RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 GNG11P61952 73 aa8.88□□□□□ -0.99
CTNND1-223ENST00000529986 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.88□□□□□ -0.991e-7■■■□□ 16.3
CTNND1-223ENST00000529986 ZNF165P49910 485 aa8.87□□□□□ -0.99
CTNND1-223ENST00000529986 SPECC1Q5M775 1068 aa8.87□□□□□ -0.99
CTNND1-223ENST00000529986 PAF1Q8N7H5 531 aa8.87□□□□□ -0.99
CTNND1-223ENST00000529986 ZNF397Q8NF99 534 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-223ENST00000529986 HLTFQ14527 1009 aaKnown RBP eCLIP8.87□□□□□ -0.995e-6■□□□□ 9.8
CTNND1-223ENST00000529986 IMMTQ16891 758 aaKnown RBP8.87□□□□□ -0.99
CTNND1-223ENST00000529986 FSIP1Q8NA03 581 aa8.87□□□□□ -0.99
CTNND1-223ENST00000529986 ANKRD30BQ9BXX2 1392 aa8.87□□□□□ -0.99
CTNND1-223ENST00000529986 RARSP54136 660 aaKnown RBP8.87□□□□□ -0.99
CTNND1-223ENST00000529986 MCM6Q14566 821 aa8.87□□□□□ -0.99
CTNND1-223ENST00000529986 RPAP2Q8IXW5 612 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-223ENST00000529986 CCDC12Q8WUD4 166 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-223ENST00000529986 CDKL5O76039 1030 aa8.87□□□□□ -0.99
CTNND1-223ENST00000529986 LRSAM1Q6UWE0 723 aa8.87□□□□□ -0.99
CTNND1-223ENST00000529986 CCDC82Q8N4S0 544 aa8.87□□□□□ -0.99
CTNND1-223ENST00000529986 SSH1Q8WYL5 1049 aa8.87□□□□□ -0.99
CTNND1-223ENST00000529986 SLC3A2P08195 630 aaKnown RBP8.87□□□□□ -0.99
CTNND1-223ENST00000529986 NF2P35240 595 aa8.87□□□□□ -0.99
CTNND1-223ENST00000529986 IRX3P78415 501 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-223ENST00000529986 SF3B2Q13435 895 aaKnown RBP8.87□□□□□ -0.99
CTNND1-223ENST00000529986 GJB2P29033 226 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 TBC1D9Q6ZT07 1266 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 MAATS1Q7Z4T9 603 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 TBC1D32Q96NH3 1257 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 CCDC85AQ96PX6 553 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-223ENST00000529986 ITSN2Q9NZM3 1697 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 RAB11FIP3O75154 756 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 CCDC175P0C221 793 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 KRT32Q14532 448 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 CCDC186Q7Z3E2 898 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 PAXBP1Q9Y5B6 917 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 RPGRIP1LQ68CZ1 1315 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 PLB1Q6P1J6 1458 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 CFAP43Q8NDM7 1665 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 MCM3P25205 808 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 CCT2P78371 535 aaKnown RBP8.86□□□□□ -0.99
CTNND1-223ENST00000529986 HSP90AA4PQ58FG1 418 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 CCDC94Q9BW85 323 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-223ENST00000529986 NACAP1Q9BZK3 213 aa8.86□□□□□ -0.99
CTNND1-223ENST00000529986 NEMFO60524 1076 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 PAFAH1B1P43034 410 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 SOGA3Q5TF21 947 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 MICALL1Q8N3F8 863 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 BOLA2Q9H3K6 86 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 ATF3P18847 181 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 TDO2P48775 406 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 GSDMDP57764 484 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 TSHZ3Q63HK5 1081 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 CACNA2D4Q7Z3S7 1137 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 C10orf67Q8IYJ2 551 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 UBAC1Q9BSL1 405 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 LIMCH1Q9UPQ0 1083 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 SPG7Q9UQ90 795 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 RAPGEF6Q8TEU7 1601 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 STX6O43752 255 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 RRAGDQ9NQL2 400 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-223ENST00000529986 DNAI1Q9UI46 699 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 ZKSCAN5Q9Y2L8 839 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 GSTTP1A0A1W2PQM5 241 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 CCDC57Q2TAC2 916 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 TMPOP42166 694 aaKnown RBP8.85□□□□□ -0.99
CTNND1-223ENST00000529986 CNNM3Q8NE01 707 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 C8orf76Q96K31 380 aa8.85□□□□□ -0.99
CTNND1-223ENST00000529986 RBM42Q9BTD8 480 aaKnown RBP8.85□□□□□ -0.99
CTNND1-223ENST00000529986 DDX19AQ9NUU7 478 aaKnown RBP8.85□□□□□ -0.99
CTNND1-223ENST00000529986 PRIM1P49642 420 aaKnown RBP8.84□□□□□ -0.99
CTNND1-223ENST00000529986 RRS1Q15050 365 aaKnown RBP8.84□□□□□ -0.99
CTNND1-223ENST00000529986 STX1AQ16623 288 aa8.84□□□□□ -0.99
CTNND1-223ENST00000529986 TDRD12Q587J7 1177 aaKnown RBP8.84□□□□□ -0.99
CTNND1-223ENST00000529986 BMP2KQ9NSY1 1161 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-223ENST00000529986 SERPINA10Q9UK55 444 aa8.84□□□□□ -0.99
CTNND1-223ENST00000529986 SKILP12757 684 aa8.84□□□□□ -0.99
CTNND1-223ENST00000529986 UGGT2Q9NYU1 1516 aa8.84□□□□□ -0.99
CTNND1-223ENST00000529986 VGLL3A8MV65 326 aa8.84□□□□□ -0.99
CTNND1-223ENST00000529986 SMC1AQ14683 1233 aaKnown RBP8.84□□□□□ -0.99
CTNND1-223ENST00000529986 PRAM1Q96QH2 718 aa8.84□□□□□ -0.99
CTNND1-223ENST00000529986 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.84□□□□□ -0.997e-6■□□□□ 8.3
CTNND1-223ENST00000529986 CABP1Q9NZU7 370 aa8.84□□□□□ -0.99
CTNND1-223ENST00000529986 IDH1O75874 414 aaKnown RBP8.84□□□□□ -0.99
CTNND1-223ENST00000529986 UVSSAQ2YD98 709 aa8.84□□□□□ -0.99
CTNND1-223ENST00000529986 GTPBP4Q9BZE4 634 aaKnown RBP8.84□□□□□ -0.99
CTNND1-223ENST00000529986 JADE2Q9NQC1 790 aa8.84□□□□□ -0.99
CTNND1-223ENST00000529986 HMGB2P26583 209 aaKnown RBP8.83□□□□□ -1
CTNND1-223ENST00000529986 CCDC91Q7Z6B0 441 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 ABTB2Q8N961 1025 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 CTNNA3Q9UI47 895 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 CNPY2Q9Y2B0 182 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 POTEB2H3BUK9 544 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 CAPN2P17655 700 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 ANO6Q4KMQ2 910 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 FKBP15Q5T1M5 1219 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 CTNNBL1Q8WYA6 563 aaPredicted RBP8.83□□□□□ -1
CTNND1-223ENST00000529986 MACROD2A1Z1Q3 448 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 F6X3S4 739 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 CTAGE5O15320 804 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 PHACTR2O75167 634 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 YEATS4O95619 227 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 KIF6Q6ZMV9 814 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms