RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-204ENST00000526846 BCORQ6W2J9 1755 aa21.19■□□□□ 0.98
CHD7-204ENST00000526846 TRIM35Q9UPQ4 493 aa21.19■□□□□ 0.98
CHD7-204ENST00000526846 RRP7AQ9Y3A4 280 aaKnown RBP21.19■□□□□ 0.98
CHD7-204ENST00000526846 POLD1P28340 1107 aa21.18■□□□□ 0.98
CHD7-204ENST00000526846 PNISRQ8TF01 805 aaKnown RBP21.18■□□□□ 0.98
CHD7-204ENST00000526846 FHDC1Q9C0D6 1143 aaPredicted RBP21.18■□□□□ 0.98
CHD7-204ENST00000526846 MIS18AQ9NYP9 233 aa21.18■□□□□ 0.98
CHD7-204ENST00000526846 PRAMEF22A3QJZ6 481 aa21.17■□□□□ 0.98
CHD7-204ENST00000526846 TEX13AQ9BXU3 409 aaPredicted RBP21.17■□□□□ 0.98
CHD7-204ENST00000526846 USP42Q9H9J4 1324 aaKnown RBP21.17■□□□□ 0.98
CHD7-204ENST00000526846 COL15A1P39059 1388 aa21.17■□□□□ 0.98
CHD7-204ENST00000526846 KIAA1551Q9HCM1 1747 aa21.16■□□□□ 0.98
CHD7-204ENST00000526846 GYS1P13807 737 aa21.16■□□□□ 0.98
CHD7-204ENST00000526846 LMOD3Q0VAK6 560 aa21.16■□□□□ 0.98
CHD7-204ENST00000526846 SYT17Q9BSW7 474 aa21.16■□□□□ 0.98
CHD7-204ENST00000526846 STARD3NLO95772 234 aa21.15■□□□□ 0.98
CHD7-204ENST00000526846 USP16Q9Y5T5 823 aa21.15■□□□□ 0.98
CHD7-204ENST00000526846 AFDNP55196 1824 aaKnown RBP21.15■□□□□ 0.98
CHD7-204ENST00000526846 RFC4P35249 363 aa21.14■□□□□ 0.97
CHD7-204ENST00000526846 EIF5P55010 431 aaKnown RBP21.14■□□□□ 0.97
CHD7-204ENST00000526846 NEUROD2Q15784 382 aa21.14■□□□□ 0.97
CHD7-204ENST00000526846 MRS2Q9HD23 443 aa21.14■□□□□ 0.97
CHD7-204ENST00000526846 SRP68Q9UHB9 627 aaKnown RBP21.14■□□□□ 0.97
CHD7-204ENST00000526846 NRXN2Q9P2S2 1712 aa21.13■□□□□ 0.97
CHD7-204ENST00000526846 SNRPA1P09661 255 aaKnown RBP21.13■□□□□ 0.97
CHD7-204ENST00000526846 EIF4A1P60842 406 aaKnown RBP21.13■□□□□ 0.97
CHD7-204ENST00000526846 APAF1O14727 1248 aa21.12■□□□□ 0.97
CHD7-204ENST00000526846 BABAM1Q9NWV8 329 aa21.12■□□□□ 0.97
CHD7-204ENST00000526846 A1BGP04217 495 aa21.11■□□□□ 0.97
CHD7-204ENST00000526846 CANXP27824 592 aaKnown RBP21.11■□□□□ 0.97
CHD7-204ENST00000526846 GIGYF1O75420 1035 aaPredicted RBP21.1■□□□□ 0.97
CHD7-204ENST00000526846 NLGN1Q8N2Q7 840 aa21.1■□□□□ 0.97
CHD7-204ENST00000526846 NARFQ9UHQ1 456 aa21.1■□□□□ 0.97
CHD7-204ENST00000526846 MMP10P09238 476 aa21.09■□□□□ 0.97
CHD7-204ENST00000526846 IL6STP40189 918 aaPredicted RBP21.09■□□□□ 0.97
CHD7-204ENST00000526846 FKBP8Q14318 412 aa21.09■□□□□ 0.97
CHD7-204ENST00000526846 BCL2L12Q9HB09 334 aa21.09■□□□□ 0.97
CHD7-204ENST00000526846 TSPYL4Q9UJ04 414 aa21.09■□□□□ 0.97
CHD7-204ENST00000526846 BRCA1P38398 1863 aaKnown RBP21.09■□□□□ 0.97
CHD7-204ENST00000526846 NBPF26B4DH59 902 aa21.08■□□□□ 0.97
CHD7-204ENST00000526846 CHL1O00533 1208 aa21.08■□□□□ 0.97
CHD7-204ENST00000526846 USPL1Q5W0Q7 1092 aa21.08■□□□□ 0.97
CHD7-204ENST00000526846 NBPF10Q6P3W6 841 aaKnown RBP21.08■□□□□ 0.97
CHD7-204ENST00000526846 NBPF15Q8N660 670 aa21.08■□□□□ 0.97
CHD7-204ENST00000526846 NLGN2Q8NFZ4 835 aa21.08■□□□□ 0.97
CHD7-204ENST00000526846 N4BP2Q86UW6 1770 aaPredicted RBP21.08■□□□□ 0.96
CHD7-204ENST00000526846 C10orf71Q711Q0 1435 aa21.07■□□□□ 0.96
CHD7-204ENST00000526846 PIP4K2AP48426 406 aaPredicted RBP21.06■□□□□ 0.96
CHD7-204ENST00000526846 CD2APQ9Y5K6 639 aa21.06■□□□□ 0.96
CHD7-204ENST00000526846 NUP98P52948 1817 aa21.06■□□□□ 0.96
CHD7-204ENST00000526846 ZPR1O75312 459 aa21.05■□□□□ 0.96
CHD7-204ENST00000526846 TM4SF1P30408 202 aa21.05■□□□□ 0.96
CHD7-204ENST00000526846 DDR1Q08345 913 aa21.05■□□□□ 0.96
CHD7-204ENST00000526846 A0A087WZG4 1122 aa21.04■□□□□ 0.96
CHD7-204ENST00000526846 ZNF853P0CG23 659 aa21.04■□□□□ 0.96
CHD7-204ENST00000526846 KLHL34Q8N239 644 aa21.04■□□□□ 0.96
CHD7-204ENST00000526846 GOLGB1Q14789 3259 aaKnown RBP21.03■□□□□ 0.96
CHD7-204ENST00000526846 CFAP44Q96MT7 982 aa21.03■□□□□ 0.96
CHD7-204ENST00000526846 CHD4Q14839 1912 aa21.02■□□□□ 0.96
CHD7-204ENST00000526846 POLRMTO00411 1230 aaKnown RBP21.02■□□□□ 0.96
CHD7-204ENST00000526846 CAMTA2O94983 1202 aa21.02■□□□□ 0.96
CHD7-204ENST00000526846 ANKRD31Q8N7Z5 1873 aa21.02■□□□□ 0.96
CHD7-204ENST00000526846 UTRNP46939 3433 aa21.02■□□□□ 0.96
CHD7-204ENST00000526846 DLEC1Q9Y238 1755 aa21.01■□□□□ 0.95
CHD7-204ENST00000526846 NFIXQ14938 502 aa21.01■□□□□ 0.95
CHD7-204ENST00000526846 CCDC27Q2M243 656 aa21.01■□□□□ 0.95
CHD7-204ENST00000526846 NCBP3Q53F19 620 aaKnown RBP21.01■□□□□ 0.95
CHD7-204ENST00000526846 TBC1D2BQ9UPU7 963 aa21.01■□□□□ 0.95
CHD7-204ENST00000526846 PXDNLA1KZ92 1463 aa21.01■□□□□ 0.95
CHD7-204ENST00000526846 KRT24Q2M2I5 525 aa21■□□□□ 0.95
CHD7-204ENST00000526846 ZNF330Q9Y3S2 320 aaPredicted RBP21■□□□□ 0.95
CHD7-204ENST00000526846 PARP3Q9Y6F1 533 aa21■□□□□ 0.95
CHD7-204ENST00000526846 LRP10Q7Z4F1 713 aa20.99■□□□□ 0.95
CHD7-204ENST00000526846 DZIP3Q86Y13 1208 aaKnown RBP20.99■□□□□ 0.95
CHD7-204ENST00000526846 MBIPQ9NS73 344 aa20.99■□□□□ 0.95
CHD7-204ENST00000526846 IFT57Q9NWB7 429 aa20.99■□□□□ 0.95
CHD7-204ENST00000526846 LAS1LQ9Y4W2 734 aaKnown RBP20.99■□□□□ 0.95
CHD7-204ENST00000526846 ERBB4Q15303 1308 aa20.99■□□□□ 0.95
CHD7-204ENST00000526846 SENP3-EIF4A1A0A087X0R7 540 aa20.98■□□□□ 0.95
CHD7-204ENST00000526846 PDIA6Q15084 440 aa20.97■□□□□ 0.95
CHD7-204ENST00000526846 TBC1D9BQ66K14 1250 aa20.97■□□□□ 0.95
CHD7-204ENST00000526846 WWC1Q8IX03 1113 aa20.97■□□□□ 0.95
CHD7-204ENST00000526846 ANKRD36CQ5JPF3 1778 aa20.97■□□□□ 0.95
CHD7-204ENST00000526846 ARFGEF1Q9Y6D6 1849 aa20.97■□□□□ 0.95
CHD7-204ENST00000526846 CALD1Q05682 793 aaKnown RBP20.96■□□□□ 0.95
CHD7-204ENST00000526846 FAM9BQ8IZU0 186 aa20.96■□□□□ 0.95
CHD7-204ENST00000526846 RGL2O15211 777 aa20.95■□□□□ 0.94
CHD7-204ENST00000526846 GNAI1P63096 354 aa20.95■□□□□ 0.94
CHD7-204ENST00000526846 COL11A2P13942 1736 aaPredicted RBP20.95■□□□□ 0.94
CHD7-204ENST00000526846 HOXB7P09629 217 aa20.94■□□□□ 0.94
CHD7-204ENST00000526846 PROSER3Q2NL68 480 aa20.94■□□□□ 0.94
CHD7-204ENST00000526846 CLEC4GQ6UXB4 293 aa20.94■□□□□ 0.94
CHD7-204ENST00000526846 YBX3P16989 372 aaKnown RBP eCLIP20.93■□□□□ 0.94
CHD7-204ENST00000526846 NPM2Q86SE8 214 aaKnown RBP20.93■□□□□ 0.94
CHD7-204ENST00000526846 CARMIL3Q8ND23 1372 aa20.93■□□□□ 0.94
CHD7-204ENST00000526846 SERPINB2P05120 415 aa20.92■□□□□ 0.94
CHD7-204ENST00000526846 MYL6BP14649 208 aa20.92■□□□□ 0.94
CHD7-204ENST00000526846 EIF2S2P20042 333 aaKnown RBP20.92■□□□□ 0.94
CHD7-204ENST00000526846 TGFB2P61812 414 aa20.92■□□□□ 0.94
CHD7-204ENST00000526846 TTLL7Q6ZT98 887 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms