RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 KCPQ6ZWJ8 1503 aa28.03■■■□□ 2.08
PABPC1-218ENST00000521865 KIF3CO14782 793 aa28.03■■■□□ 2.08
PABPC1-218ENST00000521865 HSPA6P17066 643 aa28.03■■■□□ 2.08
PABPC1-218ENST00000521865 CANXP27824 592 aaKnown RBP28.03■■■□□ 2.08
PABPC1-218ENST00000521865 GNAT3A8MTJ3 354 aa28.02■■■□□ 2.08
PABPC1-218ENST00000521865 STARD3NLO95772 234 aa28.02■■■□□ 2.08
PABPC1-218ENST00000521865 C9orf131Q5VYM1 1079 aa28.01■■■□□ 2.07
PABPC1-218ENST00000521865 COL3A1P02461 1466 aaPredicted RBP28.01■■■□□ 2.07
PABPC1-218ENST00000521865 NFIXQ14938 502 aa28■■■□□ 2.07
PABPC1-218ENST00000521865 CFAP53Q96M91 514 aa28■■■□□ 2.07
PABPC1-218ENST00000521865 IL17REQ8NFR9 667 aa27.98■■■□□ 2.07
PABPC1-218ENST00000521865 ZNF790Q6PG37 636 aa27.97■■■□□ 2.07
PABPC1-218ENST00000521865 ZNF496Q96IT1 587 aaPredicted RBP27.97■■■□□ 2.07
PABPC1-218ENST00000521865 ZNF330Q9Y3S2 320 aaPredicted RBP27.97■■■□□ 2.07
PABPC1-218ENST00000521865 SERPINB2P05120 415 aa27.96■■■□□ 2.07
PABPC1-218ENST00000521865 ADAMTS7Q9UKP4 1686 aa27.96■■■□□ 2.07
PABPC1-218ENST00000521865 CEP350Q5VT06 3117 aa27.96■■■□□ 2.07
PABPC1-218ENST00000521865 A0A087WZG4 1122 aa27.95■■■□□ 2.06
PABPC1-218ENST00000521865 BICDL1Q6ZP65 573 aa27.95■■■□□ 2.06
PABPC1-218ENST00000521865 BCL2L12Q9HB09 334 aa27.95■■■□□ 2.06
PABPC1-218ENST00000521865 PRKAR2BP31323 418 aa27.94■■■□□ 2.06
PABPC1-218ENST00000521865 TEX13AQ9BXU3 409 aaPredicted RBP27.94■■■□□ 2.06
PABPC1-218ENST00000521865 NMRK2Q9NPI5 230 aa27.94■■■□□ 2.06
PABPC1-218ENST00000521865 RNF181Q9P0P0 153 aa27.94■■■□□ 2.06
PABPC1-218ENST00000521865 NUDCQ9Y266 331 aa27.94■■■□□ 2.06
PABPC1-218ENST00000521865 TOMM70O94826 608 aa27.93■■■□□ 2.06
PABPC1-218ENST00000521865 NPM2Q86SE8 214 aaKnown RBP27.93■■■□□ 2.06
PABPC1-218ENST00000521865 HEG1Q9ULI3 1381 aa27.93■■■□□ 2.06
PABPC1-218ENST00000521865 EIF5P55010 431 aaKnown RBP27.92■■■□□ 2.06
PABPC1-218ENST00000521865 PHACTR3Q96KR7 559 aa27.92■■■□□ 2.06
PABPC1-218ENST00000521865 FMNL2Q96PY5 1086 aa27.91■■■□□ 2.06
PABPC1-218ENST00000521865 BRCA1P38398 1863 aaKnown RBP27.91■■■□□ 2.06
PABPC1-218ENST00000521865 C16orf71Q8IYS4 520 aaPredicted RBP27.9■■■□□ 2.06
PABPC1-218ENST00000521865 BTBD11A6QL63 1104 aa27.89■■■□□ 2.06
PABPC1-218ENST00000521865 U2AF1L5P0DN76 240 aaPredicted RBP27.89■■■□□ 2.06
PABPC1-218ENST00000521865 U2AF1Q01081 240 aaKnown RBP eCLIP27.89■■■□□ 2.06
PABPC1-218ENST00000521865 C2CD5Q86YS7 1000 aa27.89■■■□□ 2.06
PABPC1-218ENST00000521865 RSPH6AQ9H0K4 717 aa27.89■■■□□ 2.06
PABPC1-218ENST00000521865 VIRMAQ69YN4 1812 aaKnown RBP27.88■■■□□ 2.05
PABPC1-218ENST00000521865 H0YIN7 160 aa27.88■■■□□ 2.05
PABPC1-218ENST00000521865 TBC1D2BQ9UPU7 963 aa27.88■■■□□ 2.05
PABPC1-218ENST00000521865 KDM2BQ8NHM5 1336 aa27.88■■■□□ 2.05
PABPC1-218ENST00000521865 UBR2Q8IWV8 1755 aa27.87■■■□□ 2.05
PABPC1-218ENST00000521865 RTF1Q92541 710 aaKnown RBP27.87■■■□□ 2.05
PABPC1-218ENST00000521865 ARFGEF1Q9Y6D6 1849 aa27.87■■■□□ 2.05
PABPC1-218ENST00000521865 IL6STP40189 918 aaPredicted RBP27.86■■■□□ 2.05
PABPC1-218ENST00000521865 RASSF7Q02833 373 aa27.86■■■□□ 2.05
PABPC1-218ENST00000521865 TBC1D9BQ66K14 1250 aa27.86■■■□□ 2.05
PABPC1-218ENST00000521865 TTLL6Q8N841 843 aa27.86■■■□□ 2.05
PABPC1-218ENST00000521865 CEMIPQ8WUJ3 1361 aa27.86■■■□□ 2.05
PABPC1-218ENST00000521865 A1BGP04217 495 aa27.85■■■□□ 2.05
PABPC1-218ENST00000521865 PPP2R1AP30153 589 aa27.85■■■□□ 2.05
PABPC1-218ENST00000521865 NPHP1O15259 732 aa27.84■■■□□ 2.05
PABPC1-218ENST00000521865 KCNQ3O43525 872 aa27.84■■■□□ 2.05
PABPC1-218ENST00000521865 APLP1P51693 650 aa27.84■■■□□ 2.05
PABPC1-218ENST00000521865 CARMIL3Q8ND23 1372 aa27.84■■■□□ 2.05
PABPC1-218ENST00000521865 MCM10Q7L590 875 aa27.81■■■□□ 2.04
PABPC1-218ENST00000521865 CCDC24Q8N4L8 307 aa27.81■■■□□ 2.04
PABPC1-218ENST00000521865 RBM46Q8TBY0 533 aaKnown RBP27.81■■■□□ 2.04
PABPC1-218ENST00000521865 ZNF622Q969S3 477 aaKnown RBP eCLIP27.81■■■□□ 2.04
PABPC1-218ENST00000521865 RRAGCQ9HB90 399 aa27.81■■■□□ 2.04
PABPC1-218ENST00000521865 LMNB1P20700 586 aa27.8■■■□□ 2.04
PABPC1-218ENST00000521865 PDE6BP35913 854 aa27.8■■■□□ 2.04
PABPC1-218ENST00000521865 NRXN2Q9P2S2 1712 aa27.8■■■□□ 2.04
PABPC1-218ENST00000521865 AFDNP55196 1824 aaKnown RBP27.8■■■□□ 2.04
PABPC1-218ENST00000521865 SETDB2Q96T68 719 aa27.79■■■□□ 2.04
PABPC1-218ENST00000521865 BRIP1Q9BX63 1249 aa27.79■■■□□ 2.04
PABPC1-218ENST00000521865 PRR5LQ6MZQ0 368 aa27.78■■■□□ 2.04
PABPC1-218ENST00000521865 DZIP3Q86Y13 1208 aaKnown RBP27.78■■■□□ 2.04
PABPC1-218ENST00000521865 CAMTA2O94983 1202 aa27.77■■■□□ 2.04
PABPC1-218ENST00000521865 PIP4K2AP48426 406 aaPredicted RBP27.77■■■□□ 2.04
PABPC1-218ENST00000521865 ZNF219Q9P2Y4 722 aaPredicted RBP27.77■■■□□ 2.04
PABPC1-218ENST00000521865 PDZRN3Q9UPQ7 1066 aa27.77■■■□□ 2.04
PABPC1-218ENST00000521865 USP16Q9Y5T5 823 aa27.77■■■□□ 2.04
PABPC1-218ENST00000521865 DCTN1Q14203 1278 aa27.76■■■□□ 2.03
PABPC1-218ENST00000521865 CNBD1Q8NA66 436 aa27.76■■■□□ 2.03
PABPC1-218ENST00000521865 ZC3H4Q9UPT8 1303 aaKnown RBP27.75■■■□□ 2.03
PABPC1-218ENST00000521865 SNRPA1P09661 255 aaKnown RBP27.75■■■□□ 2.03
PABPC1-218ENST00000521865 ST5P78524 1137 aa27.75■■■□□ 2.03
PABPC1-218ENST00000521865 SIPA1L3O60292 1781 aaPredicted RBP27.75■■■□□ 2.03
PABPC1-218ENST00000521865 PRAMEF22A3QJZ6 481 aa27.74■■■□□ 2.03
PABPC1-218ENST00000521865 NEFMP07197 916 aa27.74■■■□□ 2.03
PABPC1-218ENST00000521865 FSTL1Q12841 308 aa27.73■■■□□ 2.03
PABPC1-218ENST00000521865 SCN7AQ01118 1682 aa27.72■■■□□ 2.03
PABPC1-218ENST00000521865 NFKBIEO00221 500 aa27.72■■■□□ 2.03
PABPC1-218ENST00000521865 HTATSF1O43719 755 aaKnown RBP27.72■■■□□ 2.03
PABPC1-218ENST00000521865 C21orf2O43822 256 aa27.72■■■□□ 2.03
PABPC1-218ENST00000521865 PRELPP51888 382 aa27.72■■■□□ 2.03
PABPC1-218ENST00000521865 ZNF652Q9Y2D9 606 aa27.71■■■□□ 2.03
PABPC1-218ENST00000521865 GLTPD2A6NH11 291 aa27.7■■■□□ 2.02
PABPC1-218ENST00000521865 DLEC1Q9Y238 1755 aa27.68■■■□□ 2.02
PABPC1-218ENST00000521865 TAF7Q15545 349 aaPredicted RBP27.68■■■□□ 2.02
PABPC1-218ENST00000521865 IFFO2Q5TF58 517 aa27.68■■■□□ 2.02
PABPC1-218ENST00000521865 NBPF5PQ86XG9 351 aaPredicted RBP27.68■■■□□ 2.02
PABPC1-218ENST00000521865 CNKSR1Q969H4 720 aa27.68■■■□□ 2.02
PABPC1-218ENST00000521865 CLEC4GQ6UXB4 293 aa27.67■■■□□ 2.02
PABPC1-218ENST00000521865 SMC1BQ8NDV3 1235 aa27.67■■■□□ 2.02
PABPC1-218ENST00000521865 VEGFAP15692 232 aaPredicted RBP27.66■■■□□ 2.02
PABPC1-218ENST00000521865 HTRA3P83110 453 aa27.66■■■□□ 2.02
PABPC1-218ENST00000521865 DNAJC5GQ8N7S2 189 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms