RNA–Protein interactions for RNA: ENST00000524084.5

CCDC25-211, Transcript of coiled-coil domain containing 25, humanhuman

TSL 3

Gene CCDC25, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-211ENST00000524084 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
CCDC25-211ENST00000524084 NPC1L1Q9UHC9 1359 aa17.61■□□□□ 0.41
CCDC25-211ENST00000524084 KCPQ6ZWJ8 1503 aa17.61■□□□□ 0.41
CCDC25-211ENST00000524084 ADAMTS7Q9UKP4 1686 aa17.61■□□□□ 0.41
CCDC25-211ENST00000524084 STARD3NLO95772 234 aa17.6■□□□□ 0.41
CCDC25-211ENST00000524084 IFFO2Q5TF58 517 aa17.6■□□□□ 0.41
CCDC25-211ENST00000524084 KDM2BQ8NHM5 1336 aa17.6■□□□□ 0.41
CCDC25-211ENST00000524084 CHRNA5P30532 468 aa17.59■□□□□ 0.41
CCDC25-211ENST00000524084 C16orf71Q8IYS4 520 aaPredicted RBP17.59■□□□□ 0.41
CCDC25-211ENST00000524084 NMRK2Q9NPI5 230 aa17.59■□□□□ 0.41
CCDC25-211ENST00000524084 A0A087WZG4 1122 aa17.58■□□□□ 0.4
CCDC25-211ENST00000524084 NFIXQ14938 502 aa17.58■□□□□ 0.4
CCDC25-211ENST00000524084 GAS2L2Q8NHY3 880 aa17.58■□□□□ 0.4
CCDC25-211ENST00000524084 RBM46Q8TBY0 533 aaKnown RBP17.58■□□□□ 0.4
CCDC25-211ENST00000524084 TEX13AQ9BXU3 409 aaPredicted RBP17.58■□□□□ 0.4
CCDC25-211ENST00000524084 RNF181Q9P0P0 153 aa17.58■□□□□ 0.4
CCDC25-211ENST00000524084 ZBTB1Q9Y2K1 713 aa17.58■□□□□ 0.4
CCDC25-211ENST00000524084 ZC3H4Q9UPT8 1303 aaKnown RBP17.57■□□□□ 0.4
CCDC25-211ENST00000524084 TEFQ10587 303 aa17.57■□□□□ 0.4
CCDC25-211ENST00000524084 GNAT3A8MTJ3 354 aa17.56■□□□□ 0.4
CCDC25-211ENST00000524084 U2SURPO15042 1029 aaKnown RBP17.56■□□□□ 0.4
CCDC25-211ENST00000524084 SERPINB2P05120 415 aa17.55■□□□□ 0.4
CCDC25-211ENST00000524084 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
CCDC25-211ENST00000524084 FSTL1Q12841 308 aa17.55■□□□□ 0.4
CCDC25-211ENST00000524084 UBR2Q8IWV8 1755 aa17.55■□□□□ 0.4
CCDC25-211ENST00000524084 EIF5P55010 431 aaKnown RBP17.54■□□□□ 0.4
CCDC25-211ENST00000524084 ZNF790Q6PG37 636 aa17.54■□□□□ 0.4
CCDC25-211ENST00000524084 TTLL6Q8N841 843 aa17.54■□□□□ 0.4
CCDC25-211ENST00000524084 BCL2L12Q9HB09 334 aa17.54■□□□□ 0.4
CCDC25-211ENST00000524084 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
CCDC25-211ENST00000524084 COL3A1P02461 1466 aaPredicted RBP17.54■□□□□ 0.4
CCDC25-211ENST00000524084 NRXN2Q9P2S2 1712 aa17.53■□□□□ 0.4
CCDC25-211ENST00000524084 H0YIN7 160 aa17.53■□□□□ 0.4
CCDC25-211ENST00000524084 NPM2Q86SE8 214 aaKnown RBP17.53■□□□□ 0.4
CCDC25-211ENST00000524084 VIRMAQ69YN4 1812 aaKnown RBP17.53■□□□□ 0.4
CCDC25-211ENST00000524084 HEG1Q9ULI3 1381 aa17.53■□□□□ 0.4
CCDC25-211ENST00000524084 LMNB1P20700 586 aa17.52■□□□□ 0.4
CCDC25-211ENST00000524084 IL17REQ8NFR9 667 aa17.52■□□□□ 0.4
CCDC25-211ENST00000524084 ZNF496Q96IT1 587 aaPredicted RBP17.52■□□□□ 0.4
CCDC25-211ENST00000524084 CFAP53Q96M91 514 aa17.52■□□□□ 0.4
CCDC25-211ENST00000524084 C2CD5Q86YS7 1000 aa17.51■□□□□ 0.39
CCDC25-211ENST00000524084 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
CCDC25-211ENST00000524084 AFDNP55196 1824 aaKnown RBP17.5■□□□□ 0.39
CCDC25-211ENST00000524084 IL6STP40189 918 aaPredicted RBP17.5■□□□□ 0.39
CCDC25-211ENST00000524084 DNAJC5GQ8N7S2 189 aa17.5■□□□□ 0.39
CCDC25-211ENST00000524084 CEMIPQ8WUJ3 1361 aa17.5■□□□□ 0.39
CCDC25-211ENST00000524084 TNRC6CQ9HCJ0 1690 aaKnown RBP17.49■□□□□ 0.39
CCDC25-211ENST00000524084 DLEC1Q9Y238 1755 aa17.49■□□□□ 0.39
CCDC25-211ENST00000524084 PDE6BP35913 854 aa17.49■□□□□ 0.39
CCDC25-211ENST00000524084 BICDL1Q6ZP65 573 aa17.49■□□□□ 0.39
CCDC25-211ENST00000524084 BRIP1Q9BX63 1249 aa17.49■□□□□ 0.39
CCDC25-211ENST00000524084 RRAGCQ9HB90 399 aa17.49■□□□□ 0.39
CCDC25-211ENST00000524084 NUDCQ9Y266 331 aa17.49■□□□□ 0.39
CCDC25-211ENST00000524084 CARMIL3Q8ND23 1372 aa17.49■□□□□ 0.39
CCDC25-211ENST00000524084 RASSF7Q02833 373 aa17.48■□□□□ 0.39
CCDC25-211ENST00000524084 CNGB1Q14028 1251 aaPredicted RBP17.48■□□□□ 0.39
CCDC25-211ENST00000524084 GLTPD2A6NH11 291 aa17.47■□□□□ 0.39
CCDC25-211ENST00000524084 TBC1D9BQ66K14 1250 aa17.47■□□□□ 0.39
CCDC25-211ENST00000524084 SMC1BQ8NDV3 1235 aa17.47■□□□□ 0.39
CCDC25-211ENST00000524084 ZNF330Q9Y3S2 320 aaPredicted RBP17.47■□□□□ 0.39
CCDC25-211ENST00000524084 SBF1O95248 1867 aa17.47■□□□□ 0.39
CCDC25-211ENST00000524084 BTBD11A6QL63 1104 aa17.46■□□□□ 0.39
CCDC25-211ENST00000524084 VEGFAP15692 232 aaPredicted RBP17.46■□□□□ 0.39
CCDC25-211ENST00000524084 PRKAR2BP31323 418 aa17.46■□□□□ 0.39
CCDC25-211ENST00000524084 SETDB2Q96T68 719 aa17.46■□□□□ 0.39
CCDC25-211ENST00000524084 TBC1D2BQ9UPU7 963 aa17.46■□□□□ 0.39
CCDC25-211ENST00000524084 SIPA1L3O60292 1781 aaPredicted RBP17.45■□□□□ 0.38
CCDC25-211ENST00000524084 SCN7AQ01118 1682 aa17.45■□□□□ 0.38
CCDC25-211ENST00000524084 WDR90Q96KV7 1748 aa17.45■□□□□ 0.38
CCDC25-211ENST00000524084 NPHP1O15259 732 aa17.45■□□□□ 0.38
CCDC25-211ENST00000524084 ZNF622Q969S3 477 aaKnown RBP eCLIP17.45■□□□□ 0.383e-6■■■■□ 21.3
CCDC25-211ENST00000524084 RSPH6AQ9H0K4 717 aa17.45■□□□□ 0.38
CCDC25-211ENST00000524084 PRR5LQ6MZQ0 368 aa17.44■□□□□ 0.38
CCDC25-211ENST00000524084 CNBD1Q8NA66 436 aa17.44■□□□□ 0.38
CCDC25-211ENST00000524084 RTF1Q92541 710 aaKnown RBP17.44■□□□□ 0.38
CCDC25-211ENST00000524084 PHACTR3Q96KR7 559 aa17.44■□□□□ 0.38
CCDC25-211ENST00000524084 NFKBIEO00221 500 aa17.43■□□□□ 0.38
CCDC25-211ENST00000524084 CAMTA2O94983 1202 aa17.43■□□□□ 0.38
CCDC25-211ENST00000524084 A1BGP04217 495 aa17.43■□□□□ 0.38
CCDC25-211ENST00000524084 ST5P78524 1137 aa17.43■□□□□ 0.38
CCDC25-211ENST00000524084 DPY19L2Q6NUT2 758 aa17.43■□□□□ 0.38
CCDC25-211ENST00000524084 KLRG1Q96E93 195 aa17.43■□□□□ 0.38
CCDC25-211ENST00000524084 U2AF1L5P0DN76 240 aaPredicted RBP17.42■□□□□ 0.38
CCDC25-211ENST00000524084 U2AF1Q01081 240 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCDC25-211ENST00000524084 SOGA3Q5TF21 947 aa17.42■□□□□ 0.38
CCDC25-211ENST00000524084 CLEC4GQ6UXB4 293 aa17.42■□□□□ 0.38
CCDC25-211ENST00000524084 DZIP3Q86Y13 1208 aaKnown RBP17.42■□□□□ 0.38
CCDC25-211ENST00000524084 CNKSR1Q969H4 720 aa17.42■□□□□ 0.38
CCDC25-211ENST00000524084 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
CCDC25-211ENST00000524084 C21orf2O43822 256 aa17.41■□□□□ 0.38
CCDC25-211ENST00000524084 SNRPA1P09661 255 aaKnown RBP17.41■□□□□ 0.38
CCDC25-211ENST00000524084 PRELPP51888 382 aa17.41■□□□□ 0.38
CCDC25-211ENST00000524084 STYK1Q6J9G0 422 aa17.41■□□□□ 0.38
CCDC25-211ENST00000524084 LTBP3Q9NS15 1303 aa17.41■□□□□ 0.38
CCDC25-211ENST00000524084 RGL2O15211 777 aa17.4■□□□□ 0.38
CCDC25-211ENST00000524084 HTATSF1O43719 755 aaKnown RBP17.4■□□□□ 0.38
CCDC25-211ENST00000524084 JMYQ8N9B5 988 aa17.4■□□□□ 0.38
CCDC25-211ENST00000524084 TIAM2Q8IVF5 1701 aa17.39■□□□□ 0.37
CCDC25-211ENST00000524084 KCNQ3O43525 872 aa17.39■□□□□ 0.37
CCDC25-211ENST00000524084 SRGNP10124 158 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms