RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 GSTTP1A0A1W2PQM5 241 aa8.46□□□□□ -1.06
CTNND1-216ENST00000527467 GRIN3BO60391 1043 aa8.46□□□□□ -1.06
CTNND1-216ENST00000527467 ZSCAN30Q86W11 494 aa8.46□□□□□ -1.06
CTNND1-216ENST00000527467 RPUSD2Q8IZ73 545 aaKnown RBP8.46□□□□□ -1.06
CTNND1-216ENST00000527467 TANGO6Q9C0B7 1094 aa8.46□□□□□ -1.06
CTNND1-216ENST00000527467 GOLGA6L9A6NEM1 432 aa8.46□□□□□ -1.06
CTNND1-216ENST00000527467 ARHGEF40Q8TER5 1519 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 A0A087WZG4 1122 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 POTEB2H3BUK9 544 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 ZPR1O75312 459 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 STK38Q15208 465 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 SPECC1Q5M775 1068 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
CTNND1-216ENST00000527467 SHROOM2Q13796 1616 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 IVLP07476 585 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 HOOK3Q86VS8 718 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 HSPA5P11021 654 aaKnown RBP8.45□□□□□ -1.06
CTNND1-216ENST00000527467 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
CTNND1-216ENST00000527467 CCDC158Q5M9N0 1113 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 DDX54Q8TDD1 881 aaKnown RBP8.45□□□□□ -1.06
CTNND1-216ENST00000527467 TFCP2L1Q9NZI6 479 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 CCDC61Q9Y6R9 512 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 KIF5BP33176 963 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 LMAN1P49257 510 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 KANK4Q5T7N3 995 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-216ENST00000527467 SERPINA10Q9UK55 444 aa8.45□□□□□ -1.06
CTNND1-216ENST00000527467 ZSCAN12O43309 604 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 ARID4AP29374 1257 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-216ENST00000527467 MCM2P49736 904 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 SEPT14Q6ZU15 432 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 KIF18AQ8NI77 898 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 MYO5CQ9NQX4 1742 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 PTPN14Q15678 1187 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 CEP120Q8N960 986 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 NUP133Q8WUM0 1156 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 TNMDQ9H2S6 317 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 CABP2Q9NPB3 220 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 UNC5CLQ8IV45 518 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 ZMAT2Q96NC0 199 aaKnown RBP8.44□□□□□ -1.06
CTNND1-216ENST00000527467 DDX19BQ9UMR2 479 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 ZNF652Q9Y2D9 606 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 SHANK2Q9UPX8 1470 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 ERC2O15083 957 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 CCDC27Q2M243 656 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 SEPT10Q9P0V9 454 aa8.44□□□□□ -1.06
CTNND1-216ENST00000527467 RIMS1Q86UR5 1692 aaKnown RBP8.44□□□□□ -1.06
CTNND1-216ENST00000527467 A0A1B0GUA9 196 aa8.43□□□□□ -1.06
CTNND1-216ENST00000527467 NUTM2GQ5VZR2 741 aa8.43□□□□□ -1.06
CTNND1-216ENST00000527467 RSRC1Q96IZ7 334 aaKnown RBP8.43□□□□□ -1.06
CTNND1-216ENST00000527467 RBM42Q9BTD8 480 aaKnown RBP8.43□□□□□ -1.06
CTNND1-216ENST00000527467 CEP57L1Q8IYX8 460 aa8.43□□□□□ -1.06
CTNND1-216ENST00000527467 EXOC6Q8TAG9 804 aa8.43□□□□□ -1.06
CTNND1-216ENST00000527467 CDK19Q9BWU1 502 aa8.43□□□□□ -1.06
CTNND1-216ENST00000527467 HOMER2Q9NSB8 354 aa8.43□□□□□ -1.06
CTNND1-216ENST00000527467 AGLP35573 1532 aa8.43□□□□□ -1.06
CTNND1-216ENST00000527467 FIBPO43427 364 aa8.43□□□□□ -1.06
CTNND1-216ENST00000527467 RRP1P56182 461 aaKnown RBP8.43□□□□□ -1.06
CTNND1-216ENST00000527467 MSL1Q68DK7 614 aa8.43□□□□□ -1.06
CTNND1-216ENST00000527467 ANAPC4Q9UJX5 808 aa8.43□□□□□ -1.06
CTNND1-216ENST00000527467 GTPBP4Q9BZE4 634 aaKnown RBP8.43□□□□□ -1.06
CTNND1-216ENST00000527467 PLEKHG1Q9ULL1 1385 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 KIF5CO60282 957 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 POTEJP0CG39 1038 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 PARP3Q9Y6F1 533 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 FSD2A1L4K1 749 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 ATP2B1P20020 1258 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 SART3Q15020 963 aaKnown RBP8.42□□□□□ -1.06
CTNND1-216ENST00000527467 ERC1Q8IUD2 1116 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 CEP112Q8N8E3 955 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 CRBNQ96SW2 442 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 TAOK3Q9H2K8 898 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 PAFAH1B1P43034 410 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 NBPF1Q3BBV0 1214 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 GBP6Q6ZN66 633 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 CEP57Q86XR8 500 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 VPS37DQ86XT2 251 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 TCP11L2Q8N4U5 519 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 GOPCQ9HD26 462 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 SMTNL1A8MU46 457 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 TACC1O75410 805 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 CDC45O75419 566 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 G3BP1Q13283 466 aaKnown RBP eCLIP8.42□□□□□ -1.068e-9■□□□□ 11.1
CTNND1-216ENST00000527467 MPNDQ8N594 471 aa8.42□□□□□ -1.06
CTNND1-216ENST00000527467 NSRP1Q9H0G5 558 aaKnown RBP8.42□□□□□ -1.06
CTNND1-216ENST00000527467 CASQ1P31415 396 aa8.41□□□□□ -1.06
CTNND1-216ENST00000527467 KIF4BQ2VIQ3 1234 aa8.41□□□□□ -1.06
CTNND1-216ENST00000527467 TTC31Q49AM3 519 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-216ENST00000527467 RAB3IL1Q8TBN0 382 aa8.41□□□□□ -1.06
CTNND1-216ENST00000527467 TMOD3Q9NYL9 352 aa8.41□□□□□ -1.06
CTNND1-216ENST00000527467 C9orf78Q9NZ63 289 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-216ENST00000527467 URI1O94763 535 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-216ENST00000527467 SPA17Q15506 151 aa8.41□□□□□ -1.06
CTNND1-216ENST00000527467 CCDC83Q8IWF9 413 aa8.41□□□□□ -1.06
CTNND1-216ENST00000527467 ZNF397Q8NF99 534 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-216ENST00000527467 COG6Q9Y2V7 657 aa8.41□□□□□ -1.06
CTNND1-216ENST00000527467 LMOD1P29536 600 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-216ENST00000527467 EIF5P55010 431 aaKnown RBP8.41□□□□□ -1.06
CTNND1-216ENST00000527467 CCDC174Q6PII3 467 aa8.41□□□□□ -1.06
CTNND1-216ENST00000527467 GBP7Q8N8V2 638 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-216ENST00000527467 NUDT16Q96DE0 195 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms