RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 UBR2Q8IWV8 1755 aa26.48■■□□□ 1.83
CERNA3-201ENST00000521403 CANXP27824 592 aaKnown RBP26.47■■□□□ 1.83
CERNA3-201ENST00000521403 PPP2R1AP30153 589 aa26.47■■□□□ 1.83
CERNA3-201ENST00000521403 PHACTR3Q96KR7 559 aa26.47■■□□□ 1.83
CERNA3-201ENST00000521403 NUDCQ9Y266 331 aa26.47■■□□□ 1.83
CERNA3-201ENST00000521403 POLRMTO00411 1230 aaKnown RBP26.46■■□□□ 1.83
CERNA3-201ENST00000521403 STARD3NLO95772 234 aa26.46■■□□□ 1.83
CERNA3-201ENST00000521403 ZNF790Q6PG37 636 aa26.46■■□□□ 1.83
CERNA3-201ENST00000521403 ARHGAP27Q6ZUM4 889 aa26.46■■□□□ 1.83
CERNA3-201ENST00000521403 RSPH6AQ9H0K4 717 aa26.46■■□□□ 1.83
CERNA3-201ENST00000521403 NARFQ9UHQ1 456 aa26.46■■□□□ 1.83
CERNA3-201ENST00000521403 KCNA3P22001 575 aa26.45■■□□□ 1.82
CERNA3-201ENST00000521403 TM4SF1P30408 202 aa26.45■■□□□ 1.82
CERNA3-201ENST00000521403 ZNF496Q96IT1 587 aaPredicted RBP26.45■■□□□ 1.82
CERNA3-201ENST00000521403 U2AF1L5P0DN76 240 aaPredicted RBP26.44■■□□□ 1.82
CERNA3-201ENST00000521403 U2AF1Q01081 240 aaKnown RBP eCLIP26.44■■□□□ 1.82
CERNA3-201ENST00000521403 PIM2Q9P1W9 311 aa26.44■■□□□ 1.82
CERNA3-201ENST00000521403 BRCA1P38398 1863 aaKnown RBP26.44■■□□□ 1.82
CERNA3-201ENST00000521403 NFIXQ14938 502 aa26.43■■□□□ 1.82
CERNA3-201ENST00000521403 CHRNA5P30532 468 aa26.42■■□□□ 1.82
CERNA3-201ENST00000521403 HEG1Q9ULI3 1381 aa26.42■■□□□ 1.82
CERNA3-201ENST00000521403 SIPA1L3O60292 1781 aaPredicted RBP26.41■■□□□ 1.82
CERNA3-201ENST00000521403 DALRD3Q5D0E6 543 aaKnown RBP26.4■■□□□ 1.82
CERNA3-201ENST00000521403 BCL2L12Q9HB09 334 aa26.4■■□□□ 1.82
CERNA3-201ENST00000521403 ZNF330Q9Y3S2 320 aaPredicted RBP26.4■■□□□ 1.82
CERNA3-201ENST00000521403 CEMIPQ8WUJ3 1361 aa26.4■■□□□ 1.82
CERNA3-201ENST00000521403 BTBD11A6QL63 1104 aa26.39■■□□□ 1.82
CERNA3-201ENST00000521403 FMNL2Q96PY5 1086 aa26.39■■□□□ 1.82
CERNA3-201ENST00000521403 TEX13AQ9BXU3 409 aaPredicted RBP26.39■■□□□ 1.82
CERNA3-201ENST00000521403 EIF5P55010 431 aaKnown RBP26.38■■□□□ 1.81
CERNA3-201ENST00000521403 A0A087WZG4 1122 aa26.37■■□□□ 1.81
CERNA3-201ENST00000521403 BICDL1Q6ZP65 573 aa26.37■■□□□ 1.81
CERNA3-201ENST00000521403 RTF1Q92541 710 aaKnown RBP26.37■■□□□ 1.81
CERNA3-201ENST00000521403 ARFGEF1Q9Y6D6 1849 aa26.37■■□□□ 1.81
CERNA3-201ENST00000521403 KCNQ3O43525 872 aa26.36■■□□□ 1.81
CERNA3-201ENST00000521403 SERPINB2P05120 415 aa26.36■■□□□ 1.81
CERNA3-201ENST00000521403 AFDNP55196 1824 aaKnown RBP26.36■■□□□ 1.81
CERNA3-201ENST00000521403 MCM10Q7L590 875 aa26.35■■□□□ 1.81
CERNA3-201ENST00000521403 NPM2Q86SE8 214 aaKnown RBP26.34■■□□□ 1.81
CERNA3-201ENST00000521403 TBC1D2BQ9UPU7 963 aa26.33■■□□□ 1.81
CERNA3-201ENST00000521403 A1BGP04217 495 aa26.32■■□□□ 1.8
CERNA3-201ENST00000521403 IL6STP40189 918 aaPredicted RBP26.32■■□□□ 1.8
CERNA3-201ENST00000521403 C9orf131Q5VYM1 1079 aa26.32■■□□□ 1.8
CERNA3-201ENST00000521403 NRXN2Q9P2S2 1712 aa26.31■■□□□ 1.8
CERNA3-201ENST00000521403 KIF3CO14782 793 aa26.31■■□□□ 1.8
CERNA3-201ENST00000521403 DCTN1Q14203 1278 aa26.31■■□□□ 1.8
CERNA3-201ENST00000521403 TBC1D9BQ66K14 1250 aa26.3■■□□□ 1.8
CERNA3-201ENST00000521403 C2CD5Q86YS7 1000 aa26.28■■□□□ 1.8
CERNA3-201ENST00000521403 CARMIL3Q8ND23 1372 aa26.28■■□□□ 1.8
CERNA3-201ENST00000521403 SCN7AQ01118 1682 aa26.28■■□□□ 1.8
CERNA3-201ENST00000521403 NEFMP07197 916 aa26.27■■□□□ 1.8
CERNA3-201ENST00000521403 RNF181Q9P0P0 153 aa26.27■■□□□ 1.8
CERNA3-201ENST00000521403 USP16Q9Y5T5 823 aa26.27■■□□□ 1.8
CERNA3-201ENST00000521403 CEP350Q5VT06 3117 aa26.27■■□□□ 1.8
CERNA3-201ENST00000521403 PRAMEF22A3QJZ6 481 aa26.26■■□□□ 1.79
CERNA3-201ENST00000521403 H0YIN7 160 aa26.26■■□□□ 1.79
CERNA3-201ENST00000521403 PIP4K2AP48426 406 aaPredicted RBP26.26■■□□□ 1.79
CERNA3-201ENST00000521403 HTATSF1O43719 755 aaKnown RBP26.25■■□□□ 1.79
CERNA3-201ENST00000521403 SNRPA1P09661 255 aaKnown RBP26.25■■□□□ 1.79
CERNA3-201ENST00000521403 NMRK2Q9NPI5 230 aa26.25■■□□□ 1.79
CERNA3-201ENST00000521403 CAMTA2O94983 1202 aa26.24■■□□□ 1.79
CERNA3-201ENST00000521403 HSPA6P17066 643 aa26.24■■□□□ 1.79
CERNA3-201ENST00000521403 DZIP3Q86Y13 1208 aaKnown RBP26.24■■□□□ 1.79
CERNA3-201ENST00000521403 TTLL6Q8N841 843 aa26.24■■□□□ 1.79
CERNA3-201ENST00000521403 NPHP1O15259 732 aa26.23■■□□□ 1.79
CERNA3-201ENST00000521403 CCDC24Q8N4L8 307 aa26.23■■□□□ 1.79
CERNA3-201ENST00000521403 SETDB2Q96T68 719 aa26.23■■□□□ 1.79
CERNA3-201ENST00000521403 DLEC1Q9Y238 1755 aa26.23■■□□□ 1.79
CERNA3-201ENST00000521403 RASSF7Q02833 373 aa26.22■■□□□ 1.79
CERNA3-201ENST00000521403 TAF7Q15545 349 aaPredicted RBP26.21■■□□□ 1.79
CERNA3-201ENST00000521403 PRR5LQ6MZQ0 368 aa26.21■■□□□ 1.79
CERNA3-201ENST00000521403 TOMM70O94826 608 aa26.2■■□□□ 1.78
CERNA3-201ENST00000521403 PDE6BP35913 854 aa26.2■■□□□ 1.78
CERNA3-201ENST00000521403 ZNF622Q969S3 477 aaKnown RBP eCLIP26.2■■□□□ 1.78
CERNA3-201ENST00000521403 BRIP1Q9BX63 1249 aa26.2■■□□□ 1.78
CERNA3-201ENST00000521403 MIS18AQ9NYP9 233 aa26.2■■□□□ 1.78
CERNA3-201ENST00000521403 CNBD1Q8NA66 436 aa26.19■■□□□ 1.78
CERNA3-201ENST00000521403 SBF1O95248 1867 aa26.19■■□□□ 1.78
CERNA3-201ENST00000521403 KDM2BQ8NHM5 1336 aa26.18■■□□□ 1.78
CERNA3-201ENST00000521403 BCORQ6W2J9 1755 aa26.18■■□□□ 1.78
CERNA3-201ENST00000521403 ANKRD31Q8N7Z5 1873 aa26.18■■□□□ 1.78
CERNA3-201ENST00000521403 PDZRN3Q9UPQ7 1066 aa26.17■■□□□ 1.78
CERNA3-201ENST00000521403 ST5P78524 1137 aa26.16■■□□□ 1.78
CERNA3-201ENST00000521403 C16orf71Q8IYS4 520 aaPredicted RBP26.16■■□□□ 1.78
CERNA3-201ENST00000521403 PLEKHF1Q96S99 279 aa26.16■■□□□ 1.78
CERNA3-201ENST00000521403 ZNF652Q9Y2D9 606 aa26.16■■□□□ 1.78
CERNA3-201ENST00000521403 DLG5Q8TDM6 1919 aa26.16■■□□□ 1.78
CERNA3-201ENST00000521403 MAPK8IP3Q9UPT6 1336 aa26.15■■□□□ 1.78
CERNA3-201ENST00000521403 NBPF26B4DH59 902 aa26.15■■□□□ 1.78
CERNA3-201ENST00000521403 LMNB1P20700 586 aa26.15■■□□□ 1.78
CERNA3-201ENST00000521403 NBPF10Q6P3W6 841 aaKnown RBP26.15■■□□□ 1.78
CERNA3-201ENST00000521403 NBPF15Q8N660 670 aa26.15■■□□□ 1.78
CERNA3-201ENST00000521403 ZNF219Q9P2Y4 722 aaPredicted RBP26.15■■□□□ 1.78
CERNA3-201ENST00000521403 NFE2L2Q16236 605 aa26.14■■□□□ 1.78
CERNA3-201ENST00000521403 PNNQ9H307 717 aaKnown RBP26.14■■□□□ 1.78
CERNA3-201ENST00000521403 CLEC4GQ6UXB4 293 aa26.13■■□□□ 1.77
CERNA3-201ENST00000521403 NBPF5PQ86XG9 351 aaPredicted RBP26.13■■□□□ 1.77
CERNA3-201ENST00000521403 PNISRQ8TF01 805 aaKnown RBP26.13■■□□□ 1.77
CERNA3-201ENST00000521403 THUMPD2Q9BTF0 503 aaKnown RBP26.13■■□□□ 1.77
CERNA3-201ENST00000521403 COL11A2P13942 1736 aaPredicted RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms