RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 LOC100996750A0A140TA64 210 aa10.33□□□□□ -0.76
PABPC1-216ENST00000520868 PSME1Q06323 249 aa10.33□□□□□ -0.76
PABPC1-216ENST00000520868 PPARGC1BQ86YN6 1023 aaKnown RBP10.33□□□□□ -0.76
PABPC1-216ENST00000520868 KRTAP4-6Q9BYQ5 205 aa10.33□□□□□ -0.76
PABPC1-216ENST00000520868 SERTAD1Q9UHV2 236 aa10.33□□□□□ -0.76
PABPC1-216ENST00000520868 USP17L3A6NCW0 530 aa10.32□□□□□ -0.76
PABPC1-216ENST00000520868 USP17L4A6NCW7 530 aa10.32□□□□□ -0.76
PABPC1-216ENST00000520868 TMEM229AB2RXF0 380 aa10.32□□□□□ -0.76
PABPC1-216ENST00000520868 ATP1A2P50993 1020 aa10.32□□□□□ -0.76
PABPC1-216ENST00000520868 ZNF385CQ66K41 422 aaPredicted RBP10.32□□□□□ -0.76
PABPC1-216ENST00000520868 USP17L2Q6R6M4 530 aa10.32□□□□□ -0.76
PABPC1-216ENST00000520868 TBC1D9Q6ZT07 1266 aa10.32□□□□□ -0.76
PABPC1-216ENST00000520868 USP17L1Q7RTZ2 530 aa10.32□□□□□ -0.76
PABPC1-216ENST00000520868 RHBDD1Q8TEB9 315 aa10.32□□□□□ -0.76
PABPC1-216ENST00000520868 ABCA10Q8WWZ4 1543 aa10.32□□□□□ -0.76
PABPC1-216ENST00000520868 A0A1B0GTH6 734 aa10.31□□□□□ -0.76
PABPC1-216ENST00000520868 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
PABPC1-216ENST00000520868 BACH1O14867 736 aa10.31□□□□□ -0.76
PABPC1-216ENST00000520868 SMTNP53814 917 aa10.31□□□□□ -0.76
PABPC1-216ENST00000520868 CALR3Q96L12 384 aaKnown RBP10.31□□□□□ -0.76
PABPC1-216ENST00000520868 USP3Q9Y6I4 520 aa10.31□□□□□ -0.76
PABPC1-216ENST00000520868 ADAMTS2O95450 1211 aa10.3□□□□□ -0.76
PABPC1-216ENST00000520868 F11P03951 625 aa10.3□□□□□ -0.76
PABPC1-216ENST00000520868 FOXR1Q6PIV2 292 aa10.3□□□□□ -0.76
PABPC1-216ENST00000520868 SLC4A9Q96Q91 983 aa10.3□□□□□ -0.76
PABPC1-216ENST00000520868 PBRM1Q86U86 1689 aa10.3□□□□□ -0.76
PABPC1-216ENST00000520868 SLURP2P0DP57 97 aa10.29□□□□□ -0.76
PABPC1-216ENST00000520868 RUBCNLQ9H714 662 aa10.29□□□□□ -0.76
PABPC1-216ENST00000520868 WRNQ14191 1432 aaPredicted RBP eCLIP10.29□□□□□ -0.76
PABPC1-216ENST00000520868 A6NJY4 79 aa10.28□□□□□ -0.76
PABPC1-216ENST00000520868 NUCKS1Q9H1E3 243 aaKnown RBP10.28□□□□□ -0.76
PABPC1-216ENST00000520868 ABCA5Q8WWZ7 1642 aa10.28□□□□□ -0.76
PABPC1-216ENST00000520868 GRIN2AQ12879 1464 aa10.28□□□□□ -0.76
PABPC1-216ENST00000520868 ERCC6L2Q5T890 1561 aa10.27□□□□□ -0.76
PABPC1-216ENST00000520868 MSX1P28360 303 aa10.27□□□□□ -0.77
PABPC1-216ENST00000520868 PLA2G4AP47712 749 aa10.27□□□□□ -0.77
PABPC1-216ENST00000520868 LYPD4Q6UWN0 246 aa10.27□□□□□ -0.77
PABPC1-216ENST00000520868 NIFKQ9BYG3 293 aaKnown RBP10.27□□□□□ -0.77
PABPC1-216ENST00000520868 TFIP11Q9UBB9 837 aaKnown RBP10.27□□□□□ -0.77
PABPC1-216ENST00000520868 CDK2AP1O14519 115 aa10.26□□□□□ -0.77
PABPC1-216ENST00000520868 MTFR1Q15390 333 aa10.26□□□□□ -0.77
PABPC1-216ENST00000520868 SVOPQ8N4V2 548 aa10.26□□□□□ -0.77
PABPC1-216ENST00000520868 MKRN1Q9UHC7 482 aaKnown RBP10.26□□□□□ -0.77
PABPC1-216ENST00000520868 CSB-PGBD3P0DP91 1061 aa10.25□□□□□ -0.77
PABPC1-216ENST00000520868 SRSF11Q05519 484 aaKnown RBP10.25□□□□□ -0.77
PABPC1-216ENST00000520868 ZNF295-AS1Q8N0V1 137 aa10.25□□□□□ -0.77
PABPC1-216ENST00000520868 PGBD3Q8N328 593 aa10.25□□□□□ -0.77
PABPC1-216ENST00000520868 LARGE2Q8N3Y3 721 aa10.25□□□□□ -0.77
PABPC1-216ENST00000520868 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.25□□□□□ -0.77
PABPC1-216ENST00000520868 TRERF1Q96PN7 1200 aa10.25□□□□□ -0.77
PABPC1-216ENST00000520868 DNAAF2Q9NVR5 837 aaKnown RBP10.25□□□□□ -0.77
PABPC1-216ENST00000520868 ZNF358Q9NW07 568 aa10.25□□□□□ -0.77
PABPC1-216ENST00000520868 MAFBQ9Y5Q3 323 aaPredicted RBP10.25□□□□□ -0.77
PABPC1-216ENST00000520868 NUP160Q12769 1436 aa10.24□□□□□ -0.77
PABPC1-216ENST00000520868 PALM3A6NDB9 673 aaPredicted RBP10.24□□□□□ -0.77
PABPC1-216ENST00000520868 LBRQ14739 615 aaKnown RBP10.24□□□□□ -0.77
PABPC1-216ENST00000520868 TPCN2Q8NHX9 752 aa10.24□□□□□ -0.77
PABPC1-216ENST00000520868 C1orf216Q8TAB5 229 aa10.24□□□□□ -0.77
PABPC1-216ENST00000520868 PPP1R12CQ9BZL4 782 aa10.24□□□□□ -0.77
PABPC1-216ENST00000520868 ADAMTS8Q9UP79 889 aa10.24□□□□□ -0.77
PABPC1-216ENST00000520868 KIAA1024Q9UPX6 916 aa10.24□□□□□ -0.77
PABPC1-216ENST00000520868 RBM19Q9Y4C8 960 aaKnown RBP10.24□□□□□ -0.77
PABPC1-216ENST00000520868 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
PABPC1-216ENST00000520868 CEP170Q5SW79 1584 aa10.23□□□□□ -0.77
PABPC1-216ENST00000520868 UBAP2LQ14157 1087 aaKnown RBP10.23□□□□□ -0.77
PABPC1-216ENST00000520868 CCDC102BQ68D86 513 aa10.23□□□□□ -0.77
PABPC1-216ENST00000520868 OGFOD1Q8N543 542 aa10.23□□□□□ -0.77
PABPC1-216ENST00000520868 MBIPQ9NS73 344 aa10.23□□□□□ -0.77
PABPC1-216ENST00000520868 IQSEC3Q9UPP2 1182 aaPredicted RBP10.23□□□□□ -0.77
PABPC1-216ENST00000520868 IGF1RP08069 1367 aa10.23□□□□□ -0.77
PABPC1-216ENST00000520868 ADAMTS12P58397 1594 aa10.22□□□□□ -0.77
PABPC1-216ENST00000520868 ZBTB7BO15156 539 aaPredicted RBP10.22□□□□□ -0.77
PABPC1-216ENST00000520868 ARHGEF15O94989 841 aa10.22□□□□□ -0.77
PABPC1-216ENST00000520868 CLDN10P78369 228 aa10.22□□□□□ -0.77
PABPC1-216ENST00000520868 SCHIP1Q9P0W5 487 aaPredicted RBP10.22□□□□□ -0.77
PABPC1-216ENST00000520868 PARP3Q9Y6F1 533 aa10.22□□□□□ -0.77
PABPC1-216ENST00000520868 CELA2BP08218 269 aaPredicted RBP10.21□□□□□ -0.77
PABPC1-216ENST00000520868 NBPF1Q3BBV0 1214 aa10.21□□□□□ -0.77
PABPC1-216ENST00000520868 EFHC2Q5JST6 749 aa10.21□□□□□ -0.77
PABPC1-216ENST00000520868 AIDAQ96BJ3 306 aa10.21□□□□□ -0.77
PABPC1-216ENST00000520868 ZNF777Q9ULD5 760 aaPredicted RBP10.21□□□□□ -0.77
PABPC1-216ENST00000520868 GTF3C3Q9Y5Q9 886 aa10.21□□□□□ -0.77
PABPC1-216ENST00000520868 ATP4AP20648 1035 aa10.2□□□□□ -0.78
PABPC1-216ENST00000520868 TOP2BQ02880 1626 aa10.2□□□□□ -0.78
PABPC1-216ENST00000520868 TBCELQ5QJ74 424 aa10.2□□□□□ -0.78
PABPC1-216ENST00000520868 SIX5Q8N196 739 aa10.2□□□□□ -0.78
PABPC1-216ENST00000520868 PRG4Q92954 1404 aaPredicted RBP10.2□□□□□ -0.78
PABPC1-216ENST00000520868 CABP1Q9NZU7 370 aa10.2□□□□□ -0.78
PABPC1-216ENST00000520868 PHF24Q9UPV7 400 aa10.2□□□□□ -0.78
PABPC1-216ENST00000520868 M0R2N6 131 aa10.19□□□□□ -0.78
PABPC1-216ENST00000520868 MX2P20592 715 aa10.19□□□□□ -0.78
PABPC1-216ENST00000520868 RASA1P20936 1047 aa10.19□□□□□ -0.78
PABPC1-216ENST00000520868 GSK3AP49840 483 aa10.19□□□□□ -0.78
PABPC1-216ENST00000520868 ACDQ96AP0 544 aa10.19□□□□□ -0.78
PABPC1-216ENST00000520868 CRISPLD1Q9H336 500 aa10.19□□□□□ -0.78
PABPC1-216ENST00000520868 ZDHHC3Q9NYG2 299 aa10.19□□□□□ -0.78
PABPC1-216ENST00000520868 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
PABPC1-216ENST00000520868 EPHA4P54764 986 aa10.18□□□□□ -0.78
PABPC1-216ENST00000520868 LARP1Q6PKG0 1096 aaKnown RBP10.18□□□□□ -0.78
PABPC1-216ENST00000520868 TNS4Q8IZW8 715 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms