RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 NWD2Q9ULI1 1742 aa12.43□□□□□ -0.42
VPS13B-212ENST00000524330 SLC39A6Q13433 755 aa12.43□□□□□ -0.42
VPS13B-212ENST00000524330 ANKRD45Q5TZF3 282 aa12.43□□□□□ -0.42
VPS13B-212ENST00000524330 C1orf115Q9H7X2 142 aa12.43□□□□□ -0.42
VPS13B-212ENST00000524330 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
VPS13B-212ENST00000524330 PI4KAP2A4QPH2 592 aa12.42□□□□□ -0.42
VPS13B-212ENST00000524330 CEP85Q6P2H3 762 aa12.42□□□□□ -0.42
VPS13B-212ENST00000524330 RIC3Q7Z5B4 369 aa12.42□□□□□ -0.42
VPS13B-212ENST00000524330 PI4KAP1Q8N8J0 262 aa12.42□□□□□ -0.42
VPS13B-212ENST00000524330 CERKQ8TCT0 537 aa12.42□□□□□ -0.42
VPS13B-212ENST00000524330 ZNF496Q96IT1 587 aaPredicted RBP12.42□□□□□ -0.42
VPS13B-212ENST00000524330 MEIS3Q99687 375 aa12.42□□□□□ -0.42
VPS13B-212ENST00000524330 DCTPP1Q9H773 170 aa12.42□□□□□ -0.42
VPS13B-212ENST00000524330 PHAXQ9H814 394 aaKnown RBP12.42□□□□□ -0.42
VPS13B-212ENST00000524330 DISP2A7MBM2 1401 aa12.42□□□□□ -0.42
VPS13B-212ENST00000524330 IBTKQ9P2D0 1353 aaPredicted RBP12.42□□□□□ -0.42
VPS13B-212ENST00000524330 DDB1Q16531 1140 aa12.41□□□□□ -0.42
VPS13B-212ENST00000524330 HSP90AB4PQ58FF6 505 aa12.41□□□□□ -0.42
VPS13B-212ENST00000524330 VSIG10Q8N0Z9 540 aa12.41□□□□□ -0.42
VPS13B-212ENST00000524330 C9orf78Q9NZ63 289 aaPredicted RBP12.41□□□□□ -0.42
VPS13B-212ENST00000524330 LRP6O75581 1613 aa12.4□□□□□ -0.42
VPS13B-212ENST00000524330 SPATA31A1Q5TZJ5 1347 aa12.4□□□□□ -0.42
VPS13B-212ENST00000524330 TNS2Q63HR2 1409 aa12.4□□□□□ -0.42
VPS13B-212ENST00000524330 ATP8B2P98198 1209 aa12.4□□□□□ -0.42
VPS13B-212ENST00000524330 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
VPS13B-212ENST00000524330 LINS1Q8NG48 757 aa12.4□□□□□ -0.42
VPS13B-212ENST00000524330 DDRGK1Q96HY6 314 aa12.4□□□□□ -0.42
VPS13B-212ENST00000524330 MAP3K2Q9Y2U5 619 aa12.4□□□□□ -0.42
VPS13B-212ENST00000524330 LAMB4A4D0S4 1761 aa12.4□□□□□ -0.42
VPS13B-212ENST00000524330 STARD3NLO95772 234 aa12.39□□□□□ -0.43
VPS13B-212ENST00000524330 BEND3Q5T5X7 828 aa12.39□□□□□ -0.43
VPS13B-212ENST00000524330 NPM2Q86SE8 214 aaKnown RBP12.39□□□□□ -0.43
VPS13B-212ENST00000524330 UNC5CLQ8IV45 518 aa12.39□□□□□ -0.43
VPS13B-212ENST00000524330 NGLY1Q96IV0 654 aa12.39□□□□□ -0.43
VPS13B-212ENST00000524330 WNK3Q9BYP7 1800 aa12.39□□□□□ -0.43
VPS13B-212ENST00000524330 SPATA31A5Q5VU36 1347 aa12.38□□□□□ -0.43
VPS13B-212ENST00000524330 SPATA31A7Q8IWB4 1347 aa12.38□□□□□ -0.43
VPS13B-212ENST00000524330 NRAPQ86VF7 1730 aa12.38□□□□□ -0.43
VPS13B-212ENST00000524330 RAB11FIP3O75154 756 aa12.38□□□□□ -0.43
VPS13B-212ENST00000524330 AIMP1Q12904 312 aaKnown RBP12.38□□□□□ -0.43
VPS13B-212ENST00000524330 ANKRD13DQ6ZTN6 518 aa12.38□□□□□ -0.43
VPS13B-212ENST00000524330 LNPKQ9C0E8 428 aa12.38□□□□□ -0.43
VPS13B-212ENST00000524330 SLIT2O94813 1529 aa12.37□□□□□ -0.43
VPS13B-212ENST00000524330 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
VPS13B-212ENST00000524330 MYL6BP14649 208 aa12.37□□□□□ -0.43
VPS13B-212ENST00000524330 MEX3CQ5U5Q3 659 aaKnown RBP12.37□□□□□ -0.43
VPS13B-212ENST00000524330 COPS6Q7L5N1 327 aa12.37□□□□□ -0.43
VPS13B-212ENST00000524330 PLBD2Q8NHP8 589 aa12.37□□□□□ -0.43
VPS13B-212ENST00000524330 XAGE3Q8WTP9 111 aa12.37□□□□□ -0.43
VPS13B-212ENST00000524330 USP44Q9H0E7 712 aa12.37□□□□□ -0.43
VPS13B-212ENST00000524330 LRRFIP2Q9Y608 721 aaKnown RBP12.37□□□□□ -0.43
VPS13B-212ENST00000524330 ADCY9O60503 1353 aa12.37□□□□□ -0.43
VPS13B-212ENST00000524330 PAPPAQ13219 1627 aa12.37□□□□□ -0.43
VPS13B-212ENST00000524330 ANXA1P04083 346 aa12.36□□□□□ -0.43
VPS13B-212ENST00000524330 VPS72Q15906 364 aa12.36□□□□□ -0.43
VPS13B-212ENST00000524330 SIRT2Q8IXJ6 389 aa12.36□□□□□ -0.43
VPS13B-212ENST00000524330 METTL22Q9BUU2 404 aaPredicted RBP12.36□□□□□ -0.43
VPS13B-212ENST00000524330 USP16Q9Y5T5 823 aa12.36□□□□□ -0.43
VPS13B-212ENST00000524330 UBR2Q8IWV8 1755 aa12.35□□□□□ -0.43
VPS13B-212ENST00000524330 C5P01031 1676 aa12.35□□□□□ -0.43
VPS13B-212ENST00000524330 PRAMEF22A3QJZ6 481 aa12.35□□□□□ -0.43
VPS13B-212ENST00000524330 PTCD1O75127 700 aaKnown RBP12.35□□□□□ -0.43
VPS13B-212ENST00000524330 PDIA6Q15084 440 aa12.35□□□□□ -0.43
VPS13B-212ENST00000524330 C8orf34Q49A92 452 aa12.35□□□□□ -0.43
VPS13B-212ENST00000524330 BMP2KLQ5H9B9 411 aa12.35□□□□□ -0.43
VPS13B-212ENST00000524330 CASC1Q6TDU7 716 aa12.35□□□□□ -0.43
VPS13B-212ENST00000524330 SMARCC1Q92922 1105 aaPredicted RBP12.35□□□□□ -0.43
VPS13B-212ENST00000524330 C8orf37Q96NL8 207 aa12.35□□□□□ -0.43
VPS13B-212ENST00000524330 DAXXQ9UER7 740 aaPredicted RBP12.35□□□□□ -0.43
VPS13B-212ENST00000524330 GRM8O00222 908 aa12.34□□□□□ -0.43
VPS13B-212ENST00000524330 PROSER3Q2NL68 480 aa12.34□□□□□ -0.43
VPS13B-212ENST00000524330 KIF6Q6ZMV9 814 aa12.34□□□□□ -0.43
VPS13B-212ENST00000524330 ERICH6Q7L0X2 663 aa12.34□□□□□ -0.43
VPS13B-212ENST00000524330 SKAP1Q86WV1 359 aa12.34□□□□□ -0.43
VPS13B-212ENST00000524330 ERC1Q8IUD2 1116 aa12.34□□□□□ -0.43
VPS13B-212ENST00000524330 SYTL4Q96C24 671 aaPredicted RBP12.34□□□□□ -0.43
VPS13B-212ENST00000524330 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
VPS13B-212ENST00000524330 LRRCC1Q9C099 1032 aa12.34□□□□□ -0.43
VPS13B-212ENST00000524330 KCPQ6ZWJ8 1503 aa12.33□□□□□ -0.44
VPS13B-212ENST00000524330 HSP90AB3PQ58FF7 597 aa12.33□□□□□ -0.44
VPS13B-212ENST00000524330 FNBP4Q8N3X1 1017 aaPredicted RBP12.33□□□□□ -0.44
VPS13B-212ENST00000524330 SSH3Q8TE77 659 aa12.33□□□□□ -0.44
VPS13B-212ENST00000524330 PIGBQ92521 554 aa12.33□□□□□ -0.44
VPS13B-212ENST00000524330 MYD88Q99836 296 aa12.33□□□□□ -0.44
VPS13B-212ENST00000524330 BCL9O00512 1426 aa12.33□□□□□ -0.44
VPS13B-212ENST00000524330 UTYO14607 1347 aa12.33□□□□□ -0.44
VPS13B-212ENST00000524330 SRGAP3O43295 1099 aa12.32□□□□□ -0.44
VPS13B-212ENST00000524330 OS9Q13438 667 aaPredicted RBP12.32□□□□□ -0.44
VPS13B-212ENST00000524330 MTX1Q13505 466 aa12.32□□□□□ -0.44
VPS13B-212ENST00000524330 KIF1BPQ96EK5 621 aa12.32□□□□□ -0.44
VPS13B-212ENST00000524330 ATG3Q9NT62 314 aa12.32□□□□□ -0.44
VPS13B-212ENST00000524330 USP21Q9UK80 565 aa12.32□□□□□ -0.44
VPS13B-212ENST00000524330 A0A0G2JS52 829 aa12.31□□□□□ -0.44
VPS13B-212ENST00000524330 NEURL1BA8MQ27 555 aa12.31□□□□□ -0.44
VPS13B-212ENST00000524330 SURF6O75683 361 aaKnown RBP12.31□□□□□ -0.44
VPS13B-212ENST00000524330 MYT1Q01538 1121 aa12.31□□□□□ -0.44
VPS13B-212ENST00000524330 POLA2Q14181 598 aa12.31□□□□□ -0.44
VPS13B-212ENST00000524330 GCKRQ14397 625 aa12.31□□□□□ -0.44
VPS13B-212ENST00000524330 PPP1R42Q7Z4L9 355 aa12.31□□□□□ -0.44
VPS13B-212ENST00000524330 IPO9Q96P70 1041 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms