RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 SLC39A6Q13433 755 aa14.48□□□□□ -0.09
VPS26B-203ENST00000525918 C9orf131Q5VYM1 1079 aa14.48□□□□□ -0.09
VPS26B-203ENST00000525918 USPL1Q5W0Q7 1092 aa14.48□□□□□ -0.09
VPS26B-203ENST00000525918 UBR2Q8IWV8 1755 aa14.47□□□□□ -0.09
VPS26B-203ENST00000525918 KCPQ6ZWJ8 1503 aa14.47□□□□□ -0.09
VPS26B-203ENST00000525918 MTHFSDQ2M296 383 aaKnown RBP14.47□□□□□ -0.09
VPS26B-203ENST00000525918 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
VPS26B-203ENST00000525918 NMRK2Q9NPI5 230 aa14.47□□□□□ -0.09
VPS26B-203ENST00000525918 NARFQ9UHQ1 456 aa14.47□□□□□ -0.09
VPS26B-203ENST00000525918 NRXN2Q9P2S2 1712 aa14.46□□□□□ -0.09
VPS26B-203ENST00000525918 CHRNA5P30532 468 aa14.46□□□□□ -0.09
VPS26B-203ENST00000525918 COL15A1P39059 1388 aa14.46□□□□□ -0.1
VPS26B-203ENST00000525918 DLEC1Q9Y238 1755 aa14.45□□□□□ -0.1
VPS26B-203ENST00000525918 CC2D1BQ5T0F9 858 aaKnown RBP14.45□□□□□ -0.1
VPS26B-203ENST00000525918 ZBTB1Q9Y2K1 713 aa14.45□□□□□ -0.1
VPS26B-203ENST00000525918 KDM2BQ8NHM5 1336 aa14.44□□□□□ -0.1
VPS26B-203ENST00000525918 CCDC88AQ3V6T2 1871 aa14.44□□□□□ -0.1
VPS26B-203ENST00000525918 NFIXQ14938 502 aa14.44□□□□□ -0.1
VPS26B-203ENST00000525918 C16orf71Q8IYS4 520 aaPredicted RBP14.44□□□□□ -0.1
VPS26B-203ENST00000525918 RNF181Q9P0P0 153 aa14.44□□□□□ -0.1
VPS26B-203ENST00000525918 TNRC6CQ9HCJ0 1690 aaKnown RBP14.43□□□□□ -0.1
VPS26B-203ENST00000525918 TTC5Q8N0Z6 440 aa14.43□□□□□ -0.1
VPS26B-203ENST00000525918 RBM46Q8TBY0 533 aaKnown RBP14.43□□□□□ -0.1
VPS26B-203ENST00000525918 WDR90Q96KV7 1748 aa14.43□□□□□ -0.1
VPS26B-203ENST00000525918 SIPA1L3O60292 1781 aaPredicted RBP14.42□□□□□ -0.1
VPS26B-203ENST00000525918 STARD3NLO95772 234 aa14.42□□□□□ -0.1
VPS26B-203ENST00000525918 SERPINB2P05120 415 aa14.42□□□□□ -0.1
VPS26B-203ENST00000525918 CANXP27824 592 aaKnown RBP14.42□□□□□ -0.1
VPS26B-203ENST00000525918 DNAJC5GQ8N7S2 189 aa14.42□□□□□ -0.1
VPS26B-203ENST00000525918 BCL2L12Q9HB09 334 aa14.42□□□□□ -0.1
VPS26B-203ENST00000525918 NPC1L1Q9UHC9 1359 aa14.41□□□□□ -0.1
VPS26B-203ENST00000525918 A0A087WZG4 1122 aa14.4□□□□□ -0.1
VPS26B-203ENST00000525918 GNAT3A8MTJ3 354 aa14.4□□□□□ -0.1
VPS26B-203ENST00000525918 U2SURPO15042 1029 aaKnown RBP14.4□□□□□ -0.1
VPS26B-203ENST00000525918 EIF5P55010 431 aaKnown RBP14.4□□□□□ -0.1
VPS26B-203ENST00000525918 TEFQ10587 303 aa14.4□□□□□ -0.1
VPS26B-203ENST00000525918 FSTL1Q12841 308 aa14.4□□□□□ -0.1
VPS26B-203ENST00000525918 TEX13AQ9BXU3 409 aaPredicted RBP14.4□□□□□ -0.1
VPS26B-203ENST00000525918 RRAGCQ9HB90 399 aa14.4□□□□□ -0.1
VPS26B-203ENST00000525918 ZC3H4Q9UPT8 1303 aaKnown RBP14.4□□□□□ -0.1
VPS26B-203ENST00000525918 COL3A1P02461 1466 aaPredicted RBP14.39□□□□□ -0.11
VPS26B-203ENST00000525918 H0YIN7 160 aa14.39□□□□□ -0.11
VPS26B-203ENST00000525918 ZNF790Q6PG37 636 aa14.39□□□□□ -0.11
VPS26B-203ENST00000525918 TTLL6Q8N841 843 aa14.39□□□□□ -0.11
VPS26B-203ENST00000525918 IL17REQ8NFR9 667 aa14.39□□□□□ -0.11
VPS26B-203ENST00000525918 GAS2L2Q8NHY3 880 aa14.39□□□□□ -0.11
VPS26B-203ENST00000525918 ZNF496Q96IT1 587 aaPredicted RBP14.39□□□□□ -0.11
VPS26B-203ENST00000525918 ANKRD31Q8N7Z5 1873 aa14.38□□□□□ -0.11
VPS26B-203ENST00000525918 HEG1Q9ULI3 1381 aa14.38□□□□□ -0.11
VPS26B-203ENST00000525918 LMNB1P20700 586 aa14.38□□□□□ -0.11
VPS26B-203ENST00000525918 C2CD5Q86YS7 1000 aa14.38□□□□□ -0.11
VPS26B-203ENST00000525918 SCN7AQ01118 1682 aa14.37□□□□□ -0.11
VPS26B-203ENST00000525918 RASSF7Q02833 373 aa14.37□□□□□ -0.11
VPS26B-203ENST00000525918 BICDL1Q6ZP65 573 aa14.37□□□□□ -0.11
VPS26B-203ENST00000525918 TIAM2Q8IVF5 1701 aa14.36□□□□□ -0.11
VPS26B-203ENST00000525918 IL6STP40189 918 aaPredicted RBP14.36□□□□□ -0.11
VPS26B-203ENST00000525918 CNGB1Q14028 1251 aaPredicted RBP14.36□□□□□ -0.11
VPS26B-203ENST00000525918 FMNL2Q96PY5 1086 aa14.36□□□□□ -0.11
VPS26B-203ENST00000525918 PDZRN3Q9UPQ7 1066 aa14.36□□□□□ -0.11
VPS26B-203ENST00000525918 DICER1Q9UPY3 1922 aaKnown RBP14.36□□□□□ -0.11
VPS26B-203ENST00000525918 CARMIL3Q8ND23 1372 aa14.35□□□□□ -0.11
VPS26B-203ENST00000525918 GLTPD2A6NH11 291 aa14.35□□□□□ -0.11
VPS26B-203ENST00000525918 PDE6BP35913 854 aa14.35□□□□□ -0.11
VPS26B-203ENST00000525918 TBC1D9BQ66K14 1250 aa14.35□□□□□ -0.11
VPS26B-203ENST00000525918 NPM2Q86SE8 214 aaKnown RBP14.35□□□□□ -0.11
VPS26B-203ENST00000525918 SMC1BQ8NDV3 1235 aa14.35□□□□□ -0.11
VPS26B-203ENST00000525918 BRIP1Q9BX63 1249 aa14.35□□□□□ -0.11
VPS26B-203ENST00000525918 TBC1D2BQ9UPU7 963 aa14.35□□□□□ -0.11
VPS26B-203ENST00000525918 ZNF330Q9Y3S2 320 aaPredicted RBP14.35□□□□□ -0.11
VPS26B-203ENST00000525918 FER1L6Q2WGJ9 1857 aa14.35□□□□□ -0.11
VPS26B-203ENST00000525918 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
VPS26B-203ENST00000525918 VEGFAP15692 232 aaPredicted RBP14.34□□□□□ -0.11
VPS26B-203ENST00000525918 PRELPP51888 382 aa14.34□□□□□ -0.11
VPS26B-203ENST00000525918 KLRG1Q96E93 195 aa14.34□□□□□ -0.11
VPS26B-203ENST00000525918 CACNA1SQ13698 1873 aa14.33□□□□□ -0.11
VPS26B-203ENST00000525918 BTBD11A6QL63 1104 aa14.33□□□□□ -0.12
VPS26B-203ENST00000525918 ZNF622Q969S3 477 aaKnown RBP eCLIP14.33□□□□□ -0.12
VPS26B-203ENST00000525918 PHACTR3Q96KR7 559 aa14.33□□□□□ -0.12
VPS26B-203ENST00000525918 CFAP53Q96M91 514 aa14.33□□□□□ -0.12
VPS26B-203ENST00000525918 COL11A2P13942 1736 aaPredicted RBP14.32□□□□□ -0.12
VPS26B-203ENST00000525918 BCORQ6W2J9 1755 aa14.32□□□□□ -0.12
VPS26B-203ENST00000525918 NFKBIEO00221 500 aa14.32□□□□□ -0.12
VPS26B-203ENST00000525918 A1BGP04217 495 aa14.32□□□□□ -0.12
VPS26B-203ENST00000525918 PRKAR2BP31323 418 aa14.32□□□□□ -0.12
VPS26B-203ENST00000525918 HTRA3P83110 453 aa14.32□□□□□ -0.12
VPS26B-203ENST00000525918 PRR5LQ6MZQ0 368 aa14.32□□□□□ -0.12
VPS26B-203ENST00000525918 DPY19L2Q6NUT2 758 aa14.32□□□□□ -0.12
VPS26B-203ENST00000525918 SETDB2Q96T68 719 aa14.32□□□□□ -0.12
VPS26B-203ENST00000525918 JMYQ8N9B5 988 aa14.31□□□□□ -0.12
VPS26B-203ENST00000525918 RSPH6AQ9H0K4 717 aa14.31□□□□□ -0.12
VPS26B-203ENST00000525918 NUDCQ9Y266 331 aa14.31□□□□□ -0.12
VPS26B-203ENST00000525918 ARFGEF2Q9Y6D5 1785 aa14.31□□□□□ -0.12
VPS26B-203ENST00000525918 SLX4Q8IY92 1834 aa14.3□□□□□ -0.12
VPS26B-203ENST00000525918 NPHP1O15259 732 aa14.3□□□□□ -0.12
VPS26B-203ENST00000525918 KCNQ3O43525 872 aa14.3□□□□□ -0.12
VPS26B-203ENST00000525918 C21orf2O43822 256 aa14.3□□□□□ -0.12
VPS26B-203ENST00000525918 CAMTA2O94983 1202 aa14.3□□□□□ -0.12
VPS26B-203ENST00000525918 CCDC24Q8N4L8 307 aa14.3□□□□□ -0.12
VPS26B-203ENST00000525918 CNBD1Q8NA66 436 aa14.3□□□□□ -0.12
VPS26B-203ENST00000525918 USP16Q9Y5T5 823 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms