RNA–Protein interactions for RNA: ENST00000528281.5

CNKSR1-212, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-212ENST00000528281 C10orf71Q711Q0 1435 aa23.67■■□□□ 1.38
CNKSR1-212ENST00000528281 COL15A1P39059 1388 aa23.67■■□□□ 1.38
CNKSR1-212ENST00000528281 FKBP8Q14318 412 aa23.67■■□□□ 1.38
CNKSR1-212ENST00000528281 ZNF784Q8NCA9 323 aaPredicted RBP23.67■■□□□ 1.38
CNKSR1-212ENST00000528281 KIAA1551Q9HCM1 1747 aa23.67■■□□□ 1.38
CNKSR1-212ENST00000528281 TGFB2P61812 414 aa23.66■■□□□ 1.38
CNKSR1-212ENST00000528281 MCM10Q7L590 875 aa23.66■■□□□ 1.38
CNKSR1-212ENST00000528281 DLG5Q8TDM6 1919 aa23.65■■□□□ 1.38
CNKSR1-212ENST00000528281 USPL1Q5W0Q7 1092 aa23.65■■□□□ 1.38
CNKSR1-212ENST00000528281 NARFQ9UHQ1 456 aa23.65■■□□□ 1.38
CNKSR1-212ENST00000528281 N4BP2Q86UW6 1770 aaPredicted RBP23.65■■□□□ 1.38
CNKSR1-212ENST00000528281 PXDNLA1KZ92 1463 aa23.64■■□□□ 1.38
CNKSR1-212ENST00000528281 CANXP27824 592 aaKnown RBP23.64■■□□□ 1.37
CNKSR1-212ENST00000528281 PLEKHF1Q96S99 279 aa23.64■■□□□ 1.37
CNKSR1-212ENST00000528281 PNNQ9H307 717 aaKnown RBP23.64■■□□□ 1.37
CNKSR1-212ENST00000528281 TM4SF1P30408 202 aa23.63■■□□□ 1.37
CNKSR1-212ENST00000528281 KCNQ3O43525 872 aa23.62■■□□□ 1.37
CNKSR1-212ENST00000528281 EIF5P55010 431 aaKnown RBP23.62■■□□□ 1.37
CNKSR1-212ENST00000528281 DDR1Q08345 913 aa23.62■■□□□ 1.37
CNKSR1-212ENST00000528281 DCTN1Q14203 1278 aa23.62■■□□□ 1.37
CNKSR1-212ENST00000528281 A0A087WZG4 1122 aa23.61■■□□□ 1.37
CNKSR1-212ENST00000528281 POLRMTO00411 1230 aaKnown RBP23.6■■□□□ 1.37
CNKSR1-212ENST00000528281 WWC3Q9ULE0 1092 aa23.6■■□□□ 1.37
CNKSR1-212ENST00000528281 BRCA1P38398 1863 aaKnown RBP23.59■■□□□ 1.37
CNKSR1-212ENST00000528281 MYBBP1AQ9BQG0 1328 aaKnown RBP23.59■■□□□ 1.37
CNKSR1-212ENST00000528281 A0A0G2JLW4 131 aa23.58■■□□□ 1.37
CNKSR1-212ENST00000528281 IL6STP40189 918 aaPredicted RBP23.58■■□□□ 1.37
CNKSR1-212ENST00000528281 TAF7Q15545 349 aaPredicted RBP23.58■■□□□ 1.37
CNKSR1-212ENST00000528281 NFE2L2Q16236 605 aa23.58■■□□□ 1.37
CNKSR1-212ENST00000528281 BCL2L12Q9HB09 334 aa23.58■■□□□ 1.37
CNKSR1-212ENST00000528281 MAPK8IP3Q9UPT6 1336 aa23.58■■□□□ 1.36
CNKSR1-212ENST00000528281 AFDNP55196 1824 aaKnown RBP23.57■■□□□ 1.36
CNKSR1-212ENST00000528281 DPEP1P16444 411 aa23.57■■□□□ 1.36
CNKSR1-212ENST00000528281 NFIXQ14938 502 aa23.57■■□□□ 1.36
CNKSR1-212ENST00000528281 NRXN2Q9P2S2 1712 aa23.56■■□□□ 1.36
CNKSR1-212ENST00000528281 A1BGP04217 495 aa23.56■■□□□ 1.36
CNKSR1-212ENST00000528281 SNRPA1P09661 255 aaKnown RBP23.56■■□□□ 1.36
CNKSR1-212ENST00000528281 SCN7AQ01118 1682 aa23.55■■□□□ 1.36
CNKSR1-212ENST00000528281 USP16Q9Y5T5 823 aa23.55■■□□□ 1.36
CNKSR1-212ENST00000528281 NPM2Q86SE8 214 aaKnown RBP23.54■■□□□ 1.36
CNKSR1-212ENST00000528281 PNISRQ8TF01 805 aaKnown RBP23.54■■□□□ 1.36
CNKSR1-212ENST00000528281 ZNF330Q9Y3S2 320 aaPredicted RBP23.54■■□□□ 1.36
CNKSR1-212ENST00000528281 KDM3BQ7LBC6 1761 aa23.53■■□□□ 1.36
CNKSR1-212ENST00000528281 KCNA3P22001 575 aa23.53■■□□□ 1.36
CNKSR1-212ENST00000528281 BCS1LQ9Y276 419 aa23.53■■□□□ 1.36
CNKSR1-212ENST00000528281 PRAMEF22A3QJZ6 481 aa23.52■■□□□ 1.36
CNKSR1-212ENST00000528281 TBC1D2BQ9UPU7 963 aa23.52■■□□□ 1.36
CNKSR1-212ENST00000528281 ARFGEF1Q9Y6D6 1849 aa23.52■■□□□ 1.36
CNKSR1-212ENST00000528281 SERPINB2P05120 415 aa23.51■■□□□ 1.35
CNKSR1-212ENST00000528281 MIS18AQ9NYP9 233 aa23.51■■□□□ 1.35
CNKSR1-212ENST00000528281 PIM2Q9P1W9 311 aa23.51■■□□□ 1.35
CNKSR1-212ENST00000528281 ZEB1P37275 1124 aaPredicted RBP23.5■■□□□ 1.35
CNKSR1-212ENST00000528281 LAMB4A4D0S4 1761 aa23.5■■□□□ 1.35
CNKSR1-212ENST00000528281 BCORQ6W2J9 1755 aa23.5■■□□□ 1.35
CNKSR1-212ENST00000528281 TBC1D9BQ66K14 1250 aa23.48■■□□□ 1.35
CNKSR1-212ENST00000528281 BICDL1Q6ZP65 573 aa23.48■■□□□ 1.35
CNKSR1-212ENST00000528281 THUMPD2Q9BTF0 503 aaKnown RBP23.48■■□□□ 1.35
CNKSR1-212ENST00000528281 ADCY9O60503 1353 aa23.48■■□□□ 1.35
CNKSR1-212ENST00000528281 CAMTA2O94983 1202 aa23.47■■□□□ 1.35
CNKSR1-212ENST00000528281 CHRNA5P30532 468 aa23.47■■□□□ 1.35
CNKSR1-212ENST00000528281 DZIP3Q86Y13 1208 aaKnown RBP23.47■■□□□ 1.35
CNKSR1-212ENST00000528281 PRKRIP1Q9H875 184 aaPredicted RBP23.47■■□□□ 1.35
CNKSR1-212ENST00000528281 ATP10DQ9P241 1426 aa23.47■■□□□ 1.35
CNKSR1-212ENST00000528281 PIP4K2AP48426 406 aaPredicted RBP23.46■■□□□ 1.35
CNKSR1-212ENST00000528281 RIPK4P57078 832 aa23.46■■□□□ 1.35
CNKSR1-212ENST00000528281 DALRD3Q5D0E6 543 aaKnown RBP23.46■■□□□ 1.35
CNKSR1-212ENST00000528281 DLEC1Q9Y238 1755 aa23.45■■□□□ 1.34
CNKSR1-212ENST00000528281 CARMIL3Q8ND23 1372 aa23.45■■□□□ 1.34
CNKSR1-212ENST00000528281 TMPOP42166 694 aaKnown RBP23.45■■□□□ 1.34
CNKSR1-212ENST00000528281 NBPF26B4DH59 902 aa23.44■■□□□ 1.34
CNKSR1-212ENST00000528281 GIGYF1O75420 1035 aaPredicted RBP23.44■■□□□ 1.34
CNKSR1-212ENST00000528281 EIF4A1P60842 406 aaKnown RBP23.44■■□□□ 1.34
CNKSR1-212ENST00000528281 LMOD3Q0VAK6 560 aa23.44■■□□□ 1.34
CNKSR1-212ENST00000528281 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
CNKSR1-212ENST00000528281 NBPF10Q6P3W6 841 aaKnown RBP23.44■■□□□ 1.34
CNKSR1-212ENST00000528281 ARHGAP27Q6ZUM4 889 aa23.44■■□□□ 1.34
CNKSR1-212ENST00000528281 NBPF15Q8N660 670 aa23.44■■□□□ 1.34
CNKSR1-212ENST00000528281 CLEC4GQ6UXB4 293 aa23.43■■□□□ 1.34
CNKSR1-212ENST00000528281 SETDB2Q96T68 719 aa23.43■■□□□ 1.34
CNKSR1-212ENST00000528281 ANKRD31Q8N7Z5 1873 aa23.41■■□□□ 1.34
CNKSR1-212ENST00000528281 RGL2O15211 777 aa23.41■■□□□ 1.34
CNKSR1-212ENST00000528281 RUNDC1Q96C34 613 aa23.41■■□□□ 1.34
CNKSR1-212ENST00000528281 ZNF652Q9Y2D9 606 aa23.41■■□□□ 1.34
CNKSR1-212ENST00000528281 CCDC146Q8IYE0 955 aa23.4■■□□□ 1.34
CNKSR1-212ENST00000528281 BABAM1Q9NWV8 329 aa23.4■■□□□ 1.34
CNKSR1-212ENST00000528281 TSPYL4Q9UJ04 414 aa23.4■■□□□ 1.34
CNKSR1-212ENST00000528281 PDZRN3Q9UPQ7 1066 aa23.4■■□□□ 1.34
CNKSR1-212ENST00000528281 H0YIN7 160 aa23.39■■□□□ 1.33
CNKSR1-212ENST00000528281 PRR5LQ6MZQ0 368 aa23.39■■□□□ 1.33
CNKSR1-212ENST00000528281 C2CD5Q86YS7 1000 aa23.39■■□□□ 1.33
CNKSR1-212ENST00000528281 BRIP1Q9BX63 1249 aa23.39■■□□□ 1.33
CNKSR1-212ENST00000528281 GPBP1L1Q9HC44 474 aaPredicted RBP23.39■■□□□ 1.33
CNKSR1-212ENST00000528281 ADAMTS8Q9UP79 889 aa23.39■■□□□ 1.33
CNKSR1-212ENST00000528281 PDE6BP35913 854 aa23.38■■□□□ 1.33
CNKSR1-212ENST00000528281 C1QTNF8P60827 252 aa23.38■■□□□ 1.33
CNKSR1-212ENST00000528281 CNBD1Q8NA66 436 aa23.38■■□□□ 1.33
CNKSR1-212ENST00000528281 TTLL6Q8N841 843 aa23.37■■□□□ 1.33
CNKSR1-212ENST00000528281 RRP7AQ9Y3A4 280 aaKnown RBP23.37■■□□□ 1.33
CNKSR1-212ENST00000528281 NPHP1O15259 732 aa23.36■■□□□ 1.33
CNKSR1-212ENST00000528281 NEUROD2Q15784 382 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms