RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 ZCCHC2Q9C0B9 1178 aaKnown RBP6.75□□□□□ -1.33
LINCR-0001-203ENST00000524047 ALG2Q9H553 416 aa6.75□□□□□ -1.33
LINCR-0001-203ENST00000524047 MKL2Q9ULH7 1088 aa6.75□□□□□ -1.33
LINCR-0001-203ENST00000524047 IQSEC3Q9UPP2 1182 aaPredicted RBP6.75□□□□□ -1.33
LINCR-0001-203ENST00000524047 PCDHGA11Q9Y5H2 935 aa6.75□□□□□ -1.33
LINCR-0001-203ENST00000524047 A6NJY4 79 aa6.74□□□□□ -1.33
LINCR-0001-203ENST00000524047 MSTNO14793 375 aa6.74□□□□□ -1.33
LINCR-0001-203ENST00000524047 NBPF1Q3BBV0 1214 aa6.74□□□□□ -1.33
LINCR-0001-203ENST00000524047 ALYREFQ86V81 257 aaKnown RBP6.74□□□□□ -1.33
LINCR-0001-203ENST00000524047 NFATC2IPQ8NCF5 419 aa6.74□□□□□ -1.33
LINCR-0001-203ENST00000524047 AIDAQ96BJ3 306 aa6.74□□□□□ -1.33
LINCR-0001-203ENST00000524047 SERTAD1Q9UHV2 236 aa6.74□□□□□ -1.33
LINCR-0001-203ENST00000524047 GGA1Q9UJY5 639 aa6.74□□□□□ -1.33
LINCR-0001-203ENST00000524047 PIK3CDO00329 1044 aa6.73□□□□□ -1.33
LINCR-0001-203ENST00000524047 ARAFP10398 606 aa6.73□□□□□ -1.33
LINCR-0001-203ENST00000524047 EML3Q32P44 896 aa6.73□□□□□ -1.33
LINCR-0001-203ENST00000524047 FAM182BQ5T319 152 aa6.73□□□□□ -1.33
LINCR-0001-203ENST00000524047 WWC1Q8IX03 1113 aa6.73□□□□□ -1.33
LINCR-0001-203ENST00000524047 SPOCK3Q9BQ16 436 aa6.73□□□□□ -1.33
LINCR-0001-203ENST00000524047 ZDHHC3Q9NYG2 299 aa6.73□□□□□ -1.33
LINCR-0001-203ENST00000524047 A0A1W2PNR3 127 aa6.72□□□□□ -1.33
LINCR-0001-203ENST00000524047 BACH1O14867 736 aa6.72□□□□□ -1.33
LINCR-0001-203ENST00000524047 ATXN7O15265 892 aaPredicted RBP6.72□□□□□ -1.33
LINCR-0001-203ENST00000524047 EPXP11678 715 aa6.72□□□□□ -1.33
LINCR-0001-203ENST00000524047 HOXB4P17483 251 aaPredicted RBP6.72□□□□□ -1.33
LINCR-0001-203ENST00000524047 NOD1Q9Y239 953 aa6.72□□□□□ -1.33
LINCR-0001-203ENST00000524047 PROCP04070 461 aa6.71□□□□□ -1.34
LINCR-0001-203ENST00000524047 SKIP12755 728 aa6.71□□□□□ -1.34
LINCR-0001-203ENST00000524047 TATP17735 454 aaPredicted RBP6.71□□□□□ -1.34
LINCR-0001-203ENST00000524047 TNP2Q05952 138 aa6.71□□□□□ -1.34
LINCR-0001-203ENST00000524047 ARSJQ5FYB0 599 aaPredicted RBP6.71□□□□□ -1.34
LINCR-0001-203ENST00000524047 LINC00114Q6XXX2 140 aa6.71□□□□□ -1.34
LINCR-0001-203ENST00000524047 RRAGCQ9HB90 399 aa6.71□□□□□ -1.34
LINCR-0001-203ENST00000524047 AVENQ9NQS1 362 aaPredicted RBP6.71□□□□□ -1.34
LINCR-0001-203ENST00000524047 PIK3R2O00459 728 aa6.7□□□□□ -1.34
LINCR-0001-203ENST00000524047 MAPTP10636 758 aaKnown RBP6.7□□□□□ -1.34
LINCR-0001-203ENST00000524047 AMPD1P23109 780 aa6.7□□□□□ -1.34
LINCR-0001-203ENST00000524047 GTF2IP78347 998 aa6.7□□□□□ -1.34
LINCR-0001-203ENST00000524047 SAMD5Q5TGI4 173 aa6.7□□□□□ -1.34
LINCR-0001-203ENST00000524047 BTBD6Q96KE9 485 aa6.7□□□□□ -1.34
LINCR-0001-203ENST00000524047 ZIC5Q96T25 663 aa6.7□□□□□ -1.34
LINCR-0001-203ENST00000524047 CABP1Q9NZU7 370 aa6.7□□□□□ -1.34
LINCR-0001-203ENST00000524047 SCHIP1Q9P0W5 487 aaPredicted RBP6.7□□□□□ -1.34
LINCR-0001-203ENST00000524047 HCN2Q9UL51 889 aa6.7□□□□□ -1.34
LINCR-0001-203ENST00000524047 USP3Q9Y6I4 520 aa6.7□□□□□ -1.34
LINCR-0001-203ENST00000524047 KRBA1A5PL33 1030 aa6.69□□□□□ -1.34
LINCR-0001-203ENST00000524047 NEURL1BA8MQ27 555 aa6.69□□□□□ -1.34
LINCR-0001-203ENST00000524047 FAM157BP0CG42 384 aa6.69□□□□□ -1.34
LINCR-0001-203ENST00000524047 COL8A1P27658 744 aa6.69□□□□□ -1.34
LINCR-0001-203ENST00000524047 NCOA4Q13772 614 aa6.69□□□□□ -1.34
LINCR-0001-203ENST00000524047 DCDC2BA2VCK2 349 aa6.68□□□□□ -1.34
LINCR-0001-203ENST00000524047 GNB5O14775 395 aa6.68□□□□□ -1.34
LINCR-0001-203ENST00000524047 ADH6P28332 368 aa6.68□□□□□ -1.34
LINCR-0001-203ENST00000524047 DGKGP49619 791 aa6.68□□□□□ -1.34
LINCR-0001-203ENST00000524047 EPHA4P54764 986 aa6.68□□□□□ -1.34
LINCR-0001-203ENST00000524047 CLUAP1Q96AJ1 413 aa6.68□□□□□ -1.34
LINCR-0001-203ENST00000524047 ZNF358Q9NW07 568 aa6.68□□□□□ -1.34
LINCR-0001-203ENST00000524047 USP17L5A8MUK1 530 aa6.67□□□□□ -1.34
LINCR-0001-203ENST00000524047 KHNYNO15037 678 aaKnown RBP6.67□□□□□ -1.34
LINCR-0001-203ENST00000524047 ADAM23O75077 832 aa6.67□□□□□ -1.34
LINCR-0001-203ENST00000524047 CD33P20138 364 aa6.67□□□□□ -1.34
LINCR-0001-203ENST00000524047 LAMC2Q13753 1193 aa6.67□□□□□ -1.34
LINCR-0001-203ENST00000524047 TEAD4Q15561 434 aa6.67□□□□□ -1.34
LINCR-0001-203ENST00000524047 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.67□□□□□ -1.34
LINCR-0001-203ENST00000524047 ZDHHC1Q8WTX9 485 aa6.67□□□□□ -1.34
LINCR-0001-203ENST00000524047 KLF15Q9UIH9 416 aa6.67□□□□□ -1.34
LINCR-0001-203ENST00000524047 GJA3Q9Y6H8 435 aa6.67□□□□□ -1.34
LINCR-0001-203ENST00000524047 POM121CA8CG34 1229 aa6.66□□□□□ -1.34
LINCR-0001-203ENST00000524047 EFSO43281 561 aa6.66□□□□□ -1.34
LINCR-0001-203ENST00000524047 PSME1Q06323 249 aa6.66□□□□□ -1.34
LINCR-0001-203ENST00000524047 ZNF468Q5VIY5 522 aaPredicted RBP6.66□□□□□ -1.34
LINCR-0001-203ENST00000524047 BICDL1Q6ZP65 573 aa6.66□□□□□ -1.34
LINCR-0001-203ENST00000524047 TRIM50Q86XT4 487 aa6.66□□□□□ -1.34
LINCR-0001-203ENST00000524047 L3MBTL2Q969R5 705 aa6.66□□□□□ -1.34
LINCR-0001-203ENST00000524047 MARK1Q9P0L2 795 aa6.66□□□□□ -1.34
LINCR-0001-203ENST00000524047 GPC6Q9Y625 555 aaPredicted RBP6.66□□□□□ -1.34
LINCR-0001-203ENST00000524047 PARP3Q9Y6F1 533 aa6.66□□□□□ -1.34
LINCR-0001-203ENST00000524047 EML1O00423 815 aa6.65□□□□□ -1.34
LINCR-0001-203ENST00000524047 NOS2P35228 1153 aa6.65□□□□□ -1.34
LINCR-0001-203ENST00000524047 TXLNAP40222 546 aa6.65□□□□□ -1.34
LINCR-0001-203ENST00000524047 CHSY3Q70JA7 882 aa6.65□□□□□ -1.34
LINCR-0001-203ENST00000524047 FCHSD1Q86WN1 690 aa6.65□□□□□ -1.34
LINCR-0001-203ENST00000524047 PLEKHM2Q8IWE5 1019 aa6.65□□□□□ -1.34
LINCR-0001-203ENST00000524047 SUV39H2Q9H5I1 410 aa6.65□□□□□ -1.34
LINCR-0001-203ENST00000524047 GRIN2CQ14957 1233 aa6.64□□□□□ -1.35
LINCR-0001-203ENST00000524047 PROSER2Q86WR7 435 aaPredicted RBP6.64□□□□□ -1.35
LINCR-0001-203ENST00000524047 SLC9A9Q8IVB4 645 aa6.64□□□□□ -1.35
LINCR-0001-203ENST00000524047 DEPDC4Q8N2C3 294 aa6.64□□□□□ -1.35
LINCR-0001-203ENST00000524047 ADAMTS19Q8TE59 1207 aa6.64□□□□□ -1.35
LINCR-0001-203ENST00000524047 C7orf43Q8WVR3 580 aa6.64□□□□□ -1.35
LINCR-0001-203ENST00000524047 NOP53Q9NZM5 478 aaKnown RBP6.64□□□□□ -1.35
LINCR-0001-203ENST00000524047 PRR12Q9ULL5 1215 aa6.64□□□□□ -1.35
LINCR-0001-203ENST00000524047 ZBTB7BO15156 539 aaPredicted RBP6.63□□□□□ -1.35
LINCR-0001-203ENST00000524047 BAG6P46379 1132 aa6.63□□□□□ -1.35
LINCR-0001-203ENST00000524047 ATP1A2P50993 1020 aa6.63□□□□□ -1.35
LINCR-0001-203ENST00000524047 TNS4Q8IZW8 715 aa6.63□□□□□ -1.35
LINCR-0001-203ENST00000524047 STRN4Q9NRL3 753 aa6.63□□□□□ -1.35
LINCR-0001-203ENST00000524047 SERTM1A2A2V5 107 aa6.62□□□□□ -1.35
LINCR-0001-203ENST00000524047 USP17L3A6NCW0 530 aa6.62□□□□□ -1.35
LINCR-0001-203ENST00000524047 USP17L4A6NCW7 530 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms