RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 CCDC146Q8IYE0 955 aa22.89■■□□□ 1.25
USP35-202ENST00000528910 TEX13AQ9BXU3 409 aaPredicted RBP22.89■■□□□ 1.25
USP35-202ENST00000528910 USP42Q9H9J4 1324 aaKnown RBP22.88■■□□□ 1.25
USP35-202ENST00000528910 LMOD3Q0VAK6 560 aa22.88■■□□□ 1.25
USP35-202ENST00000528910 THUMPD2Q9BTF0 503 aaKnown RBP22.88■■□□□ 1.25
USP35-202ENST00000528910 ANP32CO43423 234 aa22.87■■□□□ 1.25
USP35-202ENST00000528910 STARD3NLO95772 234 aa22.87■■□□□ 1.25
USP35-202ENST00000528910 RIPK4P57078 832 aa22.87■■□□□ 1.25
USP35-202ENST00000528910 PNISRQ8TF01 805 aaKnown RBP22.87■■□□□ 1.25
USP35-202ENST00000528910 KIAA1551Q9HCM1 1747 aa22.87■■□□□ 1.25
USP35-202ENST00000528910 GYS1P13807 737 aa22.86■■□□□ 1.25
USP35-202ENST00000528910 RFC4P35249 363 aa22.86■■□□□ 1.25
USP35-202ENST00000528910 CCDC184Q52MB2 194 aa22.86■■□□□ 1.25
USP35-202ENST00000528910 NLGN1Q8N2Q7 840 aa22.84■■□□□ 1.25
USP35-202ENST00000528910 NRXN2Q9P2S2 1712 aa22.84■■□□□ 1.25
USP35-202ENST00000528910 RRP7AQ9Y3A4 280 aaKnown RBP22.83■■□□□ 1.25
USP35-202ENST00000528910 SNRPA1P09661 255 aaKnown RBP22.82■■□□□ 1.24
USP35-202ENST00000528910 EIF5P55010 431 aaKnown RBP22.82■■□□□ 1.24
USP35-202ENST00000528910 SRP68Q9UHB9 627 aaKnown RBP22.82■■□□□ 1.24
USP35-202ENST00000528910 AFDNP55196 1824 aaKnown RBP22.82■■□□□ 1.24
USP35-202ENST00000528910 C10orf71Q711Q0 1435 aa22.82■■□□□ 1.24
USP35-202ENST00000528910 MMP10P09238 476 aa22.81■■□□□ 1.24
USP35-202ENST00000528910 BABAM1Q9NWV8 329 aa22.81■■□□□ 1.24
USP35-202ENST00000528910 MIS18AQ9NYP9 233 aa22.81■■□□□ 1.24
USP35-202ENST00000528910 TRIM35Q9UPQ4 493 aa22.81■■□□□ 1.24
USP35-202ENST00000528910 PRAMEF22A3QJZ6 481 aa22.8■■□□□ 1.24
USP35-202ENST00000528910 CANXP27824 592 aaKnown RBP22.8■■□□□ 1.24
USP35-202ENST00000528910 IL6STP40189 918 aaPredicted RBP22.8■■□□□ 1.24
USP35-202ENST00000528910 NARFQ9UHQ1 456 aa22.8■■□□□ 1.24
USP35-202ENST00000528910 CD2APQ9Y5K6 639 aa22.8■■□□□ 1.24
USP35-202ENST00000528910 BRCA1P38398 1863 aaKnown RBP22.79■■□□□ 1.24
USP35-202ENST00000528910 EIF4A1P60842 406 aaKnown RBP22.79■■□□□ 1.24
USP35-202ENST00000528910 KLHL34Q8N239 644 aa22.79■■□□□ 1.24
USP35-202ENST00000528910 NLGN2Q8NFZ4 835 aa22.79■■□□□ 1.24
USP35-202ENST00000528910 USP16Q9Y5T5 823 aa22.79■■□□□ 1.24
USP35-202ENST00000528910 FKBP8Q14318 412 aa22.78■■□□□ 1.24
USP35-202ENST00000528910 MRS2Q9HD23 443 aa22.78■■□□□ 1.24
USP35-202ENST00000528910 A0A087WZG4 1122 aa22.77■■□□□ 1.24
USP35-202ENST00000528910 A1BGP04217 495 aa22.77■■□□□ 1.24
USP35-202ENST00000528910 NEUROD2Q15784 382 aa22.77■■□□□ 1.24
USP35-202ENST00000528910 USPL1Q5W0Q7 1092 aa22.77■■□□□ 1.24
USP35-202ENST00000528910 CHD4Q14839 1912 aa22.76■■□□□ 1.23
USP35-202ENST00000528910 ZPR1O75312 459 aa22.76■■□□□ 1.23
USP35-202ENST00000528910 GIGYF1O75420 1035 aaPredicted RBP22.76■■□□□ 1.23
USP35-202ENST00000528910 TSPYL4Q9UJ04 414 aa22.76■■□□□ 1.23
USP35-202ENST00000528910 N4BP2Q86UW6 1770 aaPredicted RBP22.76■■□□□ 1.23
USP35-202ENST00000528910 APAF1O14727 1248 aa22.75■■□□□ 1.23
USP35-202ENST00000528910 BCL2L12Q9HB09 334 aa22.75■■□□□ 1.23
USP35-202ENST00000528910 PXDNLA1KZ92 1463 aa22.74■■□□□ 1.23
USP35-202ENST00000528910 DDR1Q08345 913 aa22.74■■□□□ 1.23
USP35-202ENST00000528910 PARP3Q9Y6F1 533 aa22.73■■□□□ 1.23
USP35-202ENST00000528910 DLEC1Q9Y238 1755 aa22.73■■□□□ 1.23
USP35-202ENST00000528910 DCAF8L1A6NGE4 600 aa22.72■■□□□ 1.23
USP35-202ENST00000528910 NBPF26B4DH59 902 aa22.72■■□□□ 1.23
USP35-202ENST00000528910 CHL1O00533 1208 aa22.72■■□□□ 1.23
USP35-202ENST00000528910 TM4SF1P30408 202 aa22.72■■□□□ 1.23
USP35-202ENST00000528910 NBPF10Q6P3W6 841 aaKnown RBP22.72■■□□□ 1.23
USP35-202ENST00000528910 NBPF15Q8N660 670 aa22.72■■□□□ 1.23
USP35-202ENST00000528910 POLRMTO00411 1230 aaKnown RBP22.71■■□□□ 1.23
USP35-202ENST00000528910 PIP4K2AP48426 406 aaPredicted RBP22.7■■□□□ 1.22
USP35-202ENST00000528910 NFIXQ14938 502 aa22.7■■□□□ 1.22
USP35-202ENST00000528910 ZNF330Q9Y3S2 320 aaPredicted RBP22.7■■□□□ 1.22
USP35-202ENST00000528910 ERBB4Q15303 1308 aa22.7■■□□□ 1.22
USP35-202ENST00000528910 NUP98P52948 1817 aa22.7■■□□□ 1.22
USP35-202ENST00000528910 ANKRD31Q8N7Z5 1873 aa22.7■■□□□ 1.22
USP35-202ENST00000528910 CAMTA2O94983 1202 aa22.69■■□□□ 1.22
USP35-202ENST00000528910 RGL2O15211 777 aa22.68■■□□□ 1.22
USP35-202ENST00000528910 CFAP44Q96MT7 982 aa22.68■■□□□ 1.22
USP35-202ENST00000528910 TBC1D2BQ9UPU7 963 aa22.68■■□□□ 1.22
USP35-202ENST00000528910 ARFGEF1Q9Y6D6 1849 aa22.68■■□□□ 1.22
USP35-202ENST00000528910 ZNF853P0CG23 659 aa22.67■■□□□ 1.22
USP35-202ENST00000528910 NPM2Q86SE8 214 aaKnown RBP22.67■■□□□ 1.22
USP35-202ENST00000528910 DZIP3Q86Y13 1208 aaKnown RBP22.67■■□□□ 1.22
USP35-202ENST00000528910 CALD1Q05682 793 aaKnown RBP22.66■■□□□ 1.22
USP35-202ENST00000528910 CCDC27Q2M243 656 aa22.66■■□□□ 1.22
USP35-202ENST00000528910 NCBP3Q53F19 620 aaKnown RBP22.66■■□□□ 1.22
USP35-202ENST00000528910 TGFB2P61812 414 aa22.65■■□□□ 1.22
USP35-202ENST00000528910 IFT57Q9NWB7 429 aa22.65■■□□□ 1.22
USP35-202ENST00000528910 ANKRD36CQ5JPF3 1778 aa22.65■■□□□ 1.22
USP35-202ENST00000528910 CARMIL3Q8ND23 1372 aa22.64■■□□□ 1.22
USP35-202ENST00000528910 TBC1D9BQ66K14 1250 aa22.64■■□□□ 1.21
USP35-202ENST00000528910 COL11A2P13942 1736 aaPredicted RBP22.64■■□□□ 1.21
USP35-202ENST00000528910 YBX3P16989 372 aaKnown RBP eCLIP22.63■■□□□ 1.21
USP35-202ENST00000528910 GPR162Q16538 588 aa22.63■■□□□ 1.21
USP35-202ENST00000528910 MBIPQ9NS73 344 aa22.63■■□□□ 1.21
USP35-202ENST00000528910 HOXB7P09629 217 aa22.62■■□□□ 1.21
USP35-202ENST00000528910 CLEC4GQ6UXB4 293 aa22.62■■□□□ 1.21
USP35-202ENST00000528910 LRP10Q7Z4F1 713 aa22.62■■□□□ 1.21
USP35-202ENST00000528910 LAS1LQ9Y4W2 734 aaKnown RBP22.62■■□□□ 1.21
USP35-202ENST00000528910 SERPINB2P05120 415 aa22.61■■□□□ 1.21
USP35-202ENST00000528910 GNAI1P63096 354 aa22.61■■□□□ 1.21
USP35-202ENST00000528910 KRT24Q2M2I5 525 aa22.61■■□□□ 1.21
USP35-202ENST00000528910 ZNF652Q9Y2D9 606 aa22.61■■□□□ 1.21
USP35-202ENST00000528910 UTRNP46939 3433 aa22.61■■□□□ 1.21
USP35-202ENST00000528910 ATP10DQ9P241 1426 aa22.6■■□□□ 1.21
USP35-202ENST00000528910 PDIA6Q15084 440 aa22.6■■□□□ 1.21
USP35-202ENST00000528910 GOLGB1Q14789 3259 aaKnown RBP22.6■■□□□ 1.21
USP35-202ENST00000528910 YY1P25490 414 aa22.59■■□□□ 1.21
USP35-202ENST00000528910 BICDL1Q6ZP65 573 aa22.59■■□□□ 1.21
USP35-202ENST00000528910 WWC1Q8IX03 1113 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms