RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 APAF1O14727 1248 aa16.66■□□□□ 0.26
CCDC90B-216ENST00000529856 ARHGEF1Q92888 912 aaKnown RBP16.66■□□□□ 0.26
CCDC90B-216ENST00000529856 PPP1R1BQ9UD71 204 aaPredicted RBP16.66■□□□□ 0.26
CCDC90B-216ENST00000529856 STARD3NLO95772 234 aa16.65■□□□□ 0.26
CCDC90B-216ENST00000529856 SNRPA1P09661 255 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-216ENST00000529856 POLD1P28340 1107 aa16.64■□□□□ 0.25
CCDC90B-216ENST00000529856 RFC4P35249 363 aa16.63■□□□□ 0.25
CCDC90B-216ENST00000529856 MSL1Q68DK7 614 aa16.63■□□□□ 0.25
CCDC90B-216ENST00000529856 ARXQ96QS3 562 aa16.63■□□□□ 0.25
CCDC90B-216ENST00000529856 BABAM1Q9NWV8 329 aa16.63■□□□□ 0.25
CCDC90B-216ENST00000529856 ZBTB1Q9Y2K1 713 aa16.63■□□□□ 0.25
CCDC90B-216ENST00000529856 USP16Q9Y5T5 823 aa16.63■□□□□ 0.25
CCDC90B-216ENST00000529856 KDM3BQ7LBC6 1761 aa16.62■□□□□ 0.25
CCDC90B-216ENST00000529856 EIF4A1P60842 406 aaKnown RBP16.62■□□□□ 0.25
CCDC90B-216ENST00000529856 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
CCDC90B-216ENST00000529856 PRAMEF22A3QJZ6 481 aa16.61■□□□□ 0.25
CCDC90B-216ENST00000529856 CANXP27824 592 aaKnown RBP16.61■□□□□ 0.25
CCDC90B-216ENST00000529856 TSPYL4Q9UJ04 414 aa16.61■□□□□ 0.25
CCDC90B-216ENST00000529856 A1BGP04217 495 aa16.6■□□□□ 0.25
CCDC90B-216ENST00000529856 EIF5P55010 431 aaKnown RBP16.6■□□□□ 0.25
CCDC90B-216ENST00000529856 CHL1O00533 1208 aa16.59■□□□□ 0.25
CCDC90B-216ENST00000529856 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-216ENST00000529856 GYS1P13807 737 aa16.59■□□□□ 0.25
CCDC90B-216ENST00000529856 NLGN1Q8N2Q7 840 aa16.59■□□□□ 0.25
CCDC90B-216ENST00000529856 FAM9BQ8IZU0 186 aa16.58■□□□□ 0.24
CCDC90B-216ENST00000529856 FHDC1Q9C0D6 1143 aaPredicted RBP16.58■□□□□ 0.24
CCDC90B-216ENST00000529856 SRP68Q9UHB9 627 aaKnown RBP16.58■□□□□ 0.24
CCDC90B-216ENST00000529856 USP42Q9H9J4 1324 aaKnown RBP16.58■□□□□ 0.24
CCDC90B-216ENST00000529856 C4AP0C0L4 1744 aa16.58■□□□□ 0.24
CCDC90B-216ENST00000529856 COL15A1P39059 1388 aa16.57■□□□□ 0.24
CCDC90B-216ENST00000529856 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
CCDC90B-216ENST00000529856 NARFQ9UHQ1 456 aa16.57■□□□□ 0.24
CCDC90B-216ENST00000529856 LAS1LQ9Y4W2 734 aaKnown RBP16.57■□□□□ 0.24
CCDC90B-216ENST00000529856 A0A087WZG4 1122 aa16.56■□□□□ 0.24
CCDC90B-216ENST00000529856 ZPR1O75312 459 aa16.56■□□□□ 0.24
CCDC90B-216ENST00000529856 CCDC27Q2M243 656 aa16.56■□□□□ 0.24
CCDC90B-216ENST00000529856 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-216ENST00000529856 CFAP44Q96MT7 982 aa16.56■□□□□ 0.24
CCDC90B-216ENST00000529856 SYT17Q9BSW7 474 aa16.56■□□□□ 0.24
CCDC90B-216ENST00000529856 ZNF853P0CG23 659 aa16.55■□□□□ 0.24
CCDC90B-216ENST00000529856 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
CCDC90B-216ENST00000529856 USPL1Q5W0Q7 1092 aa16.55■□□□□ 0.24
CCDC90B-216ENST00000529856 SENP3-EIF4A1A0A087X0R7 540 aa16.54■□□□□ 0.24
CCDC90B-216ENST00000529856 NBPF26B4DH59 902 aa16.54■□□□□ 0.24
CCDC90B-216ENST00000529856 CCER2I3L3R5 266 aa16.54■□□□□ 0.24
CCDC90B-216ENST00000529856 MMP10P09238 476 aa16.54■□□□□ 0.24
CCDC90B-216ENST00000529856 FKBP8Q14318 412 aa16.54■□□□□ 0.24
CCDC90B-216ENST00000529856 NBPF10Q6P3W6 841 aaKnown RBP16.54■□□□□ 0.24
CCDC90B-216ENST00000529856 NBPF15Q8N660 670 aa16.54■□□□□ 0.24
CCDC90B-216ENST00000529856 PIP4K2AP48426 406 aaPredicted RBP16.53■□□□□ 0.24
CCDC90B-216ENST00000529856 DIEXFQ68CQ4 756 aaKnown RBP16.53■□□□□ 0.24
CCDC90B-216ENST00000529856 NPM2Q86SE8 214 aaKnown RBP16.53■□□□□ 0.24
CCDC90B-216ENST00000529856 WWC1Q8IX03 1113 aa16.53■□□□□ 0.24
CCDC90B-216ENST00000529856 BCL2L12Q9HB09 334 aa16.53■□□□□ 0.24
CCDC90B-216ENST00000529856 IFT57Q9NWB7 429 aa16.53■□□□□ 0.24
CCDC90B-216ENST00000529856 ZNF330Q9Y3S2 320 aaPredicted RBP16.53■□□□□ 0.24
CCDC90B-216ENST00000529856 LAMB4A4D0S4 1761 aa16.52■□□□□ 0.24
CCDC90B-216ENST00000529856 TM4SF1P30408 202 aa16.52■□□□□ 0.24
CCDC90B-216ENST00000529856 GNAI1P63096 354 aa16.52■□□□□ 0.24
CCDC90B-216ENST00000529856 MBIPQ9NS73 344 aa16.52■□□□□ 0.24
CCDC90B-216ENST00000529856 TBC1D2BQ9UPU7 963 aa16.52■□□□□ 0.24
CCDC90B-216ENST00000529856 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
CCDC90B-216ENST00000529856 CD2APQ9Y5K6 639 aa16.51■□□□□ 0.23
CCDC90B-216ENST00000529856 PARP3Q9Y6F1 533 aa16.51■□□□□ 0.23
CCDC90B-216ENST00000529856 KRT24Q2M2I5 525 aa16.5■□□□□ 0.23
CCDC90B-216ENST00000529856 ERBB4Q15303 1308 aa16.49■□□□□ 0.23
CCDC90B-216ENST00000529856 CAMTA2O94983 1202 aa16.49■□□□□ 0.23
CCDC90B-216ENST00000529856 EIF2S2P20042 333 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-216ENST00000529856 DZIP3Q86Y13 1208 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-216ENST00000529856 NGEFQ8N5V2 710 aa16.49■□□□□ 0.23
CCDC90B-216ENST00000529856 HOXB7P09629 217 aa16.48■□□□□ 0.23
CCDC90B-216ENST00000529856 DDR1Q08345 913 aa16.48■□□□□ 0.23
CCDC90B-216ENST00000529856 NFIXQ14938 502 aa16.48■□□□□ 0.23
CCDC90B-216ENST00000529856 NLGN2Q8NFZ4 835 aa16.48■□□□□ 0.23
CCDC90B-216ENST00000529856 SALL2Q9Y467 1007 aaPredicted RBP16.48■□□□□ 0.23
CCDC90B-216ENST00000529856 POLRMTO00411 1230 aaKnown RBP16.47■□□□□ 0.23
CCDC90B-216ENST00000529856 MYL6BP14649 208 aa16.47■□□□□ 0.23
CCDC90B-216ENST00000529856 PDIA6Q15084 440 aa16.47■□□□□ 0.23
CCDC90B-216ENST00000529856 WDR63Q8IWG1 891 aa16.47■□□□□ 0.23
CCDC90B-216ENST00000529856 MIER1Q8N108 512 aa16.47■□□□□ 0.23
CCDC90B-216ENST00000529856 IL16Q14005 1332 aa16.46■□□□□ 0.23
CCDC90B-216ENST00000529856 DUSP27Q5VZP5 1158 aa16.46■□□□□ 0.23
CCDC90B-216ENST00000529856 TBC1D9BQ66K14 1250 aa16.46■□□□□ 0.23
CCDC90B-216ENST00000529856 CLEC4GQ6UXB4 293 aa16.46■□□□□ 0.23
CCDC90B-216ENST00000529856 RGL2O15211 777 aa16.45■□□□□ 0.22
CCDC90B-216ENST00000529856 LRP10Q7Z4F1 713 aa16.45■□□□□ 0.22
CCDC90B-216ENST00000529856 NECTIN2Q92692 538 aa16.45■□□□□ 0.22
CCDC90B-216ENST00000529856 SCN7AQ01118 1682 aa16.45■□□□□ 0.22
CCDC90B-216ENST00000529856 BCORQ6W2J9 1755 aa16.44■□□□□ 0.22
CCDC90B-216ENST00000529856 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
CCDC90B-216ENST00000529856 PROSER3Q2NL68 480 aa16.44■□□□□ 0.22
CCDC90B-216ENST00000529856 BICDL1Q6ZP65 573 aa16.44■□□□□ 0.22
CCDC90B-216ENST00000529856 TSR2Q969E8 191 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-216ENST00000529856 DDX21Q9NR30 783 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCDC90B-216ENST00000529856 KIF13BQ9NQT8 1826 aa16.44■□□□□ 0.22
CCDC90B-216ENST00000529856 ERVV-1B6SEH8 477 aa16.43■□□□□ 0.22
CCDC90B-216ENST00000529856 SERPINB2P05120 415 aa16.43■□□□□ 0.22
CCDC90B-216ENST00000529856 HDGFL1Q5TGJ6 251 aa16.43■□□□□ 0.22
CCDC90B-216ENST00000529856 TTLL7Q6ZT98 887 aa16.43■□□□□ 0.22
CCDC90B-216ENST00000529856 C8orf58Q8NAV2 365 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms