RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 LARP1Q6PKG0 1096 aaKnown RBP21.44■■□□□ 1.02
PCDHA6-202ENST00000527624 MAP3K2Q9Y2U5 619 aa21.44■■□□□ 1.02
PCDHA6-202ENST00000527624 ABCA3Q99758 1704 aa21.44■■□□□ 1.02
PCDHA6-202ENST00000527624 HSP90AB1P08238 724 aaKnown RBP21.44■■□□□ 1.02
PCDHA6-202ENST00000527624 CABP4P57796 275 aa21.44■■□□□ 1.02
PCDHA6-202ENST00000527624 NHSL1Q5SYE7 1610 aa21.43■■□□□ 1.02
PCDHA6-202ENST00000527624 TTC5Q8N0Z6 440 aa21.43■■□□□ 1.02
PCDHA6-202ENST00000527624 ZCRB1Q8TBF4 217 aaKnown RBP21.43■■□□□ 1.02
PCDHA6-202ENST00000527624 HYPKQ9NX55 129 aa21.43■■□□□ 1.02
PCDHA6-202ENST00000527624 EVA1CP58658 441 aa21.43■■□□□ 1.02
PCDHA6-202ENST00000527624 AIMP1Q12904 312 aaKnown RBP21.43■■□□□ 1.02
PCDHA6-202ENST00000527624 TTC22Q5TAA0 569 aa21.43■■□□□ 1.02
PCDHA6-202ENST00000527624 TBC1D9Q6ZT07 1266 aa21.43■■□□□ 1.02
PCDHA6-202ENST00000527624 DDX21Q9NR30 783 aaKnown RBP eCLIP21.43■■□□□ 1.02
PCDHA6-202ENST00000527624 PDIA6Q15084 440 aa21.42■■□□□ 1.02
PCDHA6-202ENST00000527624 MRC1P22897 1456 aa21.42■■□□□ 1.02
PCDHA6-202ENST00000527624 KSR2Q6VAB6 950 aa21.41■■□□□ 1.02
PCDHA6-202ENST00000527624 PCDH11XQ9BZA7 1347 aa21.41■■□□□ 1.02
PCDHA6-202ENST00000527624 PCDH11YQ9BZA8 1340 aa21.41■■□□□ 1.02
PCDHA6-202ENST00000527624 MYL6BP14649 208 aa21.41■■□□□ 1.02
PCDHA6-202ENST00000527624 CARD10Q9BWT7 1032 aa21.41■■□□□ 1.02
PCDHA6-202ENST00000527624 BECN1Q14457 450 aa21.4■■□□□ 1.02
PCDHA6-202ENST00000527624 IL2RBP14784 551 aa21.4■■□□□ 1.02
PCDHA6-202ENST00000527624 PPP1R42Q7Z4L9 355 aa21.39■■□□□ 1.01
PCDHA6-202ENST00000527624 DDX54Q8TDD1 881 aaKnown RBP21.39■■□□□ 1.01
PCDHA6-202ENST00000527624 C5P01031 1676 aa21.39■■□□□ 1.01
PCDHA6-202ENST00000527624 CDC45O75419 566 aa21.39■■□□□ 1.01
PCDHA6-202ENST00000527624 PIP4K2AP48426 406 aaPredicted RBP21.39■■□□□ 1.01
PCDHA6-202ENST00000527624 CWF19L2Q2TBE0 894 aaKnown RBP21.39■■□□□ 1.01
PCDHA6-202ENST00000527624 LRRCC1Q9C099 1032 aa21.39■■□□□ 1.01
PCDHA6-202ENST00000527624 USP16Q9Y5T5 823 aa21.39■■□□□ 1.01
PCDHA6-202ENST00000527624 SNRPA1P09661 255 aaKnown RBP21.38■■□□□ 1.01
PCDHA6-202ENST00000527624 FMNL2Q96PY5 1086 aa21.38■■□□□ 1.01
PCDHA6-202ENST00000527624 IBTKQ9P2D0 1353 aaPredicted RBP21.38■■□□□ 1.01
PCDHA6-202ENST00000527624 PARP4Q9UKK3 1724 aaKnown RBP21.38■■□□□ 1.01
PCDHA6-202ENST00000527624 SSH3Q8TE77 659 aa21.37■■□□□ 1.01
PCDHA6-202ENST00000527624 SRGAP3O43295 1099 aa21.36■■□□□ 1.01
PCDHA6-202ENST00000527624 DDX58O95786 925 aaKnown RBP21.36■■□□□ 1.01
PCDHA6-202ENST00000527624 C9orf78Q9NZ63 289 aaPredicted RBP21.36■■□□□ 1.01
PCDHA6-202ENST00000527624 TSHZ3Q63HK5 1081 aa21.36■■□□□ 1.01
PCDHA6-202ENST00000527624 XAGE3Q8WTP9 111 aa21.36■■□□□ 1.01
PCDHA6-202ENST00000527624 BTG4Q9NY30 223 aa21.36■■□□□ 1.01
PCDHA6-202ENST00000527624 ALDH1L1O75891 902 aa21.35■■□□□ 1.01
PCDHA6-202ENST00000527624 SDSP20132 328 aa21.35■■□□□ 1.01
PCDHA6-202ENST00000527624 PDE1AP54750 535 aa21.35■■□□□ 1.01
PCDHA6-202ENST00000527624 RIC3Q7Z5B4 369 aa21.35■■□□□ 1.01
PCDHA6-202ENST00000527624 SURF6O75683 361 aaKnown RBP21.34■■□□□ 1.01
PCDHA6-202ENST00000527624 POLA2Q14181 598 aa21.34■■□□□ 1.01
PCDHA6-202ENST00000527624 COPS6Q7L5N1 327 aa21.34■■□□□ 1.01
PCDHA6-202ENST00000527624 TBC1D2Q9BYX2 928 aa21.34■■□□□ 1.01
PCDHA6-202ENST00000527624 LINS1Q8NG48 757 aa21.33■■□□□ 1.01
PCDHA6-202ENST00000527624 IL1RAPL2Q9NP60 686 aa21.33■■□□□ 1
PCDHA6-202ENST00000527624 RBM25P49756 843 aaKnown RBP21.32■■□□□ 1
PCDHA6-202ENST00000527624 ROBO1Q9Y6N7 1651 aa21.32■■□□□ 1
PCDHA6-202ENST00000527624 ERVV-2B6SEH9 535 aa21.31■■□□□ 1
PCDHA6-202ENST00000527624 OSBPL3Q9H4L5 887 aa21.31■■□□□ 1
PCDHA6-202ENST00000527624 SALL3Q9BXA9 1300 aa21.31■■□□□ 1
PCDHA6-202ENST00000527624 FRAT2O75474 233 aaPredicted RBP21.31■■□□□ 1
PCDHA6-202ENST00000527624 MX1P20591 662 aa21.31■■□□□ 1
PCDHA6-202ENST00000527624 NKX1-1Q15270 411 aaPredicted RBP21.31■■□□□ 1
PCDHA6-202ENST00000527624 LRP10Q7Z4F1 713 aa21.31■■□□□ 1
PCDHA6-202ENST00000527624 IGKV5-2P06315 115 aa21.3■■□□□ 1
PCDHA6-202ENST00000527624 GRM8O00222 908 aa21.29■■□□□ 1
PCDHA6-202ENST00000527624 PTCD1O75127 700 aaKnown RBP21.28■■□□□ 1
PCDHA6-202ENST00000527624 MYD88Q99836 296 aa21.28■■□□□ 1
PCDHA6-202ENST00000527624 GLI3P10071 1580 aa21.28■■□□□ 1
PCDHA6-202ENST00000527624 RAB11FIP3O75154 756 aa21.28■■□□□ 1
PCDHA6-202ENST00000527624 NEXNQ0ZGT2 675 aa21.28■■□□□ 1
PCDHA6-202ENST00000527624 ANKRD13DQ6ZTN6 518 aa21.28■■□□□ 1
PCDHA6-202ENST00000527624 SUCLG2Q96I99 432 aa21.28■■□□□ 1
PCDHA6-202ENST00000527624 SLKQ9H2G2 1235 aaPredicted RBP21.28■■□□□ 1
PCDHA6-202ENST00000527624 GSE1Q14687 1217 aa21.27■■□□□ 1
PCDHA6-202ENST00000527624 NUTM1Q86Y26 1132 aa21.27■■□□□ 1
PCDHA6-202ENST00000527624 RHPN1Q8TCX5 695 aa21.27■■□□□ 1
PCDHA6-202ENST00000527624 SHANK3Q9BYB0 1731 aa21.27■□□□□ 0.99
PCDHA6-202ENST00000527624 METTL22Q9BUU2 404 aaPredicted RBP21.27■□□□□ 0.99
PCDHA6-202ENST00000527624 ANTXR1Q9H6X2 564 aa21.27■□□□□ 0.99
PCDHA6-202ENST00000527624 NEURL1BA8MQ27 555 aa21.26■□□□□ 0.99
PCDHA6-202ENST00000527624 MTX1Q13505 466 aa21.26■□□□□ 0.99
PCDHA6-202ENST00000527624 CASC1Q6TDU7 716 aa21.25■□□□□ 0.99
PCDHA6-202ENST00000527624 KAZALD1Q96I82 304 aa21.25■□□□□ 0.99
PCDHA6-202ENST00000527624 OS9Q13438 667 aaPredicted RBP21.25■□□□□ 0.99
PCDHA6-202ENST00000527624 SPRYD3Q8NCJ5 442 aa21.25■□□□□ 0.99
PCDHA6-202ENST00000527624 KIF1BPQ96EK5 621 aa21.25■□□□□ 0.99
PCDHA6-202ENST00000527624 KIF2CQ99661 725 aa21.25■□□□□ 0.99
PCDHA6-202ENST00000527624 BICC1Q9H694 974 aaKnown RBP21.25■□□□□ 0.99
PCDHA6-202ENST00000527624 UTYO14607 1347 aa21.25■□□□□ 0.99
PCDHA6-202ENST00000527624 PA2G4Q9UQ80 394 aaKnown RBP21.24■□□□□ 0.99
PCDHA6-202ENST00000527624 HDAC5Q9UQL6 1122 aa21.24■□□□□ 0.99
PCDHA6-202ENST00000527624 AHDC1Q5TGY3 1603 aaPredicted RBP21.24■□□□□ 0.99
PCDHA6-202ENST00000527624 NBPF26B4DH59 902 aa21.24■□□□□ 0.99
PCDHA6-202ENST00000527624 GCKRQ14397 625 aa21.24■□□□□ 0.99
PCDHA6-202ENST00000527624 NBPF14Q5TI25 921 aa21.24■□□□□ 0.99
PCDHA6-202ENST00000527624 NBPF10Q6P3W6 841 aaKnown RBP21.24■□□□□ 0.99
PCDHA6-202ENST00000527624 NBPF15Q8N660 670 aa21.24■□□□□ 0.99
PCDHA6-202ENST00000527624 STAP2Q9UGK3 403 aa21.24■□□□□ 0.99
PCDHA6-202ENST00000527624 LTBP4Q8N2S1 1624 aa21.24■□□□□ 0.99
PCDHA6-202ENST00000527624 KCPQ6ZWJ8 1503 aa21.23■□□□□ 0.99
PCDHA6-202ENST00000527624 A1BGP04217 495 aa21.23■□□□□ 0.99
PCDHA6-202ENST00000527624 JARID2Q92833 1246 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms