RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 DCDC2BA2VCK2 349 aa11.15□□□□□ -0.62
PTPRK-220ENST00000531466 ATXN7O15265 892 aaPredicted RBP11.15□□□□□ -0.62
PTPRK-220ENST00000531466 ARAFP10398 606 aa11.15□□□□□ -0.62
PTPRK-220ENST00000531466 ALYREFQ86V81 257 aaKnown RBP11.15□□□□□ -0.62
PTPRK-220ENST00000531466 C1orf216Q8TAB5 229 aa11.15□□□□□ -0.62
PTPRK-220ENST00000531466 MAP7D1Q3KQU3 841 aa11.14□□□□□ -0.63
PTPRK-220ENST00000531466 ARSJQ5FYB0 599 aaPredicted RBP11.14□□□□□ -0.63
PTPRK-220ENST00000531466 XP32Q5T750 250 aa11.14□□□□□ -0.63
PTPRK-220ENST00000531466 NLRP8Q86W28 1048 aa11.14□□□□□ -0.63
PTPRK-220ENST00000531466 A0A1W2PNR3 127 aa11.13□□□□□ -0.63
PTPRK-220ENST00000531466 GNB5O14775 395 aa11.13□□□□□ -0.63
PTPRK-220ENST00000531466 FURINP09958 794 aa11.13□□□□□ -0.63
PTPRK-220ENST00000531466 CD33P20138 364 aa11.13□□□□□ -0.63
PTPRK-220ENST00000531466 HCN2Q9UL51 889 aa11.13□□□□□ -0.63
PTPRK-220ENST00000531466 USP3Q9Y6I4 520 aa11.13□□□□□ -0.63
PTPRK-220ENST00000531466 TMEM229AB2RXF0 380 aa11.11□□□□□ -0.63
PTPRK-220ENST00000531466 KHNYNO15037 678 aaKnown RBP11.11□□□□□ -0.63
PTPRK-220ENST00000531466 MAPTP10636 758 aaKnown RBP11.11□□□□□ -0.63
PTPRK-220ENST00000531466 DGKGP49619 791 aa11.11□□□□□ -0.63
PTPRK-220ENST00000531466 TNP2Q05952 138 aa11.11□□□□□ -0.63
PTPRK-220ENST00000531466 SEMA3FQ13275 785 aa11.11□□□□□ -0.63
PTPRK-220ENST00000531466 NBPF1Q3BBV0 1214 aa11.11□□□□□ -0.63
PTPRK-220ENST00000531466 ZNF295-AS1Q8N0V1 137 aa11.11□□□□□ -0.63
PTPRK-220ENST00000531466 PIK3R2O00459 728 aa11.1□□□□□ -0.63
PTPRK-220ENST00000531466 TPRNQ4KMQ1 711 aa11.1□□□□□ -0.63
PTPRK-220ENST00000531466 PIK3CDO00329 1044 aa11.09□□□□□ -0.63
PTPRK-220ENST00000531466 TATP17735 454 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-220ENST00000531466 ADH6P28332 368 aa11.09□□□□□ -0.63
PTPRK-220ENST00000531466 WASHC4Q2M389 1173 aa11.09□□□□□ -0.63
PTPRK-220ENST00000531466 CHSY3Q70JA7 882 aa11.09□□□□□ -0.63
PTPRK-220ENST00000531466 KLF15Q9UIH9 416 aa11.09□□□□□ -0.63
PTPRK-220ENST00000531466 IQSEC3Q9UPP2 1182 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-220ENST00000531466 A6NJY4 79 aa11.08□□□□□ -0.64
PTPRK-220ENST00000531466 C1QTNF9BB2RNN3 333 aa11.08□□□□□ -0.64
PTPRK-220ENST00000531466 CDK2AP1O14519 115 aa11.08□□□□□ -0.64
PTPRK-220ENST00000531466 FCHSD1Q86WN1 690 aa11.08□□□□□ -0.64
PTPRK-220ENST00000531466 SLC4A9Q96Q91 983 aa11.08□□□□□ -0.64
PTPRK-220ENST00000531466 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
PTPRK-220ENST00000531466 MTFR1Q15390 333 aa11.07□□□□□ -0.64
PTPRK-220ENST00000531466 CD163Q86VB7 1156 aa11.07□□□□□ -0.64
PTPRK-220ENST00000531466 ZIC5Q96T25 663 aa11.07□□□□□ -0.64
PTPRK-220ENST00000531466 PARP3Q9Y6F1 533 aa11.07□□□□□ -0.64
PTPRK-220ENST00000531466 GJA3Q9Y6H8 435 aa11.07□□□□□ -0.64
PTPRK-220ENST00000531466 FAM182BQ5T319 152 aa11.06□□□□□ -0.64
PTPRK-220ENST00000531466 ZDHHC3Q9NYG2 299 aa11.06□□□□□ -0.64
PTPRK-220ENST00000531466 PCDHGA11Q9Y5H2 935 aa11.06□□□□□ -0.64
PTPRK-220ENST00000531466 CHRNA4P43681 627 aa11.05□□□□□ -0.64
PTPRK-220ENST00000531466 PCBP4P57723 403 aaKnown RBP11.05□□□□□ -0.64
PTPRK-220ENST00000531466 NOP53Q9NZM5 478 aaKnown RBP11.05□□□□□ -0.64
PTPRK-220ENST00000531466 FAM157BP0CG42 384 aa11.04□□□□□ -0.64
PTPRK-220ENST00000531466 SOX11P35716 441 aa11.04□□□□□ -0.64
PTPRK-220ENST00000531466 BICDL1Q6ZP65 573 aa11.04□□□□□ -0.64
PTPRK-220ENST00000531466 STRN4Q9NRL3 753 aa11.04□□□□□ -0.64
PTPRK-220ENST00000531466 PRR12Q9ULL5 1215 aa11.04□□□□□ -0.64
PTPRK-220ENST00000531466 AVENQ9NQS1 362 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-220ENST00000531466 TXLNAP40222 546 aa11.02□□□□□ -0.65
PTPRK-220ENST00000531466 MCM6Q14566 821 aa11.02□□□□□ -0.65
PTPRK-220ENST00000531466 ZNF468Q5VIY5 522 aaPredicted RBP11.02□□□□□ -0.65
PTPRK-220ENST00000531466 SKIP12755 728 aa11.01□□□□□ -0.65
PTPRK-220ENST00000531466 EML3Q32P44 896 aa11.01□□□□□ -0.65
PTPRK-220ENST00000531466 GTF2IP78347 998 aa11□□□□□ -0.65
PTPRK-220ENST00000531466 PSME1Q06323 249 aa11□□□□□ -0.65
PTPRK-220ENST00000531466 SERBP1Q8NC51 408 aaKnown RBP eCLIP11□□□□□ -0.65
PTPRK-220ENST00000531466 ZDHHC1Q8WTX9 485 aa11□□□□□ -0.65
PTPRK-220ENST00000531466 TRIM11Q96F44 468 aa11□□□□□ -0.65
PTPRK-220ENST00000531466 MARK1Q9P0L2 795 aa11□□□□□ -0.65
PTPRK-220ENST00000531466 NOD1Q9Y239 953 aa11□□□□□ -0.65
PTPRK-220ENST00000531466 BACH1O14867 736 aa10.99□□□□□ -0.65
PTPRK-220ENST00000531466 SAMD5Q5TGI4 173 aa10.99□□□□□ -0.65
PTPRK-220ENST00000531466 ZNF358Q9NW07 568 aa10.99□□□□□ -0.65
PTPRK-220ENST00000531466 SCHIP1Q9P0W5 487 aaPredicted RBP10.99□□□□□ -0.65
PTPRK-220ENST00000531466 EFSO43281 561 aa10.98□□□□□ -0.65
PTPRK-220ENST00000531466 Q8N3U1 123 aa10.98□□□□□ -0.65
PTPRK-220ENST00000531466 PLVAPQ9BX97 442 aa10.98□□□□□ -0.65
PTPRK-220ENST00000531466 TBCELQ5QJ74 424 aa10.97□□□□□ -0.65
PTPRK-220ENST00000531466 LRRC69Q6ZNQ3 347 aa10.97□□□□□ -0.65
PTPRK-220ENST00000531466 L3MBTL2Q969R5 705 aa10.97□□□□□ -0.65
PTPRK-220ENST00000531466 COG6Q9Y2V7 657 aa10.97□□□□□ -0.65
PTPRK-220ENST00000531466 NCOA4Q13772 614 aa10.96□□□□□ -0.65
PTPRK-220ENST00000531466 DOC2BQ14184 412 aa10.96□□□□□ -0.65
PTPRK-220ENST00000531466 LAMC2Q13753 1193 aa10.95□□□□□ -0.66
PTPRK-220ENST00000531466 SYT9Q86SS6 491 aa10.95□□□□□ -0.66
PTPRK-220ENST00000531466 DEPDC4Q8N2C3 294 aa10.95□□□□□ -0.66
PTPRK-220ENST00000531466 ZNF232Q9UNY5 417 aa10.95□□□□□ -0.66
PTPRK-220ENST00000531466 NOS2P35228 1153 aa10.94□□□□□ -0.66
PTPRK-220ENST00000531466 TEAD4Q15561 434 aa10.94□□□□□ -0.66
PTPRK-220ENST00000531466 SLC9A9Q8IVB4 645 aa10.94□□□□□ -0.66
PTPRK-220ENST00000531466 TNS4Q8IZW8 715 aa10.94□□□□□ -0.66
PTPRK-220ENST00000531466 ALG2Q9H553 416 aa10.94□□□□□ -0.66
PTPRK-220ENST00000531466 ELOA3CA0A087WX78 387 aaPredicted RBP10.93□□□□□ -0.66
PTPRK-220ENST00000531466 ELOA3DA6NLF2 546 aaPredicted RBP10.93□□□□□ -0.66
PTPRK-220ENST00000531466 EPHA4P54764 986 aa10.93□□□□□ -0.66
PTPRK-220ENST00000531466 ELOA3BQ3SY89 546 aa10.93□□□□□ -0.66
PTPRK-220ENST00000531466 ELOA3Q8NG57 546 aa10.93□□□□□ -0.66
PTPRK-220ENST00000531466 ALAS2P22557 587 aa10.92□□□□□ -0.66
PTPRK-220ENST00000531466 NFATC2IPQ8NCF5 419 aa10.92□□□□□ -0.66
PTPRK-220ENST00000531466 SEMA6BQ9H3T3 888 aa10.92□□□□□ -0.66
PTPRK-220ENST00000531466 NEUROD4Q9HD90 331 aa10.92□□□□□ -0.66
PTPRK-220ENST00000531466 USP17L5A8MUK1 530 aa10.91□□□□□ -0.66
PTPRK-220ENST00000531466 EML1O00423 815 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms