RNA–Protein interactions for RNA: ENST00000523147.5

PTP4A3-205, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5

Gene PTP4A3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-205ENST00000523147 FKBP8Q14318 412 aa27.84■■■□□ 2.05
PTP4A3-205ENST00000523147 PNNQ9H307 717 aaKnown RBP27.84■■■□□ 2.05
PTP4A3-205ENST00000523147 HEG1Q9ULI3 1381 aa27.84■■■□□ 2.05
PTP4A3-205ENST00000523147 HTATSF1O43719 755 aaKnown RBP27.83■■■□□ 2.05
PTP4A3-205ENST00000523147 USPL1Q5W0Q7 1092 aa27.83■■■□□ 2.05
PTP4A3-205ENST00000523147 COL15A1P39059 1388 aa27.82■■■□□ 2.04
PTP4A3-205ENST00000523147 TGFB2P61812 414 aa27.81■■■□□ 2.04
PTP4A3-205ENST00000523147 ZNF784Q8NCA9 323 aaPredicted RBP27.81■■■□□ 2.04
PTP4A3-205ENST00000523147 DCTN1Q14203 1278 aa27.8■■■□□ 2.04
PTP4A3-205ENST00000523147 NARFQ9UHQ1 456 aa27.8■■■□□ 2.04
PTP4A3-205ENST00000523147 NPM2Q86SE8 214 aaKnown RBP27.79■■■□□ 2.04
PTP4A3-205ENST00000523147 MAPK8IP3Q9UPT6 1336 aa27.78■■■□□ 2.04
PTP4A3-205ENST00000523147 KCNQ3O43525 872 aa27.78■■■□□ 2.04
PTP4A3-205ENST00000523147 ZNF330Q9Y3S2 320 aaPredicted RBP27.78■■■□□ 2.04
PTP4A3-205ENST00000523147 C10orf71Q711Q0 1435 aa27.77■■■□□ 2.04
PTP4A3-205ENST00000523147 A0A087WZG4 1122 aa27.77■■■□□ 2.04
PTP4A3-205ENST00000523147 A0A0G2JLW4 131 aa27.76■■■□□ 2.03
PTP4A3-205ENST00000523147 DDR1Q08345 913 aa27.75■■■□□ 2.03
PTP4A3-205ENST00000523147 TAF7Q15545 349 aaPredicted RBP27.75■■■□□ 2.03
PTP4A3-205ENST00000523147 PLEKHF1Q96S99 279 aa27.75■■■□□ 2.03
PTP4A3-205ENST00000523147 KIF13BQ9NQT8 1826 aa27.75■■■□□ 2.03
PTP4A3-205ENST00000523147 PXDNLA1KZ92 1463 aa27.75■■■□□ 2.03
PTP4A3-205ENST00000523147 TM4SF1P30408 202 aa27.74■■■□□ 2.03
PTP4A3-205ENST00000523147 EIF5P55010 431 aaKnown RBP27.74■■■□□ 2.03
PTP4A3-205ENST00000523147 MYBBP1AQ9BQG0 1328 aaKnown RBP27.73■■■□□ 2.03
PTP4A3-205ENST00000523147 NFE2L2Q16236 605 aa27.73■■■□□ 2.03
PTP4A3-205ENST00000523147 N4BP2Q86UW6 1770 aaPredicted RBP27.73■■■□□ 2.03
PTP4A3-205ENST00000523147 POLRMTO00411 1230 aaKnown RBP27.72■■■□□ 2.03
PTP4A3-205ENST00000523147 A1BGP04217 495 aa27.72■■■□□ 2.03
PTP4A3-205ENST00000523147 DPEP1P16444 411 aa27.72■■■□□ 2.03
PTP4A3-205ENST00000523147 IL6STP40189 918 aaPredicted RBP27.72■■■□□ 2.03
PTP4A3-205ENST00000523147 BCS1LQ9Y276 419 aa27.72■■■□□ 2.03
PTP4A3-205ENST00000523147 SNRPA1P09661 255 aaKnown RBP27.71■■■□□ 2.03
PTP4A3-205ENST00000523147 NFIXQ14938 502 aa27.71■■■□□ 2.03
PTP4A3-205ENST00000523147 USP16Q9Y5T5 823 aa27.7■■■□□ 2.02
PTP4A3-205ENST00000523147 ZEB1P37275 1124 aaPredicted RBP27.69■■■□□ 2.02
PTP4A3-205ENST00000523147 PNISRQ8TF01 805 aaKnown RBP27.69■■■□□ 2.02
PTP4A3-205ENST00000523147 BCL2L12Q9HB09 334 aa27.69■■■□□ 2.02
PTP4A3-205ENST00000523147 MIS18AQ9NYP9 233 aa27.69■■■□□ 2.02
PTP4A3-205ENST00000523147 TBC1D2BQ9UPU7 963 aa27.69■■■□□ 2.02
PTP4A3-205ENST00000523147 BICDL1Q6ZP65 573 aa27.68■■■□□ 2.02
PTP4A3-205ENST00000523147 DLG5Q8TDM6 1919 aa27.68■■■□□ 2.02
PTP4A3-205ENST00000523147 KIAA1551Q9HCM1 1747 aa27.67■■■□□ 2.02
PTP4A3-205ENST00000523147 PRAMEF22A3QJZ6 481 aa27.66■■■□□ 2.02
PTP4A3-205ENST00000523147 SERPINB2P05120 415 aa27.66■■■□□ 2.02
PTP4A3-205ENST00000523147 PIM2Q9P1W9 311 aa27.66■■■□□ 2.02
PTP4A3-205ENST00000523147 WDR43Q15061 677 aaKnown RBP eCLIP27.64■■■□□ 2.02
PTP4A3-205ENST00000523147 THUMPD2Q9BTF0 503 aaKnown RBP27.64■■■□□ 2.02
PTP4A3-205ENST00000523147 PIP4K2AP48426 406 aaPredicted RBP27.63■■■□□ 2.01
PTP4A3-205ENST00000523147 RIPK4P57078 832 aa27.63■■■□□ 2.01
PTP4A3-205ENST00000523147 DZIP3Q86Y13 1208 aaKnown RBP27.63■■■□□ 2.01
PTP4A3-205ENST00000523147 KCNA3P22001 575 aa27.62■■■□□ 2.01
PTP4A3-205ENST00000523147 CHRNA5P30532 468 aa27.62■■■□□ 2.01
PTP4A3-205ENST00000523147 ARHGAP27Q6ZUM4 889 aa27.62■■■□□ 2.01
PTP4A3-205ENST00000523147 DALRD3Q5D0E6 543 aaKnown RBP27.61■■■□□ 2.01
PTP4A3-205ENST00000523147 TBC1D9BQ66K14 1250 aa27.61■■■□□ 2.01
PTP4A3-205ENST00000523147 AFDNP55196 1824 aaKnown RBP27.6■■■□□ 2.01
PTP4A3-205ENST00000523147 NPHP1O15259 732 aa27.59■■■□□ 2.01
PTP4A3-205ENST00000523147 LMOD3Q0VAK6 560 aa27.59■■■□□ 2.01
PTP4A3-205ENST00000523147 SETDB2Q96T68 719 aa27.59■■■□□ 2.01
PTP4A3-205ENST00000523147 PRKRIP1Q9H875 184 aaPredicted RBP27.59■■■□□ 2.01
PTP4A3-205ENST00000523147 CAMTA2O94983 1202 aa27.58■■■□□ 2.01
PTP4A3-205ENST00000523147 CCDC146Q8IYE0 955 aa27.58■■■□□ 2.01
PTP4A3-205ENST00000523147 SCN7AQ01118 1682 aa27.58■■■□□ 2.01
PTP4A3-205ENST00000523147 ATP10DQ9P241 1426 aa27.58■■■□□ 2
PTP4A3-205ENST00000523147 GIGYF1O75420 1035 aaPredicted RBP27.57■■■□□ 2
PTP4A3-205ENST00000523147 TMPOP42166 694 aaKnown RBP27.57■■■□□ 2
PTP4A3-205ENST00000523147 ZNF652Q9Y2D9 606 aa27.57■■■□□ 2
PTP4A3-205ENST00000523147 CARMIL3Q8ND23 1372 aa27.57■■■□□ 2
PTP4A3-205ENST00000523147 BRCA1P38398 1863 aaKnown RBP27.57■■■□□ 2
PTP4A3-205ENST00000523147 NRXN2Q9P2S2 1712 aa27.55■■■□□ 2
PTP4A3-205ENST00000523147 EIF4A1P60842 406 aaKnown RBP27.55■■■□□ 2
PTP4A3-205ENST00000523147 NEUROD2Q15784 382 aa27.55■■■□□ 2
PTP4A3-205ENST00000523147 TSPYL4Q9UJ04 414 aa27.55■■■□□ 2
PTP4A3-205ENST00000523147 KDM3BQ7LBC6 1761 aa27.55■■■□□ 2
PTP4A3-205ENST00000523147 NBPF26B4DH59 902 aa27.54■■■□□ 2
PTP4A3-205ENST00000523147 H0YIN7 160 aa27.54■■■□□ 2
PTP4A3-205ENST00000523147 NBPF10Q6P3W6 841 aaKnown RBP27.54■■■□□ 2
PTP4A3-205ENST00000523147 C2CD5Q86YS7 1000 aa27.54■■■□□ 2
PTP4A3-205ENST00000523147 NBPF15Q8N660 670 aa27.54■■■□□ 2
PTP4A3-205ENST00000523147 ZNF526Q8TF50 670 aaPredicted RBP27.54■■■□□ 2
PTP4A3-205ENST00000523147 RUNDC1Q96C34 613 aa27.54■■■□□ 2
PTP4A3-205ENST00000523147 GPBP1L1Q9HC44 474 aaPredicted RBP27.54■■■□□ 2
PTP4A3-205ENST00000523147 RRP7AQ9Y3A4 280 aaKnown RBP27.54■■■□□ 2
PTP4A3-205ENST00000523147 CLEC4GQ6UXB4 293 aa27.52■■■□□ 2
PTP4A3-205ENST00000523147 ADAMTS8Q9UP79 889 aa27.52■■■□□ 2
PTP4A3-205ENST00000523147 ADCY9O60503 1353 aa27.51■■□□□ 1.99
PTP4A3-205ENST00000523147 ARFGEF1Q9Y6D6 1849 aa27.51■■□□□ 1.99
PTP4A3-205ENST00000523147 LAMB4A4D0S4 1761 aa27.51■■□□□ 1.99
PTP4A3-205ENST00000523147 PDE6BP35913 854 aa27.51■■□□□ 1.99
PTP4A3-205ENST00000523147 PRR5LQ6MZQ0 368 aa27.51■■□□□ 1.99
PTP4A3-205ENST00000523147 NGEFQ8N5V2 710 aa27.51■■□□□ 1.99
PTP4A3-205ENST00000523147 CNBD1Q8NA66 436 aa27.51■■□□□ 1.99
PTP4A3-205ENST00000523147 ST5P78524 1137 aa27.5■■□□□ 1.99
PTP4A3-205ENST00000523147 CCDC24Q8N4L8 307 aa27.5■■□□□ 1.99
PTP4A3-205ENST00000523147 BRIP1Q9BX63 1249 aa27.5■■□□□ 1.99
PTP4A3-205ENST00000523147 BCORQ6W2J9 1755 aa27.5■■□□□ 1.99
PTP4A3-205ENST00000523147 C1QTNF8P60827 252 aa27.49■■□□□ 1.99
PTP4A3-205ENST00000523147 TTLL6Q8N841 843 aa27.49■■□□□ 1.99
PTP4A3-205ENST00000523147 PDZRN3Q9UPQ7 1066 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms