RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 PANK1Q8TE04 598 aa27.26■■□□□ 1.96
R3HCC1-208ENST00000522012 ARHGAP45Q92619 1136 aa27.26■■□□□ 1.96
R3HCC1-208ENST00000522012 MS4A1P11836 297 aa27.26■■□□□ 1.95
R3HCC1-208ENST00000522012 FTSJ3Q8IY81 847 aaKnown RBP27.25■■□□□ 1.95
R3HCC1-208ENST00000522012 DZIP1LQ8IYY4 767 aaKnown RBP27.25■■□□□ 1.95
R3HCC1-208ENST00000522012 TEX13AQ9BXU3 409 aaPredicted RBP27.25■■□□□ 1.95
R3HCC1-208ENST00000522012 ANXA1P04083 346 aa27.24■■□□□ 1.95
R3HCC1-208ENST00000522012 CRBNQ96SW2 442 aa27.24■■□□□ 1.95
R3HCC1-208ENST00000522012 API5Q9BZZ5 524 aaKnown RBP27.24■■□□□ 1.95
R3HCC1-208ENST00000522012 UBR2Q8IWV8 1755 aa27.24■■□□□ 1.95
R3HCC1-208ENST00000522012 PALLDQ8WX93 1383 aa27.23■■□□□ 1.95
R3HCC1-208ENST00000522012 PTPRCP08575 1304 aa27.23■■□□□ 1.95
R3HCC1-208ENST00000522012 DNAJC10Q8IXB1 793 aa27.23■■□□□ 1.95
R3HCC1-208ENST00000522012 SLC4A9Q96Q91 983 aa27.23■■□□□ 1.95
R3HCC1-208ENST00000522012 DDX21Q9NR30 783 aaKnown RBP eCLIP27.23■■□□□ 1.95
R3HCC1-208ENST00000522012 RLBP1P12271 317 aa27.22■■□□□ 1.95
R3HCC1-208ENST00000522012 FLIIQ13045 1269 aa27.22■■□□□ 1.95
R3HCC1-208ENST00000522012 PROSER3Q2NL68 480 aa27.22■■□□□ 1.95
R3HCC1-208ENST00000522012 BCL11BQ9C0K0 894 aaPredicted RBP27.22■■□□□ 1.95
R3HCC1-208ENST00000522012 PHAXQ9H814 394 aaKnown RBP27.22■■□□□ 1.95
R3HCC1-208ENST00000522012 EXOC6Q8TAG9 804 aa27.21■■□□□ 1.95
R3HCC1-208ENST00000522012 HYPKQ9NX55 129 aa27.21■■□□□ 1.95
R3HCC1-208ENST00000522012 C5P01031 1676 aa27.21■■□□□ 1.95
R3HCC1-208ENST00000522012 LOC102724428A0A0B4J2F2 783 aa27.21■■□□□ 1.95
R3HCC1-208ENST00000522012 STARD3NLO95772 234 aa27.21■■□□□ 1.95
R3HCC1-208ENST00000522012 MYL6BP14649 208 aa27.21■■□□□ 1.95
R3HCC1-208ENST00000522012 SIK1P57059 783 aa27.21■■□□□ 1.95
R3HCC1-208ENST00000522012 PDIA6Q15084 440 aa27.21■■□□□ 1.95
R3HCC1-208ENST00000522012 FKBP5Q13451 457 aaPredicted RBP27.2■■□□□ 1.94
R3HCC1-208ENST00000522012 COG6Q9Y2V7 657 aa27.2■■□□□ 1.94
R3HCC1-208ENST00000522012 BRWD3Q6RI45 1802 aa27.2■■□□□ 1.94
R3HCC1-208ENST00000522012 KAT6BQ8WYB5 2073 aa27.19■■□□□ 1.94
R3HCC1-208ENST00000522012 A1BGP04217 495 aa27.19■■□□□ 1.94
R3HCC1-208ENST00000522012 ATP6V1AP38606 617 aa27.19■■□□□ 1.94
R3HCC1-208ENST00000522012 PIP4K2AP48426 406 aaPredicted RBP27.19■■□□□ 1.94
R3HCC1-208ENST00000522012 NHSQ6T4R5 1651 aa27.18■■□□□ 1.94
R3HCC1-208ENST00000522012 TRIM37O94972 964 aa27.18■■□□□ 1.94
R3HCC1-208ENST00000522012 ERICH6BQ5W0A0 696 aa27.18■■□□□ 1.94
R3HCC1-208ENST00000522012 ERBB4Q15303 1308 aa27.17■■□□□ 1.94
R3HCC1-208ENST00000522012 TMEM57Q8N5G2 664 aa27.16■■□□□ 1.94
R3HCC1-208ENST00000522012 NBPF26B4DH59 902 aa27.15■■□□□ 1.94
R3HCC1-208ENST00000522012 CYP19A1P11511 503 aaPredicted RBP27.15■■□□□ 1.94
R3HCC1-208ENST00000522012 AIMP1Q12904 312 aaKnown RBP27.15■■□□□ 1.94
R3HCC1-208ENST00000522012 NBPF14Q5TI25 921 aa27.15■■□□□ 1.94
R3HCC1-208ENST00000522012 NBPF10Q6P3W6 841 aaKnown RBP27.15■■□□□ 1.94
R3HCC1-208ENST00000522012 NBPF15Q8N660 670 aa27.15■■□□□ 1.94
R3HCC1-208ENST00000522012 F6X3S4 739 aa27.14■■□□□ 1.94
R3HCC1-208ENST00000522012 ITPRIPQ8IWB1 547 aa27.14■■□□□ 1.94
R3HCC1-208ENST00000522012 ABCC4O15439 1325 aa27.14■■□□□ 1.93
R3HCC1-208ENST00000522012 ITPK1Q13572 414 aa27.13■■□□□ 1.93
R3HCC1-208ENST00000522012 MVPQ14764 893 aaKnown RBP27.13■■□□□ 1.93
R3HCC1-208ENST00000522012 XAGE3Q8WTP9 111 aa27.12■■□□□ 1.93
R3HCC1-208ENST00000522012 SLC4A10Q6U841 1118 aa27.11■■□□□ 1.93
R3HCC1-208ENST00000522012 COPS6Q7L5N1 327 aa27.11■■□□□ 1.93
R3HCC1-208ENST00000522012 LRP10Q7Z4F1 713 aa27.11■■□□□ 1.93
R3HCC1-208ENST00000522012 LAMB4A4D0S4 1761 aa27.11■■□□□ 1.93
R3HCC1-208ENST00000522012 DDX58O95786 925 aaKnown RBP27.1■■□□□ 1.93
R3HCC1-208ENST00000522012 KCNQ4P56696 695 aa27.1■■□□□ 1.93
R3HCC1-208ENST00000522012 BTAF1O14981 1849 aa27.09■■□□□ 1.93
R3HCC1-208ENST00000522012 PI4KAP2A4QPH2 592 aa27.09■■□□□ 1.93
R3HCC1-208ENST00000522012 PI4KAP1Q8N8J0 262 aa27.09■■□□□ 1.93
R3HCC1-208ENST00000522012 CCNL1Q9UK58 526 aaPredicted RBP27.09■■□□□ 1.93
R3HCC1-208ENST00000522012 ZNF330Q9Y3S2 320 aaPredicted RBP27.08■■□□□ 1.93
R3HCC1-208ENST00000522012 SBF2Q86WG5 1849 aa27.07■■□□□ 1.92
R3HCC1-208ENST00000522012 CRKLP46109 303 aaKnown RBP27.07■■□□□ 1.92
R3HCC1-208ENST00000522012 INTS3Q68E01 1043 aaKnown RBP27.07■■□□□ 1.92
R3HCC1-208ENST00000522012 KSR2Q6VAB6 950 aa27.07■■□□□ 1.92
R3HCC1-208ENST00000522012 DDX19BQ9UMR2 479 aa27.07■■□□□ 1.92
R3HCC1-208ENST00000522012 DNAAF4Q8WXU2 420 aa27.06■■□□□ 1.92
R3HCC1-208ENST00000522012 CCDC87Q9NVE4 849 aa27.06■■□□□ 1.92
R3HCC1-208ENST00000522012 PPP4R2Q9NY27 417 aa27.06■■□□□ 1.92
R3HCC1-208ENST00000522012 ZBTB1Q9Y2K1 713 aa27.06■■□□□ 1.92
R3HCC1-208ENST00000522012 MAP3K2Q9Y2U5 619 aa27.06■■□□□ 1.92
R3HCC1-208ENST00000522012 CCT4P50991 539 aaKnown RBP27.06■■□□□ 1.92
R3HCC1-208ENST00000522012 INTS5Q6P9B9 1019 aaKnown RBP27.06■■□□□ 1.92
R3HCC1-208ENST00000522012 RIC3Q7Z5B4 369 aa27.06■■□□□ 1.92
R3HCC1-208ENST00000522012 LINC00116Q8NCU8 138 aa27.06■■□□□ 1.92
R3HCC1-208ENST00000522012 ADCY9O60503 1353 aa27.05■■□□□ 1.92
R3HCC1-208ENST00000522012 TJP1Q07157 1748 aa27.05■■□□□ 1.92
R3HCC1-208ENST00000522012 ANKRD13DQ6ZTN6 518 aa27.05■■□□□ 1.92
R3HCC1-208ENST00000522012 CCDC125Q86Z20 511 aa27.04■■□□□ 1.92
R3HCC1-208ENST00000522012 APBA3O96018 575 aa27.03■■□□□ 1.92
R3HCC1-208ENST00000522012 TTLL7Q6ZT98 887 aa27.03■■□□□ 1.92
R3HCC1-208ENST00000522012 NPM2Q86SE8 214 aaKnown RBP27.02■■□□□ 1.92
R3HCC1-208ENST00000522012 ARXQ96QS3 562 aa27.02■■□□□ 1.92
R3HCC1-208ENST00000522012 IL6STP40189 918 aaPredicted RBP27.01■■□□□ 1.91
R3HCC1-208ENST00000522012 PLBD2Q8NHP8 589 aa27.01■■□□□ 1.91
R3HCC1-208ENST00000522012 CACNA1FO60840 1977 aa27■■□□□ 1.91
R3HCC1-208ENST00000522012 ZBTB7BO15156 539 aaPredicted RBP27■■□□□ 1.91
R3HCC1-208ENST00000522012 SRCIN1Q9C0H9 1055 aa27■■□□□ 1.91
R3HCC1-208ENST00000522012 CHMP4BQ9H444 224 aaKnown RBP27■■□□□ 1.91
R3HCC1-208ENST00000522012 BEND3Q5T5X7 828 aa26.99■■□□□ 1.91
R3HCC1-208ENST00000522012 KIF6Q6ZMV9 814 aa26.99■■□□□ 1.91
R3HCC1-208ENST00000522012 AAMPQ13685 434 aa26.98■■□□□ 1.91
R3HCC1-208ENST00000522012 SLC27A3Q5K4L6 730 aa26.98■■□□□ 1.91
R3HCC1-208ENST00000522012 ZBTB3Q9H5J0 574 aa26.98■■□□□ 1.91
R3HCC1-208ENST00000522012 LRRC4BQ9NT99 713 aa26.98■■□□□ 1.91
R3HCC1-208ENST00000522012 CNTNAP4Q9C0A0 1308 aa26.98■■□□□ 1.91
R3HCC1-208ENST00000522012 CICQ96RK0 1608 aaPredicted RBP26.97■■□□□ 1.91
R3HCC1-208ENST00000522012 METTL22Q9BUU2 404 aaPredicted RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms