RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 HEG1Q9ULI3 1381 aa14.49□□□□□ -0.09
PVT1-216ENST00000523068 BRCA1P38398 1863 aaKnown RBP14.49□□□□□ -0.09
PVT1-216ENST00000523068 BTBD11A6QL63 1104 aa14.49□□□□□ -0.09
PVT1-216ENST00000523068 HTATSF1O43719 755 aaKnown RBP14.49□□□□□ -0.09
PVT1-216ENST00000523068 ZNF496Q96IT1 587 aaPredicted RBP14.49□□□□□ -0.09
PVT1-216ENST00000523068 FMNL2Q96PY5 1086 aa14.49□□□□□ -0.09
PVT1-216ENST00000523068 PNNQ9H307 717 aaKnown RBP14.49□□□□□ -0.09
PVT1-216ENST00000523068 SRP68Q9UHB9 627 aaKnown RBP14.49□□□□□ -0.09
PVT1-216ENST00000523068 ZBTB1Q9Y2K1 713 aa14.49□□□□□ -0.09
PVT1-216ENST00000523068 FKBP8Q14318 412 aa14.48□□□□□ -0.09
PVT1-216ENST00000523068 RALBP1Q15311 655 aa14.48□□□□□ -0.09
PVT1-216ENST00000523068 PXDNLA1KZ92 1463 aa14.48□□□□□ -0.09
PVT1-216ENST00000523068 AFDNP55196 1824 aaKnown RBP14.48□□□□□ -0.09
PVT1-216ENST00000523068 USPL1Q5W0Q7 1092 aa14.47□□□□□ -0.09
PVT1-216ENST00000523068 NARFQ9UHQ1 456 aa14.47□□□□□ -0.09
PVT1-216ENST00000523068 A0A087WZG4 1122 aa14.46□□□□□ -0.09
PVT1-216ENST00000523068 CANXP27824 592 aaKnown RBP14.46□□□□□ -0.09
PVT1-216ENST00000523068 ARFGEF1Q9Y6D6 1849 aa14.45□□□□□ -0.1
PVT1-216ENST00000523068 TM4SF1P30408 202 aa14.45□□□□□ -0.1
PVT1-216ENST00000523068 DDX10Q13206 875 aaKnown RBP14.45□□□□□ -0.1
PVT1-216ENST00000523068 MCM10Q7L590 875 aa14.45□□□□□ -0.1
PVT1-216ENST00000523068 NPM2Q86SE8 214 aaKnown RBP14.45□□□□□ -0.1
PVT1-216ENST00000523068 SCN7AQ01118 1682 aa14.45□□□□□ -0.1
PVT1-216ENST00000523068 NRXN2Q9P2S2 1712 aa14.44□□□□□ -0.1
PVT1-216ENST00000523068 A0A0G2JLW4 131 aa14.44□□□□□ -0.1
PVT1-216ENST00000523068 POLRMTO00411 1230 aaKnown RBP14.44□□□□□ -0.1
PVT1-216ENST00000523068 EIF5P55010 431 aaKnown RBP14.44□□□□□ -0.1
PVT1-216ENST00000523068 DDR1Q08345 913 aa14.44□□□□□ -0.1
PVT1-216ENST00000523068 WWC3Q9ULE0 1092 aa14.44□□□□□ -0.1
PVT1-216ENST00000523068 MAPK8IP3Q9UPT6 1336 aa14.43□□□□□ -0.1
PVT1-216ENST00000523068 IL6STP40189 918 aaPredicted RBP14.43□□□□□ -0.1
PVT1-216ENST00000523068 PLEKHF1Q96S99 279 aa14.43□□□□□ -0.1
PVT1-216ENST00000523068 BCS1LQ9Y276 419 aa14.43□□□□□ -0.1
PVT1-216ENST00000523068 LAMB4A4D0S4 1761 aa14.42□□□□□ -0.1
PVT1-216ENST00000523068 KDM3BQ7LBC6 1761 aa14.42□□□□□ -0.1
PVT1-216ENST00000523068 KCNQ3O43525 872 aa14.42□□□□□ -0.1
PVT1-216ENST00000523068 DPEP1P16444 411 aa14.42□□□□□ -0.1
PVT1-216ENST00000523068 DCTN1Q14203 1278 aa14.42□□□□□ -0.1
PVT1-216ENST00000523068 TAF7Q15545 349 aaPredicted RBP14.42□□□□□ -0.1
PVT1-216ENST00000523068 BCORQ6W2J9 1755 aa14.42□□□□□ -0.1
PVT1-216ENST00000523068 SNRPA1P09661 255 aaKnown RBP14.41□□□□□ -0.1
PVT1-216ENST00000523068 NFIXQ14938 502 aa14.41□□□□□ -0.1
PVT1-216ENST00000523068 NFE2L2Q16236 605 aa14.41□□□□□ -0.1
PVT1-216ENST00000523068 PNISRQ8TF01 805 aaKnown RBP14.41□□□□□ -0.1
PVT1-216ENST00000523068 PIM2Q9P1W9 311 aa14.41□□□□□ -0.1
PVT1-216ENST00000523068 ZNF330Q9Y3S2 320 aaPredicted RBP14.41□□□□□ -0.1
PVT1-216ENST00000523068 DLEC1Q9Y238 1755 aa14.41□□□□□ -0.1
PVT1-216ENST00000523068 MYBBP1AQ9BQG0 1328 aaKnown RBP14.41□□□□□ -0.1
PVT1-216ENST00000523068 BCL2L12Q9HB09 334 aa14.4□□□□□ -0.1
PVT1-216ENST00000523068 A1BGP04217 495 aa14.39□□□□□ -0.11
PVT1-216ENST00000523068 SERPINB2P05120 415 aa14.39□□□□□ -0.11
PVT1-216ENST00000523068 KCNA3P22001 575 aa14.39□□□□□ -0.11
PVT1-216ENST00000523068 USP16Q9Y5T5 823 aa14.39□□□□□ -0.11
PVT1-216ENST00000523068 ATP10DQ9P241 1426 aa14.39□□□□□ -0.11
PVT1-216ENST00000523068 ADCY9O60503 1353 aa14.38□□□□□ -0.11
PVT1-216ENST00000523068 GIGYF1O75420 1035 aaPredicted RBP14.38□□□□□ -0.11
PVT1-216ENST00000523068 DALRD3Q5D0E6 543 aaKnown RBP14.38□□□□□ -0.11
PVT1-216ENST00000523068 TBC1D2BQ9UPU7 963 aa14.38□□□□□ -0.11
PVT1-216ENST00000523068 BICDL1Q6ZP65 573 aa14.37□□□□□ -0.11
PVT1-216ENST00000523068 ARHGAP27Q6ZUM4 889 aa14.37□□□□□ -0.11
PVT1-216ENST00000523068 CARMIL3Q8ND23 1372 aa14.36□□□□□ -0.11
PVT1-216ENST00000523068 PRAMEF22A3QJZ6 481 aa14.36□□□□□ -0.11
PVT1-216ENST00000523068 TBC1D9BQ66K14 1250 aa14.36□□□□□ -0.11
PVT1-216ENST00000523068 DZIP3Q86Y13 1208 aaKnown RBP14.36□□□□□ -0.11
PVT1-216ENST00000523068 MIS18AQ9NYP9 233 aa14.36□□□□□ -0.11
PVT1-216ENST00000523068 ANKRD31Q8N7Z5 1873 aa14.35□□□□□ -0.11
PVT1-216ENST00000523068 CAMTA2O94983 1202 aa14.35□□□□□ -0.11
PVT1-216ENST00000523068 CHRNA5P30532 468 aa14.35□□□□□ -0.11
PVT1-216ENST00000523068 C1QTNF8P60827 252 aa14.35□□□□□ -0.11
PVT1-216ENST00000523068 LMOD3Q0VAK6 560 aa14.35□□□□□ -0.11
PVT1-216ENST00000523068 CLEC4GQ6UXB4 293 aa14.35□□□□□ -0.11
PVT1-216ENST00000523068 SETDB2Q96T68 719 aa14.35□□□□□ -0.11
PVT1-216ENST00000523068 GPBP1L1Q9HC44 474 aaPredicted RBP14.35□□□□□ -0.11
PVT1-216ENST00000523068 PDZRN3Q9UPQ7 1066 aa14.35□□□□□ -0.11
PVT1-216ENST00000523068 ZNF652Q9Y2D9 606 aa14.35□□□□□ -0.11
PVT1-216ENST00000523068 SBF1O95248 1867 aa14.34□□□□□ -0.11
PVT1-216ENST00000523068 H0YIN7 160 aa14.34□□□□□ -0.11
PVT1-216ENST00000523068 RIPK4P57078 832 aa14.34□□□□□ -0.11
PVT1-216ENST00000523068 WDR43Q15061 677 aaKnown RBP eCLIP14.34□□□□□ -0.11
PVT1-216ENST00000523068 RGL2O15211 777 aa14.33□□□□□ -0.12
PVT1-216ENST00000523068 NPHP1O15259 732 aa14.33□□□□□ -0.12
PVT1-216ENST00000523068 PDE6BP35913 854 aa14.33□□□□□ -0.12
PVT1-216ENST00000523068 PIP4K2AP48426 406 aaPredicted RBP14.33□□□□□ -0.12
PVT1-216ENST00000523068 THUMPD2Q9BTF0 503 aaKnown RBP14.33□□□□□ -0.12
PVT1-216ENST00000523068 NUP98P52948 1817 aa14.32□□□□□ -0.12
PVT1-216ENST00000523068 TMPOP42166 694 aaKnown RBP14.32□□□□□ -0.12
PVT1-216ENST00000523068 EIF4A1P60842 406 aaKnown RBP14.32□□□□□ -0.12
PVT1-216ENST00000523068 ST5P78524 1137 aa14.32□□□□□ -0.12
PVT1-216ENST00000523068 C2CD5Q86YS7 1000 aa14.32□□□□□ -0.12
PVT1-216ENST00000523068 TTLL6Q8N841 843 aa14.32□□□□□ -0.12
PVT1-216ENST00000523068 CNBD1Q8NA66 436 aa14.32□□□□□ -0.12
PVT1-216ENST00000523068 BRIP1Q9BX63 1249 aa14.32□□□□□ -0.12
PVT1-216ENST00000523068 PRKRIP1Q9H875 184 aaPredicted RBP14.32□□□□□ -0.12
PVT1-216ENST00000523068 BABAM1Q9NWV8 329 aa14.32□□□□□ -0.12
PVT1-216ENST00000523068 CACNA1SQ13698 1873 aa14.31□□□□□ -0.12
PVT1-216ENST00000523068 NBPF26B4DH59 902 aa14.31□□□□□ -0.12
PVT1-216ENST00000523068 PRR5LQ6MZQ0 368 aa14.31□□□□□ -0.12
PVT1-216ENST00000523068 NBPF10Q6P3W6 841 aaKnown RBP14.31□□□□□ -0.12
PVT1-216ENST00000523068 NBPF15Q8N660 670 aa14.31□□□□□ -0.12
PVT1-216ENST00000523068 ZNF526Q8TF50 670 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms