RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-215ENST00000524111 HSP90B1P14625 803 aaKnown RBP10.54□□□□□ -0.72
SREK1-215ENST00000524111 COPS6Q7L5N1 327 aa10.54□□□□□ -0.72
SREK1-215ENST00000524111 UBE3BQ7Z3V4 1068 aa10.54□□□□□ -0.72
SREK1-215ENST00000524111 XAGE3Q8WTP9 111 aa10.54□□□□□ -0.72
SREK1-215ENST00000524111 IFT172Q9UG01 1749 aa10.54□□□□□ -0.72
SREK1-215ENST00000524111 MAP2P11137 1827 aaKnown RBP10.54□□□□□ -0.72
SREK1-215ENST00000524111 PPFIA3O75145 1194 aa10.54□□□□□ -0.72
SREK1-215ENST00000524111 EIF4A1P60842 406 aaKnown RBP10.54□□□□□ -0.72
SREK1-215ENST00000524111 AMOTQ4VCS5 1084 aa10.54□□□□□ -0.72
SREK1-215ENST00000524111 ARHGEF10O15013 1369 aa10.54□□□□□ -0.72
SREK1-215ENST00000524111 MED14O60244 1454 aa10.54□□□□□ -0.72
SREK1-215ENST00000524111 BRPF1P55201 1214 aaPredicted RBP10.54□□□□□ -0.72
SREK1-215ENST00000524111 HSP90AB4PQ58FF6 505 aa10.54□□□□□ -0.72
SREK1-215ENST00000524111 AKAP4Q5JQC9 854 aa10.54□□□□□ -0.72
SREK1-215ENST00000524111 RNMTO43148 476 aaKnown RBP10.53□□□□□ -0.72
SREK1-215ENST00000524111 STK3Q13188 491 aa10.53□□□□□ -0.72
SREK1-215ENST00000524111 ESYT1Q9BSJ8 1104 aa10.53□□□□□ -0.72
SREK1-215ENST00000524111 ZBTB3Q9H5J0 574 aa10.53□□□□□ -0.72
SREK1-215ENST00000524111 AXIN2Q9Y2T1 843 aa10.53□□□□□ -0.72
SREK1-215ENST00000524111 NDUFB9Q9Y6M9 179 aa10.53□□□□□ -0.72
SREK1-215ENST00000524111 RBM27Q9P2N5 1060 aaKnown RBP10.53□□□□□ -0.72
SREK1-215ENST00000524111 KIAA0232Q92628 1395 aa10.53□□□□□ -0.72
SREK1-215ENST00000524111 PRPF40BQ6NWY9 871 aaKnown RBP10.53□□□□□ -0.72
SREK1-215ENST00000524111 BAG4O95429 457 aaKnown RBP10.53□□□□□ -0.72
SREK1-215ENST00000524111 ZKSCAN1P17029 563 aaPredicted RBP10.53□□□□□ -0.72
SREK1-215ENST00000524111 JAKMIP1Q96N16 626 aaKnown RBP10.53□□□□□ -0.72
SREK1-215ENST00000524111 PALD1Q9ULE6 856 aa10.53□□□□□ -0.72
SREK1-215ENST00000524111 HDAC5Q9UQL6 1122 aa10.53□□□□□ -0.72
SREK1-215ENST00000524111 PTCH1Q13635 1447 aa10.52□□□□□ -0.72
SREK1-215ENST00000524111 FIBPO43427 364 aa10.52□□□□□ -0.72
SREK1-215ENST00000524111 XRCC6P12956 609 aaKnown RBP eCLIP10.52□□□□□ -0.72
SREK1-215ENST00000524111 RUFY2Q8WXA3 655 aa10.52□□□□□ -0.72
SREK1-215ENST00000524111 TMX3Q96JJ7 454 aa10.52□□□□□ -0.72
SREK1-215ENST00000524111 GRPEL1Q9HAV7 217 aa10.52□□□□□ -0.72
SREK1-215ENST00000524111 GOLGA6L4A6NEF3 574 aa10.52□□□□□ -0.73
SREK1-215ENST00000524111 CASTP20810 708 aaKnown RBP10.52□□□□□ -0.73
SREK1-215ENST00000524111 SMC3Q9UQE7 1217 aa10.52□□□□□ -0.73
SREK1-215ENST00000524111 HTATSF1O43719 755 aaKnown RBP10.52□□□□□ -0.73
SREK1-215ENST00000524111 CHMLP26374 656 aa10.52□□□□□ -0.73
SREK1-215ENST00000524111 SKOR2Q2VWA4 1001 aaPredicted RBP10.52□□□□□ -0.73
SREK1-215ENST00000524111 SNX21Q969T3 373 aa10.52□□□□□ -0.73
SREK1-215ENST00000524111 ANO8Q9HCE9 1232 aaPredicted RBP10.52□□□□□ -0.73
SREK1-215ENST00000524111 SOS1Q07889 1333 aaPredicted RBP10.51□□□□□ -0.73
SREK1-215ENST00000524111 FERMT3Q86UX7 667 aa10.51□□□□□ -0.73
SREK1-215ENST00000524111 C19orf44Q9H6X5 657 aa10.51□□□□□ -0.73
SREK1-215ENST00000524111 CIZ1Q9ULV3 898 aaPredicted RBP10.51□□□□□ -0.73
SREK1-215ENST00000524111 A0A087WZG4 1122 aa10.51□□□□□ -0.73
SREK1-215ENST00000524111 KDM4AO75164 1064 aa10.51□□□□□ -0.73
SREK1-215ENST00000524111 MRE11P49959 708 aa10.51□□□□□ -0.73
SREK1-215ENST00000524111 ZNF496Q96IT1 587 aaPredicted RBP10.5□□□□□ -0.73
SREK1-215ENST00000524111 AGLP35573 1532 aa10.5□□□□□ -0.73
SREK1-215ENST00000524111 NASPP49321 788 aaPredicted RBP10.5□□□□□ -0.73
SREK1-215ENST00000524111 EDC3Q96F86 508 aaKnown RBP10.5□□□□□ -0.73
SREK1-215ENST00000524111 OVOS2A0A0J9YW53 1432 aa10.5□□□□□ -0.73
SREK1-215ENST00000524111 OVOS2Q6IE36 1432 aa10.5□□□□□ -0.73
SREK1-215ENST00000524111 GRM8O00222 908 aa10.5□□□□□ -0.73
SREK1-215ENST00000524111 KSR2Q6VAB6 950 aa10.5□□□□□ -0.73
SREK1-215ENST00000524111 CCDC83Q8IWF9 413 aa10.5□□□□□ -0.73
SREK1-215ENST00000524111 BICC1Q9H694 974 aaKnown RBP10.5□□□□□ -0.73
SREK1-215ENST00000524111 GLRX3O76003 335 aaKnown RBP10.49□□□□□ -0.73
SREK1-215ENST00000524111 USP16Q9Y5T5 823 aa10.49□□□□□ -0.73
SREK1-215ENST00000524111 SPATA31D1Q6ZQQ2 1576 aa10.49□□□□□ -0.73
SREK1-215ENST00000524111 CDC42BPGQ6DT37 1551 aa10.49□□□□□ -0.73
SREK1-215ENST00000524111 RAB3GAP1Q15042 981 aa10.49□□□□□ -0.73
SREK1-215ENST00000524111 LARP1Q6PKG0 1096 aaKnown RBP10.49□□□□□ -0.73
SREK1-215ENST00000524111 ANKRD13DQ6ZTN6 518 aa10.49□□□□□ -0.73
SREK1-215ENST00000524111 ARHGEF25Q86VW2 580 aa10.49□□□□□ -0.73
SREK1-215ENST00000524111 IFNL2Q8IZJ0 200 aa10.49□□□□□ -0.73
SREK1-215ENST00000524111 KIF2CQ99661 725 aa10.49□□□□□ -0.73
SREK1-215ENST00000524111 ARID3AQ99856 593 aa10.49□□□□□ -0.73
SREK1-215ENST00000524111 ECHDC1Q9NTX5 307 aa10.49□□□□□ -0.73
SREK1-215ENST00000524111 HYPKQ9NX55 129 aa10.49□□□□□ -0.73
SREK1-215ENST00000524111 SYCE3A1L190 88 aa10.48□□□□□ -0.73
SREK1-215ENST00000524111 GIGYF1O75420 1035 aaPredicted RBP10.48□□□□□ -0.73
SREK1-215ENST00000524111 DNTTIP2Q5QJE6 756 aaKnown RBP10.48□□□□□ -0.73
SREK1-215ENST00000524111 ZNF790Q6PG37 636 aa10.48□□□□□ -0.73
SREK1-215ENST00000524111 RAB11FIP3O75154 756 aa10.48□□□□□ -0.73
SREK1-215ENST00000524111 MSNP26038 577 aaKnown RBP10.48□□□□□ -0.73
SREK1-215ENST00000524111 NECAB1Q8N987 351 aa10.48□□□□□ -0.73
SREK1-215ENST00000524111 DLC1Q96QB1 1528 aa10.48□□□□□ -0.73
SREK1-215ENST00000524111 CRB1P82279 1406 aa10.48□□□□□ -0.73
SREK1-215ENST00000524111 SUCLG2Q96I99 432 aa10.48□□□□□ -0.73
SREK1-215ENST00000524111 SNRKQ9NRH2 765 aa10.48□□□□□ -0.73
SREK1-215ENST00000524111 GPTP24298 496 aa10.47□□□□□ -0.73
SREK1-215ENST00000524111 PTMSP20962 102 aa10.47□□□□□ -0.73
SREK1-215ENST00000524111 FKBP4Q02790 459 aaKnown RBP eCLIP10.47□□□□□ -0.73
SREK1-215ENST00000524111 CEBPZQ03701 1054 aaKnown RBP10.47□□□□□ -0.73
SREK1-215ENST00000524111 WASHC4Q2M389 1173 aa10.47□□□□□ -0.73
SREK1-215ENST00000524111 BEND3Q5T5X7 828 aa10.47□□□□□ -0.73
SREK1-215ENST00000524111 DDX46Q7L014 1031 aaKnown RBP10.47□□□□□ -0.73
SREK1-215ENST00000524111 ERC1Q8IUD2 1116 aa10.47□□□□□ -0.73
SREK1-215ENST00000524111 LINS1Q8NG48 757 aa10.47□□□□□ -0.73
SREK1-215ENST00000524111 LRRC2Q9BYS8 371 aa10.46□□□□□ -0.73
SREK1-215ENST00000524111 ADGRB2O60241 1585 aa10.46□□□□□ -0.73
SREK1-215ENST00000524111 FMNL2Q96PY5 1086 aa10.46□□□□□ -0.74
SREK1-215ENST00000524111 CWC22Q9HCG8 908 aaKnown RBP10.46□□□□□ -0.74
SREK1-215ENST00000524111 PDRG1Q9NUG6 133 aa10.46□□□□□ -0.74
SREK1-215ENST00000524111 CYP46A1Q9Y6A2 500 aa10.46□□□□□ -0.74
SREK1-215ENST00000524111 USP31Q70CQ4 1352 aa10.46□□□□□ -0.74
SREK1-215ENST00000524111 CEP170BQ9Y4F5 1589 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms