RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 MIS18AQ9NYP9 233 aa22.21■■□□□ 1.15
SF3B2-209ENST00000530322 ZBTB1Q9Y2K1 713 aa22.21■■□□□ 1.15
SF3B2-209ENST00000530322 RFC4P35249 363 aa22.2■■□□□ 1.14
SF3B2-209ENST00000530322 LMOD3Q0VAK6 560 aa22.2■■□□□ 1.14
SF3B2-209ENST00000530322 PNISRQ8TF01 805 aaKnown RBP22.2■■□□□ 1.14
SF3B2-209ENST00000530322 SYT17Q9BSW7 474 aa22.2■■□□□ 1.14
SF3B2-209ENST00000530322 SOS1Q07889 1333 aaPredicted RBP22.2■■□□□ 1.14
SF3B2-209ENST00000530322 NEUROD2Q15784 382 aa22.19■■□□□ 1.14
SF3B2-209ENST00000530322 GYS1P13807 737 aa22.18■■□□□ 1.14
SF3B2-209ENST00000530322 SNRPA1P09661 255 aaKnown RBP22.17■■□□□ 1.14
SF3B2-209ENST00000530322 MRS2Q9HD23 443 aa22.17■■□□□ 1.14
SF3B2-209ENST00000530322 TRIM35Q9UPQ4 493 aa22.17■■□□□ 1.14
SF3B2-209ENST00000530322 COL15A1P39059 1388 aa22.16■■□□□ 1.14
SF3B2-209ENST00000530322 USP42Q9H9J4 1324 aaKnown RBP22.16■■□□□ 1.14
SF3B2-209ENST00000530322 PRAMEF22A3QJZ6 481 aa22.16■■□□□ 1.14
SF3B2-209ENST00000530322 NLGN1Q8N2Q7 840 aa22.16■■□□□ 1.14
SF3B2-209ENST00000530322 USP16Q9Y5T5 823 aa22.16■■□□□ 1.14
SF3B2-209ENST00000530322 CANXP27824 592 aaKnown RBP22.15■■□□□ 1.14
SF3B2-209ENST00000530322 SRP68Q9UHB9 627 aaKnown RBP22.15■■□□□ 1.14
SF3B2-209ENST00000530322 LAMB4A4D0S4 1761 aa22.15■■□□□ 1.14
SF3B2-209ENST00000530322 APAF1O14727 1248 aa22.14■■□□□ 1.13
SF3B2-209ENST00000530322 EIF5P55010 431 aaKnown RBP22.14■■□□□ 1.13
SF3B2-209ENST00000530322 EIF4A1P60842 406 aaKnown RBP22.14■■□□□ 1.13
SF3B2-209ENST00000530322 A1BGP04217 495 aa22.13■■□□□ 1.13
SF3B2-209ENST00000530322 MMP10P09238 476 aa22.13■■□□□ 1.13
SF3B2-209ENST00000530322 KLHL34Q8N239 644 aa22.13■■□□□ 1.13
SF3B2-209ENST00000530322 BABAM1Q9NWV8 329 aa22.12■■□□□ 1.13
SF3B2-209ENST00000530322 TSPYL4Q9UJ04 414 aa22.12■■□□□ 1.13
SF3B2-209ENST00000530322 ZPR1O75312 459 aa22.11■■□□□ 1.13
SF3B2-209ENST00000530322 GIGYF1O75420 1035 aaPredicted RBP22.11■■□□□ 1.13
SF3B2-209ENST00000530322 IL6STP40189 918 aaPredicted RBP22.11■■□□□ 1.13
SF3B2-209ENST00000530322 NARFQ9UHQ1 456 aa22.11■■□□□ 1.13
SF3B2-209ENST00000530322 FKBP8Q14318 412 aa22.1■■□□□ 1.13
SF3B2-209ENST00000530322 USPL1Q5W0Q7 1092 aa22.1■■□□□ 1.13
SF3B2-209ENST00000530322 NLGN2Q8NFZ4 835 aa22.09■■□□□ 1.13
SF3B2-209ENST00000530322 CD2APQ9Y5K6 639 aa22.09■■□□□ 1.13
SF3B2-209ENST00000530322 A0A087WZG4 1122 aa22.08■■□□□ 1.13
SF3B2-209ENST00000530322 CHL1O00533 1208 aa22.08■■□□□ 1.13
SF3B2-209ENST00000530322 KIF13BQ9NQT8 1826 aa22.08■■□□□ 1.12
SF3B2-209ENST00000530322 SCN7AQ01118 1682 aa22.07■■□□□ 1.12
SF3B2-209ENST00000530322 PIP4K2AP48426 406 aaPredicted RBP22.07■■□□□ 1.12
SF3B2-209ENST00000530322 BCL2L12Q9HB09 334 aa22.07■■□□□ 1.12
SF3B2-209ENST00000530322 ZNF330Q9Y3S2 320 aaPredicted RBP22.07■■□□□ 1.12
SF3B2-209ENST00000530322 NBPF26B4DH59 902 aa22.06■■□□□ 1.12
SF3B2-209ENST00000530322 TM4SF1P30408 202 aa22.06■■□□□ 1.12
SF3B2-209ENST00000530322 NBPF10Q6P3W6 841 aaKnown RBP22.06■■□□□ 1.12
SF3B2-209ENST00000530322 NBPF15Q8N660 670 aa22.06■■□□□ 1.12
SF3B2-209ENST00000530322 TBC1D2BQ9UPU7 963 aa22.05■■□□□ 1.12
SF3B2-209ENST00000530322 PARP3Q9Y6F1 533 aa22.05■■□□□ 1.12
SF3B2-209ENST00000530322 BCORQ6W2J9 1755 aa22.04■■□□□ 1.12
SF3B2-209ENST00000530322 DDR1Q08345 913 aa22.04■■□□□ 1.12
SF3B2-209ENST00000530322 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
SF3B2-209ENST00000530322 DCAF8L1A6NGE4 600 aa22.03■■□□□ 1.12
SF3B2-209ENST00000530322 NPM2Q86SE8 214 aaKnown RBP22.03■■□□□ 1.12
SF3B2-209ENST00000530322 CFAP44Q96MT7 982 aa22.03■■□□□ 1.12
SF3B2-209ENST00000530322 C10orf71Q711Q0 1435 aa22.03■■□□□ 1.12
SF3B2-209ENST00000530322 GOLGB1Q14789 3259 aaKnown RBP22.02■■□□□ 1.12
SF3B2-209ENST00000530322 AFDNP55196 1824 aaKnown RBP22.02■■□□□ 1.12
SF3B2-209ENST00000530322 POLRMTO00411 1230 aaKnown RBP22.02■■□□□ 1.12
SF3B2-209ENST00000530322 NFIXQ14938 502 aa22.02■■□□□ 1.12
SF3B2-209ENST00000530322 DZIP3Q86Y13 1208 aaKnown RBP22.02■■□□□ 1.12
SF3B2-209ENST00000530322 KIAA1551Q9HCM1 1747 aa22.01■■□□□ 1.11
SF3B2-209ENST00000530322 CAMTA2O94983 1202 aa22.01■■□□□ 1.11
SF3B2-209ENST00000530322 ZNF853P0CG23 659 aa22.01■■□□□ 1.11
SF3B2-209ENST00000530322 NRXN2Q9P2S2 1712 aa22■■□□□ 1.11
SF3B2-209ENST00000530322 CALD1Q05682 793 aaKnown RBP22■■□□□ 1.11
SF3B2-209ENST00000530322 SENP3-EIF4A1A0A087X0R7 540 aa21.99■■□□□ 1.11
SF3B2-209ENST00000530322 CCDC27Q2M243 656 aa21.99■■□□□ 1.11
SF3B2-209ENST00000530322 KRT24Q2M2I5 525 aa21.99■■□□□ 1.11
SF3B2-209ENST00000530322 FAM9BQ8IZU0 186 aa21.99■■□□□ 1.11
SF3B2-209ENST00000530322 MBIPQ9NS73 344 aa21.99■■□□□ 1.11
SF3B2-209ENST00000530322 IFT57Q9NWB7 429 aa21.99■■□□□ 1.11
SF3B2-209ENST00000530322 N4BP2Q86UW6 1770 aaPredicted RBP21.98■■□□□ 1.11
SF3B2-209ENST00000530322 NCBP3Q53F19 620 aaKnown RBP21.98■■□□□ 1.11
SF3B2-209ENST00000530322 TBC1D9BQ66K14 1250 aa21.98■■□□□ 1.11
SF3B2-209ENST00000530322 ERBB4Q15303 1308 aa21.98■■□□□ 1.11
SF3B2-209ENST00000530322 PXDNLA1KZ92 1463 aa21.97■■□□□ 1.11
SF3B2-209ENST00000530322 GNAI1P63096 354 aa21.97■■□□□ 1.11
SF3B2-209ENST00000530322 UTRNP46939 3433 aa21.96■■□□□ 1.11
SF3B2-209ENST00000530322 EIF2S2P20042 333 aaKnown RBP21.96■■□□□ 1.11
SF3B2-209ENST00000530322 GPR162Q16538 588 aa21.96■■□□□ 1.11
SF3B2-209ENST00000530322 BICDL1Q6ZP65 573 aa21.96■■□□□ 1.11
SF3B2-209ENST00000530322 WWC1Q8IX03 1113 aa21.96■■□□□ 1.11
SF3B2-209ENST00000530322 SERPINB2P05120 415 aa21.95■■□□□ 1.1
SF3B2-209ENST00000530322 MYL6BP14649 208 aa21.95■■□□□ 1.1
SF3B2-209ENST00000530322 TGFB2P61812 414 aa21.95■■□□□ 1.1
SF3B2-209ENST00000530322 PDIA6Q15084 440 aa21.95■■□□□ 1.1
SF3B2-209ENST00000530322 CLEC4GQ6UXB4 293 aa21.95■■□□□ 1.1
SF3B2-209ENST00000530322 RGL2O15211 777 aa21.94■■□□□ 1.1
SF3B2-209ENST00000530322 YBX3P16989 372 aaKnown RBP eCLIP21.94■■□□□ 1.16e-11■□□□□ 9.7
SF3B2-209ENST00000530322 LRP10Q7Z4F1 713 aa21.94■■□□□ 1.1
SF3B2-209ENST00000530322 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
SF3B2-209ENST00000530322 NGEFQ8N5V2 710 aa21.94■■□□□ 1.1
SF3B2-209ENST00000530322 HOXB7P09629 217 aa21.93■■□□□ 1.1
SF3B2-209ENST00000530322 BRCA1P38398 1863 aaKnown RBP21.93■■□□□ 1.1
SF3B2-209ENST00000530322 NUP98P52948 1817 aa21.93■■□□□ 1.1
SF3B2-209ENST00000530322 CARMIL3Q8ND23 1372 aa21.92■■□□□ 1.1
SF3B2-209ENST00000530322 A0A0G2JLW4 131 aa21.92■■□□□ 1.1
SF3B2-209ENST00000530322 TTLL7Q6ZT98 887 aa21.92■■□□□ 1.1
SF3B2-209ENST00000530322 NECTIN2Q92692 538 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms