RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 SEPT12Q8IYM1 358 aa29.23■■■□□ 2.27
LTBP3-212ENST00000529189 PIGBQ92521 554 aa29.22■■■□□ 2.27
LTBP3-212ENST00000529189 SYTL4Q96C24 671 aaPredicted RBP29.22■■■□□ 2.27
LTBP3-212ENST00000529189 STK31Q9BXU1 1019 aa29.22■■■□□ 2.27
LTBP3-212ENST00000529189 HEG1Q9ULI3 1381 aa29.22■■■□□ 2.27
LTBP3-212ENST00000529189 BCL9O00512 1426 aa29.22■■■□□ 2.27
LTBP3-212ENST00000529189 UBR2Q8IWV8 1755 aa29.21■■■□□ 2.27
LTBP3-212ENST00000529189 PRIM1P49642 420 aaKnown RBP29.21■■■□□ 2.27
LTBP3-212ENST00000529189 FAM161AQ3B820 660 aa29.21■■■□□ 2.27
LTBP3-212ENST00000529189 CCDC30Q5VVM6 783 aa29.21■■■□□ 2.27
LTBP3-212ENST00000529189 ZNF496Q96IT1 587 aaPredicted RBP29.21■■■□□ 2.27
LTBP3-212ENST00000529189 ACSBG1Q96GR2 724 aa29.21■■■□□ 2.27
LTBP3-212ENST00000529189 C5P01031 1676 aa29.2■■■□□ 2.26
LTBP3-212ENST00000529189 NECTIN2Q92692 538 aa29.19■■■□□ 2.26
LTBP3-212ENST00000529189 KCPQ6ZWJ8 1503 aa29.19■■■□□ 2.26
LTBP3-212ENST00000529189 GIGYF1O75420 1035 aaPredicted RBP29.19■■■□□ 2.26
LTBP3-212ENST00000529189 HOXB7P09629 217 aa29.19■■■□□ 2.26
LTBP3-212ENST00000529189 PRAMEF22A3QJZ6 481 aa29.18■■■□□ 2.26
LTBP3-212ENST00000529189 ANP32AP39687 249 aaKnown RBP29.17■■■□□ 2.26
LTBP3-212ENST00000529189 RBM6P78332 1123 aaKnown RBP29.17■■■□□ 2.26
LTBP3-212ENST00000529189 HDGFL1Q5TGJ6 251 aa29.17■■■□□ 2.26
LTBP3-212ENST00000529189 SMC5Q8IY18 1101 aa29.17■■■□□ 2.26
LTBP3-212ENST00000529189 FMNL2Q96PY5 1086 aa29.17■■■□□ 2.26
LTBP3-212ENST00000529189 FAM182BQ5T319 152 aa29.16■■■□□ 2.26
LTBP3-212ENST00000529189 ASAP1Q9ULH1 1129 aa29.16■■■□□ 2.26
LTBP3-212ENST00000529189 EIF2S2P20042 333 aaKnown RBP29.15■■■□□ 2.26
LTBP3-212ENST00000529189 C8orf34Q49A92 452 aa29.15■■■□□ 2.26
LTBP3-212ENST00000529189 G2E3Q7L622 706 aa29.15■■■□□ 2.26
LTBP3-212ENST00000529189 RGS17Q9UGC6 210 aaPredicted RBP29.15■■■□□ 2.26
LTBP3-212ENST00000529189 BRWD3Q6RI45 1802 aa29.14■■■□□ 2.26
LTBP3-212ENST00000529189 C1orf115Q9H7X2 142 aa29.14■■■□□ 2.26
LTBP3-212ENST00000529189 ATG3Q9NT62 314 aa29.14■■■□□ 2.26
LTBP3-212ENST00000529189 PTCD1O75127 700 aaKnown RBP29.13■■■□□ 2.25
LTBP3-212ENST00000529189 KCNQ2O43526 872 aa29.12■■■□□ 2.25
LTBP3-212ENST00000529189 SNRPA1P09661 255 aaKnown RBP29.12■■■□□ 2.25
LTBP3-212ENST00000529189 BCL11AQ9H165 835 aa29.12■■■□□ 2.25
LTBP3-212ENST00000529189 CHMP4AQ9BY43 222 aa29.11■■■□□ 2.25
LTBP3-212ENST00000529189 LAMB4A4D0S4 1761 aa29.1■■■□□ 2.25
LTBP3-212ENST00000529189 FLIIQ13045 1269 aa29.1■■■□□ 2.25
LTBP3-212ENST00000529189 N4BP2Q86UW6 1770 aaPredicted RBP29.1■■■□□ 2.25
LTBP3-212ENST00000529189 CCT4P50991 539 aaKnown RBP29.09■■■□□ 2.25
LTBP3-212ENST00000529189 RXRBP28702 533 aa29.08■■■□□ 2.25
LTBP3-212ENST00000529189 CHPF2Q9P2E5 772 aa29.08■■■□□ 2.25
LTBP3-212ENST00000529189 NHSQ6T4R5 1651 aa29.08■■■□□ 2.25
LTBP3-212ENST00000529189 GCC1Q96CN9 775 aa29.07■■■□□ 2.24
LTBP3-212ENST00000529189 POTEAQ6S8J7 498 aa29.06■■■□□ 2.24
LTBP3-212ENST00000529189 F6X3S4 739 aa29.06■■■□□ 2.24
LTBP3-212ENST00000529189 NUCB1Q02818 461 aa29.06■■■□□ 2.24
LTBP3-212ENST00000529189 FKBP5Q13451 457 aaPredicted RBP29.06■■■□□ 2.24
LTBP3-212ENST00000529189 KRT27Q7Z3Y8 459 aa29.06■■■□□ 2.24
LTBP3-212ENST00000529189 NPM2Q86SE8 214 aaKnown RBP29.06■■■□□ 2.24
LTBP3-212ENST00000529189 USP16Q9Y5T5 823 aa29.06■■■□□ 2.24
LTBP3-212ENST00000529189 SLC4A10Q6U841 1118 aa29.05■■■□□ 2.24
LTBP3-212ENST00000529189 SIRT2Q8IXJ6 389 aa29.05■■■□□ 2.24
LTBP3-212ENST00000529189 RBM42Q9BTD8 480 aaKnown RBP29.05■■■□□ 2.24
LTBP3-212ENST00000529189 SBF2Q86WG5 1849 aa29.05■■■□□ 2.24
LTBP3-212ENST00000529189 PTF1AQ7RTS3 328 aa29.04■■■□□ 2.24
LTBP3-212ENST00000529189 PXDNLA1KZ92 1463 aa29.04■■■□□ 2.24
LTBP3-212ENST00000529189 ANXA1P04083 346 aa29.04■■■□□ 2.24
LTBP3-212ENST00000529189 ATP10DQ9P241 1426 aa29.03■■■□□ 2.24
LTBP3-212ENST00000529189 IPO9Q96P70 1041 aaKnown RBP29.02■■■□□ 2.24
LTBP3-212ENST00000529189 DBF4Q9UBU7 674 aaPredicted RBP29.02■■■□□ 2.24
LTBP3-212ENST00000529189 PROSER3Q2NL68 480 aa29.02■■■□□ 2.24
LTBP3-212ENST00000529189 MEIS3Q99687 375 aa29.02■■■□□ 2.24
LTBP3-212ENST00000529189 BTAF1O14981 1849 aa29.02■■■□□ 2.24
LTBP3-212ENST00000529189 PHAXQ9H814 394 aaKnown RBP29.01■■■□□ 2.23
LTBP3-212ENST00000529189 PALLDQ8WX93 1383 aa29■■■□□ 2.23
LTBP3-212ENST00000529189 ILDR1Q86SU0 546 aaPredicted RBP29■■■□□ 2.23
LTBP3-212ENST00000529189 CHD1LQ86WJ1 897 aa29■■■□□ 2.23
LTBP3-212ENST00000529189 RPAP2Q8IXW5 612 aaPredicted RBP29■■■□□ 2.23
LTBP3-212ENST00000529189 VSIG10Q8N0Z9 540 aa29■■■□□ 2.23
LTBP3-212ENST00000529189 ANKRD44Q8N8A2 993 aa29■■■□□ 2.23
LTBP3-212ENST00000529189 SLC4A9Q96Q91 983 aa29■■■□□ 2.23
LTBP3-212ENST00000529189 PDIA6Q15084 440 aa28.99■■■□□ 2.23
LTBP3-212ENST00000529189 TJP1Q07157 1748 aa28.98■■■□□ 2.23
LTBP3-212ENST00000529189 DNAJC10Q8IXB1 793 aa28.98■■■□□ 2.23
LTBP3-212ENST00000529189 DDX21Q9NR30 783 aaKnown RBP eCLIP28.98■■■□□ 2.23
LTBP3-212ENST00000529189 EP400Q96L91 3159 aa28.98■■■□□ 2.23
LTBP3-212ENST00000529189 PIP4K2AP48426 406 aaPredicted RBP28.97■■■□□ 2.23
LTBP3-212ENST00000529189 CEP85Q6P2H3 762 aa28.97■■■□□ 2.23
LTBP3-212ENST00000529189 SMARCC1Q92922 1105 aaPredicted RBP28.97■■■□□ 2.23
LTBP3-212ENST00000529189 FAM196AQ6ZSG2 479 aa28.96■■■□□ 2.23
LTBP3-212ENST00000529189 LNPKQ9C0E8 428 aa28.96■■■□□ 2.23
LTBP3-212ENST00000529189 MYL6BP14649 208 aa28.95■■■□□ 2.23
LTBP3-212ENST00000529189 ANKRD45Q5TZF3 282 aa28.95■■■□□ 2.23
LTBP3-212ENST00000529189 HYPKQ9NX55 129 aa28.95■■■□□ 2.22
LTBP3-212ENST00000529189 TEX13AQ9BXU3 409 aaPredicted RBP28.94■■■□□ 2.22
LTBP3-212ENST00000529189 NOP58Q9Y2X3 529 aaKnown RBP28.94■■■□□ 2.22
LTBP3-212ENST00000529189 LOC102724428A0A0B4J2F2 783 aa28.93■■■□□ 2.22
LTBP3-212ENST00000529189 SIK1P57059 783 aa28.93■■■□□ 2.22
LTBP3-212ENST00000529189 DCTPP1Q9H773 170 aa28.93■■■□□ 2.22
LTBP3-212ENST00000529189 A1BGP04217 495 aa28.93■■■□□ 2.22
LTBP3-212ENST00000529189 ERBB4Q15303 1308 aa28.92■■■□□ 2.22
LTBP3-212ENST00000529189 NBPF26B4DH59 902 aa28.92■■■□□ 2.22
LTBP3-212ENST00000529189 GNAI3P08754 354 aa28.92■■■□□ 2.22
LTBP3-212ENST00000529189 NBPF14Q5TI25 921 aa28.92■■■□□ 2.22
LTBP3-212ENST00000529189 NBPF10Q6P3W6 841 aaKnown RBP28.92■■■□□ 2.22
LTBP3-212ENST00000529189 NBPF15Q8N660 670 aa28.92■■■□□ 2.22
LTBP3-212ENST00000529189 ERICH6Q7L0X2 663 aa28.91■■■□□ 2.22
LTBP3-212ENST00000529189 LRP10Q7Z4F1 713 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms