RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 CHL1O00533 1208 aa22.6■■□□□ 1.21
LMX1B-203ENST00000526117 EIF4A1P60842 406 aaKnown RBP22.6■■□□□ 1.21
LMX1B-203ENST00000526117 SGIP1Q9BQI5 828 aa22.6■■□□□ 1.21
LMX1B-203ENST00000526117 C4AP0C0L4 1744 aa22.6■■□□□ 1.21
LMX1B-203ENST00000526117 TSPYL4Q9UJ04 414 aa22.59■■□□□ 1.21
LMX1B-203ENST00000526117 SOS1Q07889 1333 aaPredicted RBP22.58■■□□□ 1.21
LMX1B-203ENST00000526117 ZBTB7AO95365 584 aa22.58■■□□□ 1.21
LMX1B-203ENST00000526117 ZNF853P0CG23 659 aa22.58■■□□□ 1.21
LMX1B-203ENST00000526117 PTGER2P43116 358 aa22.58■■□□□ 1.21
LMX1B-203ENST00000526117 TRAPPC3LQ5T215 181 aa22.58■■□□□ 1.21
LMX1B-203ENST00000526117 CFAP44Q96MT7 982 aa22.58■■□□□ 1.21
LMX1B-203ENST00000526117 MIS18AQ9NYP9 233 aa22.58■■□□□ 1.21
LMX1B-203ENST00000526117 GIGYF1O75420 1035 aaPredicted RBP22.56■■□□□ 1.2
LMX1B-203ENST00000526117 FAM9BQ8IZU0 186 aa22.56■■□□□ 1.2
LMX1B-203ENST00000526117 IFT57Q9NWB7 429 aa22.56■■□□□ 1.2
LMX1B-203ENST00000526117 ZBTB1Q9Y2K1 713 aa22.56■■□□□ 1.2
LMX1B-203ENST00000526117 PHF14O94880 888 aa22.55■■□□□ 1.2
LMX1B-203ENST00000526117 ARHGEF1Q92888 912 aaKnown RBP22.55■■□□□ 1.2
LMX1B-203ENST00000526117 IL16Q14005 1332 aa22.55■■□□□ 1.2
LMX1B-203ENST00000526117 COL15A1P39059 1388 aa22.54■■□□□ 1.2
LMX1B-203ENST00000526117 EIF5P55010 431 aaKnown RBP22.54■■□□□ 1.2
LMX1B-203ENST00000526117 WWC1Q8IX03 1113 aa22.54■■□□□ 1.2
LMX1B-203ENST00000526117 IL6STP40189 918 aaPredicted RBP22.53■■□□□ 1.2
LMX1B-203ENST00000526117 GNAI1P63096 354 aa22.53■■□□□ 1.2
LMX1B-203ENST00000526117 USP16Q9Y5T5 823 aa22.53■■□□□ 1.2
LMX1B-203ENST00000526117 MSH5O43196 834 aa22.52■■□□□ 1.2
LMX1B-203ENST00000526117 ATF5Q9Y2D1 282 aaPredicted RBP22.52■■□□□ 1.2
LMX1B-203ENST00000526117 USP42Q9H9J4 1324 aaKnown RBP22.52■■□□□ 1.2
LMX1B-203ENST00000526117 PRAMEF22A3QJZ6 481 aa22.51■■□□□ 1.19
LMX1B-203ENST00000526117 HOXB7P09629 217 aa22.51■■□□□ 1.19
LMX1B-203ENST00000526117 RFC4P35249 363 aa22.51■■□□□ 1.19
LMX1B-203ENST00000526117 SMIM5Q71RC9 77 aa22.51■■□□□ 1.19
LMX1B-203ENST00000526117 ERBB4Q15303 1308 aa22.51■■□□□ 1.19
LMX1B-203ENST00000526117 A0A087WZG4 1122 aa22.5■■□□□ 1.19
LMX1B-203ENST00000526117 POLD1P28340 1107 aa22.5■■□□□ 1.19
LMX1B-203ENST00000526117 WDR63Q8IWG1 891 aa22.5■■□□□ 1.19
LMX1B-203ENST00000526117 MIER1Q8N108 512 aa22.49■■□□□ 1.19
LMX1B-203ENST00000526117 NLGN1Q8N2Q7 840 aa22.49■■□□□ 1.19
LMX1B-203ENST00000526117 MBIPQ9NS73 344 aa22.49■■□□□ 1.19
LMX1B-203ENST00000526117 SCN7AQ01118 1682 aa22.49■■□□□ 1.19
LMX1B-203ENST00000526117 RGL2O15211 777 aa22.48■■□□□ 1.19
LMX1B-203ENST00000526117 A1BGP04217 495 aa22.48■■□□□ 1.19
LMX1B-203ENST00000526117 GYS1P13807 737 aa22.48■■□□□ 1.19
LMX1B-203ENST00000526117 NARFQ9UHQ1 456 aa22.48■■□□□ 1.19
LMX1B-203ENST00000526117 CANXP27824 592 aaKnown RBP22.47■■□□□ 1.19
LMX1B-203ENST00000526117 ARXQ96QS3 562 aa22.46■■□□□ 1.19
LMX1B-203ENST00000526117 LAS1LQ9Y4W2 734 aaKnown RBP22.46■■□□□ 1.19
LMX1B-203ENST00000526117 ZNF521Q96K83 1311 aa22.46■■□□□ 1.19
LMX1B-203ENST00000526117 NBPF26B4DH59 902 aa22.45■■□□□ 1.18
LMX1B-203ENST00000526117 NBPF10Q6P3W6 841 aaKnown RBP22.45■■□□□ 1.18
LMX1B-203ENST00000526117 NBPF15Q8N660 670 aa22.45■■□□□ 1.18
LMX1B-203ENST00000526117 PPP1R1BQ9UD71 204 aaPredicted RBP22.45■■□□□ 1.18
LMX1B-203ENST00000526117 BCORQ6W2J9 1755 aa22.45■■□□□ 1.18
LMX1B-203ENST00000526117 ZPR1O75312 459 aa22.44■■□□□ 1.18
LMX1B-203ENST00000526117 MSL1Q68DK7 614 aa22.44■■□□□ 1.18
LMX1B-203ENST00000526117 NPM2Q86SE8 214 aaKnown RBP22.42■■□□□ 1.18
LMX1B-203ENST00000526117 SRP68Q9UHB9 627 aaKnown RBP22.42■■□□□ 1.18
LMX1B-203ENST00000526117 USPL1Q5W0Q7 1092 aa22.41■■□□□ 1.18
LMX1B-203ENST00000526117 CHMP4AQ9BY43 222 aa22.41■■□□□ 1.18
LMX1B-203ENST00000526117 LRP10Q7Z4F1 713 aa22.4■■□□□ 1.18
LMX1B-203ENST00000526117 BCL2L12Q9HB09 334 aa22.4■■□□□ 1.18
LMX1B-203ENST00000526117 CAMTA2O94983 1202 aa22.39■■□□□ 1.17
LMX1B-203ENST00000526117 MMP10P09238 476 aa22.39■■□□□ 1.17
LMX1B-203ENST00000526117 TM4SF1P30408 202 aa22.39■■□□□ 1.17
LMX1B-203ENST00000526117 FKBP8Q14318 412 aa22.39■■□□□ 1.17
LMX1B-203ENST00000526117 PDIA6Q15084 440 aa22.39■■□□□ 1.17
LMX1B-203ENST00000526117 KRT24Q2M2I5 525 aa22.39■■□□□ 1.17
LMX1B-203ENST00000526117 DUSP27Q5VZP5 1158 aa22.39■■□□□ 1.17
LMX1B-203ENST00000526117 CLEC4GQ6UXB4 293 aa22.39■■□□□ 1.17
LMX1B-203ENST00000526117 DZIP3Q86Y13 1208 aaKnown RBP22.39■■□□□ 1.17
LMX1B-203ENST00000526117 NRXN2Q9P2S2 1712 aa22.37■■□□□ 1.17
LMX1B-203ENST00000526117 KIF13BQ9NQT8 1826 aa22.37■■□□□ 1.17
LMX1B-203ENST00000526117 PIP4K2AP48426 406 aaPredicted RBP22.37■■□□□ 1.17
LMX1B-203ENST00000526117 FHDC1Q9C0D6 1143 aaPredicted RBP22.37■■□□□ 1.17
LMX1B-203ENST00000526117 DDX21Q9NR30 783 aaKnown RBP eCLIP22.37■■□□□ 1.17
LMX1B-203ENST00000526117 CD2APQ9Y5K6 639 aa22.37■■□□□ 1.17
LMX1B-203ENST00000526117 FANCIQ9NVI1 1328 aa22.36■■□□□ 1.17
LMX1B-203ENST00000526117 ERVV-1B6SEH8 477 aa22.36■■□□□ 1.17
LMX1B-203ENST00000526117 HDGFL1Q5TGJ6 251 aa22.36■■□□□ 1.17
LMX1B-203ENST00000526117 TBC1D2BQ9UPU7 963 aa22.36■■□□□ 1.17
LMX1B-203ENST00000526117 C10orf71Q711Q0 1435 aa22.35■■□□□ 1.17
LMX1B-203ENST00000526117 EIF2S2P20042 333 aaKnown RBP22.35■■□□□ 1.17
LMX1B-203ENST00000526117 C8orf58Q8NAV2 365 aa22.35■■□□□ 1.17
LMX1B-203ENST00000526117 TSR2Q969E8 191 aaKnown RBP22.35■■□□□ 1.17
LMX1B-203ENST00000526117 SYT17Q9BSW7 474 aa22.35■■□□□ 1.17
LMX1B-203ENST00000526117 MYH16Q9H6N6 1097 aa22.35■■□□□ 1.17
LMX1B-203ENST00000526117 DBF4Q9UBU7 674 aaPredicted RBP22.35■■□□□ 1.17
LMX1B-203ENST00000526117 ZNF652Q9Y2D9 606 aa22.35■■□□□ 1.17
LMX1B-203ENST00000526117 ZNF330Q9Y3S2 320 aaPredicted RBP22.35■■□□□ 1.17
LMX1B-203ENST00000526117 SALL2Q9Y467 1007 aaPredicted RBP22.35■■□□□ 1.17
LMX1B-203ENST00000526117 PARP3Q9Y6F1 533 aa22.35■■□□□ 1.17
LMX1B-203ENST00000526117 SENP3-EIF4A1A0A087X0R7 540 aa22.34■■□□□ 1.17
LMX1B-203ENST00000526117 POLRMTO00411 1230 aaKnown RBP22.34■■□□□ 1.17
LMX1B-203ENST00000526117 DDR1Q08345 913 aa22.33■■□□□ 1.17
LMX1B-203ENST00000526117 NFIXQ14938 502 aa22.33■■□□□ 1.17
LMX1B-203ENST00000526117 MAP3K15Q6ZN16 1313 aa22.32■■□□□ 1.16
LMX1B-203ENST00000526117 GOLGA2Q08379 1002 aa22.32■■□□□ 1.16
LMX1B-203ENST00000526117 SPINK5Q9NQ38 1064 aaPredicted RBP22.32■■□□□ 1.16
LMX1B-203ENST00000526117 ATP10DQ9P241 1426 aa22.31■■□□□ 1.16
LMX1B-203ENST00000526117 CARMIL3Q8ND23 1372 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms