 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 ZNF330Q9Y3S2 320 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC4-211ENST00000533012 C4BP0C0L5 1744 aa14.47□□□□□ -0.09
TRAPPC4-211ENST00000533012 NUP188Q5SRE5 1749 aa14.47□□□□□ -0.09
TRAPPC4-211ENST00000533012 CENPBP07199 599 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC4-211ENST00000533012 MYL6BP14649 208 aa14.47□□□□□ -0.09
TRAPPC4-211ENST00000533012 PIP4K2AP48426 406 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC4-211ENST00000533012 AMIGO3Q86WK7 504 aa14.47□□□□□ -0.09
TRAPPC4-211ENST00000533012 C5P01031 1676 aa14.46□□□□□ -0.09
TRAPPC4-211ENST00000533012 SLC16A10Q8TF71 515 aa14.46□□□□□ -0.09
TRAPPC4-211ENST00000533012 DDX21Q9NR30 783 aaKnown RBP eCLIP14.46□□□□□ -0.09
TRAPPC4-211ENST00000533012 TJP1Q07157 1748 aa14.46□□□□□ -0.1
TRAPPC4-211ENST00000533012 ZPR1O75312 459 aa14.45□□□□□ -0.1
TRAPPC4-211ENST00000533012 PDIA6Q15084 440 aa14.45□□□□□ -0.1
TRAPPC4-211ENST00000533012 STK31Q9BXU1 1019 aa14.45□□□□□ -0.1
TRAPPC4-211ENST00000533012 HYPKQ9NX55 129 aa14.45□□□□□ -0.1
TRAPPC4-211ENST00000533012 CHPF2Q9P2E5 772 aa14.45□□□□□ -0.1
TRAPPC4-211ENST00000533012 CICQ96RK0 1608 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-211ENST00000533012 CT47B1P0C2W7 299 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-211ENST00000533012 DZIP3Q86Y13 1208 aaKnown RBP14.44□□□□□ -0.1
TRAPPC4-211ENST00000533012 ZNF428Q96B54 188 aa14.44□□□□□ -0.1
TRAPPC4-211ENST00000533012 PDGFDQ9GZP0 370 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-211ENST00000533012 NARFQ9UHQ1 456 aa14.44□□□□□ -0.1
TRAPPC4-211ENST00000533012 TBC1D2BQ9UPU7 963 aa14.44□□□□□ -0.1
TRAPPC4-211ENST00000533012 TAF1LQ8IZX4 1826 aa14.43□□□□□ -0.1
TRAPPC4-211ENST00000533012 ANXA1P04083 346 aa14.43□□□□□ -0.1
TRAPPC4-211ENST00000533012 SLC4A2P04920 1241 aa14.43□□□□□ -0.1
TRAPPC4-211ENST00000533012 PROSER3Q2NL68 480 aa14.43□□□□□ -0.1
TRAPPC4-211ENST00000533012 COPS6Q7L5N1 327 aa14.43□□□□□ -0.1
TRAPPC4-211ENST00000533012 COL15A1P39059 1388 aa14.43□□□□□ -0.1
TRAPPC4-211ENST00000533012 COL5A3P25940 1745 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC4-211ENST00000533012 TCERG1O14776 1098 aaKnown RBP14.42□□□□□ -0.1
TRAPPC4-211ENST00000533012 AIMP1Q12904 312 aaKnown RBP14.42□□□□□ -0.1
TRAPPC4-211ENST00000533012 KIF6Q6ZMV9 814 aa14.42□□□□□ -0.1
TRAPPC4-211ENST00000533012 NLGN1Q8N2Q7 840 aa14.42□□□□□ -0.1
TRAPPC4-211ENST00000533012 MTFR1LQ9H019 292 aa14.42□□□□□ -0.1
TRAPPC4-211ENST00000533012 ZBTB7AO95365 584 aa14.41□□□□□ -0.1
TRAPPC4-211ENST00000533012 USPL1Q5W0Q7 1092 aa14.41□□□□□ -0.1
TRAPPC4-211ENST00000533012 LRP10Q7Z4F1 713 aa14.41□□□□□ -0.1
TRAPPC4-211ENST00000533012 XAGE3Q8WTP9 111 aa14.41□□□□□ -0.1
TRAPPC4-211ENST00000533012 SRP68Q9UHB9 627 aaKnown RBP14.41□□□□□ -0.1
TRAPPC4-211ENST00000533012 ATF5Q9Y2D1 282 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-211ENST00000533012 USP42Q9H9J4 1324 aaKnown RBP14.41□□□□□ -0.1
TRAPPC4-211ENST00000533012 ERVV-1B6SEH8 477 aa14.4□□□□□ -0.1
TRAPPC4-211ENST00000533012 GYS1P13807 737 aa14.4□□□□□ -0.1
TRAPPC4-211ENST00000533012 TTLL7Q6ZT98 887 aa14.4□□□□□ -0.1
TRAPPC4-211ENST00000533012 CAMTA2O94983 1202 aa14.39□□□□□ -0.11
TRAPPC4-211ENST00000533012 ALDH1L2Q3SY69 923 aa14.39□□□□□ -0.11
TRAPPC4-211ENST00000533012 CLEC4GQ6UXB4 293 aa14.39□□□□□ -0.11
TRAPPC4-211ENST00000533012 ANKRD13DQ6ZTN6 518 aa14.39□□□□□ -0.11
TRAPPC4-211ENST00000533012 PHAXQ9H814 394 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-211ENST00000533012 SPON1Q9HCB6 807 aa14.39□□□□□ -0.11
TRAPPC4-211ENST00000533012 ZNF652Q9Y2D9 606 aa14.39□□□□□ -0.11
TRAPPC4-211ENST00000533012 MYH14Q7Z406 1995 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-211ENST00000533012 RGL2O15211 777 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms