RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 TEFQ10587 303 aa20.38■□□□□ 0.85
CSMD1-207ENST00000520451 UBR2Q8IWV8 1755 aa20.37■□□□□ 0.85
CSMD1-207ENST00000520451 TM4SF1P30408 202 aa20.37■□□□□ 0.85
CSMD1-207ENST00000520451 IL17REQ8NFR9 667 aa20.37■□□□□ 0.85
CSMD1-207ENST00000520451 PIM2Q9P1W9 311 aa20.37■□□□□ 0.85
CSMD1-207ENST00000520451 NARFQ9UHQ1 456 aa20.37■□□□□ 0.85
CSMD1-207ENST00000520451 CEP350Q5VT06 3117 aa20.36■□□□□ 0.85
CSMD1-207ENST00000520451 BRCA1P38398 1863 aaKnown RBP20.35■□□□□ 0.85
CSMD1-207ENST00000520451 STARD3NLO95772 234 aa20.35■□□□□ 0.85
CSMD1-207ENST00000520451 CANXP27824 592 aaKnown RBP20.35■□□□□ 0.85
CSMD1-207ENST00000520451 PRKAR2BP31323 418 aa20.35■□□□□ 0.85
CSMD1-207ENST00000520451 CHRNA5P30532 468 aa20.34■□□□□ 0.85
CSMD1-207ENST00000520451 NFIXQ14938 502 aa20.34■□□□□ 0.85
CSMD1-207ENST00000520451 DALRD3Q5D0E6 543 aaKnown RBP20.34■□□□□ 0.85
CSMD1-207ENST00000520451 ZNF790Q6PG37 636 aa20.34■□□□□ 0.85
CSMD1-207ENST00000520451 ZNF496Q96IT1 587 aaPredicted RBP20.34■□□□□ 0.85
CSMD1-207ENST00000520451 PHACTR3Q96KR7 559 aa20.34■□□□□ 0.85
CSMD1-207ENST00000520451 RSPH6AQ9H0K4 717 aa20.34■□□□□ 0.85
CSMD1-207ENST00000520451 NUDCQ9Y266 331 aa20.33■□□□□ 0.85
CSMD1-207ENST00000520451 HEG1Q9ULI3 1381 aa20.33■□□□□ 0.84
CSMD1-207ENST00000520451 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
CSMD1-207ENST00000520451 PPP2R1AP30153 589 aa20.31■□□□□ 0.84
CSMD1-207ENST00000520451 CEMIPQ8WUJ3 1361 aa20.31■□□□□ 0.84
CSMD1-207ENST00000520451 SIPA1L3O60292 1781 aaPredicted RBP20.31■□□□□ 0.84
CSMD1-207ENST00000520451 ARFGEF1Q9Y6D6 1849 aa20.3■□□□□ 0.84
CSMD1-207ENST00000520451 A0A087WZG4 1122 aa20.3■□□□□ 0.84
CSMD1-207ENST00000520451 KIF3CO14782 793 aa20.3■□□□□ 0.84
CSMD1-207ENST00000520451 U2AF1L5P0DN76 240 aaPredicted RBP20.3■□□□□ 0.84
CSMD1-207ENST00000520451 EIF5P55010 431 aaKnown RBP20.3■□□□□ 0.84
CSMD1-207ENST00000520451 U2AF1Q01081 240 aaKnown RBP eCLIP20.3■□□□□ 0.84
CSMD1-207ENST00000520451 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
CSMD1-207ENST00000520451 TEX13AQ9BXU3 409 aaPredicted RBP20.3■□□□□ 0.84
CSMD1-207ENST00000520451 SERPINB2P05120 415 aa20.29■□□□□ 0.84
CSMD1-207ENST00000520451 C9orf131Q5VYM1 1079 aa20.29■□□□□ 0.84
CSMD1-207ENST00000520451 ZNF330Q9Y3S2 320 aaPredicted RBP20.29■□□□□ 0.84
CSMD1-207ENST00000520451 BTBD11A6QL63 1104 aa20.28■□□□□ 0.84
CSMD1-207ENST00000520451 NRXN2Q9P2S2 1712 aa20.27■□□□□ 0.84
CSMD1-207ENST00000520451 AFDNP55196 1824 aaKnown RBP20.27■□□□□ 0.84
CSMD1-207ENST00000520451 KCNQ3O43525 872 aa20.27■□□□□ 0.84
CSMD1-207ENST00000520451 BICDL1Q6ZP65 573 aa20.27■□□□□ 0.84
CSMD1-207ENST00000520451 HSPA6P17066 643 aa20.26■□□□□ 0.83
CSMD1-207ENST00000520451 RTF1Q92541 710 aaKnown RBP20.26■□□□□ 0.83
CSMD1-207ENST00000520451 A1BGP04217 495 aa20.25■□□□□ 0.83
CSMD1-207ENST00000520451 IL6STP40189 918 aaPredicted RBP20.25■□□□□ 0.83
CSMD1-207ENST00000520451 RNF181Q9P0P0 153 aa20.25■□□□□ 0.83
CSMD1-207ENST00000520451 TBC1D2BQ9UPU7 963 aa20.25■□□□□ 0.83
CSMD1-207ENST00000520451 CARMIL3Q8ND23 1372 aa20.24■□□□□ 0.83
CSMD1-207ENST00000520451 TBC1D9BQ66K14 1250 aa20.24■□□□□ 0.83
CSMD1-207ENST00000520451 MCM10Q7L590 875 aa20.24■□□□□ 0.83
CSMD1-207ENST00000520451 NPM2Q86SE8 214 aaKnown RBP20.24■□□□□ 0.83
CSMD1-207ENST00000520451 SCN7AQ01118 1682 aa20.23■□□□□ 0.83
CSMD1-207ENST00000520451 C2CD5Q86YS7 1000 aa20.23■□□□□ 0.83
CSMD1-207ENST00000520451 NMRK2Q9NPI5 230 aa20.23■□□□□ 0.83
CSMD1-207ENST00000520451 H0YIN7 160 aa20.21■□□□□ 0.83
CSMD1-207ENST00000520451 DCTN1Q14203 1278 aa20.21■□□□□ 0.83
CSMD1-207ENST00000520451 TTLL6Q8N841 843 aa20.21■□□□□ 0.83
CSMD1-207ENST00000520451 TOMM70O94826 608 aa20.2■□□□□ 0.82
CSMD1-207ENST00000520451 RASSF7Q02833 373 aa20.2■□□□□ 0.82
CSMD1-207ENST00000520451 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
CSMD1-207ENST00000520451 DLEC1Q9Y238 1755 aa20.2■□□□□ 0.82
CSMD1-207ENST00000520451 PRAMEF22A3QJZ6 481 aa20.19■□□□□ 0.82
CSMD1-207ENST00000520451 CAMTA2O94983 1202 aa20.19■□□□□ 0.82
CSMD1-207ENST00000520451 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
CSMD1-207ENST00000520451 HTATSF1O43719 755 aaKnown RBP20.18■□□□□ 0.82
CSMD1-207ENST00000520451 SNRPA1P09661 255 aaKnown RBP20.18■□□□□ 0.82
CSMD1-207ENST00000520451 PRR5LQ6MZQ0 368 aa20.18■□□□□ 0.82
CSMD1-207ENST00000520451 DZIP3Q86Y13 1208 aaKnown RBP20.18■□□□□ 0.82
CSMD1-207ENST00000520451 CCDC24Q8N4L8 307 aa20.18■□□□□ 0.82
CSMD1-207ENST00000520451 KDM2BQ8NHM5 1336 aa20.18■□□□□ 0.82
CSMD1-207ENST00000520451 SETDB2Q96T68 719 aa20.17■□□□□ 0.82
CSMD1-207ENST00000520451 BRIP1Q9BX63 1249 aa20.17■□□□□ 0.82
CSMD1-207ENST00000520451 NPHP1O15259 732 aa20.16■□□□□ 0.82
CSMD1-207ENST00000520451 NEFMP07197 916 aa20.16■□□□□ 0.82
CSMD1-207ENST00000520451 PDE6BP35913 854 aa20.16■□□□□ 0.82
CSMD1-207ENST00000520451 C16orf71Q8IYS4 520 aaPredicted RBP20.16■□□□□ 0.82
CSMD1-207ENST00000520451 CNBD1Q8NA66 436 aa20.16■□□□□ 0.82
CSMD1-207ENST00000520451 ZNF622Q969S3 477 aaKnown RBP eCLIP20.16■□□□□ 0.821e-6■□□□□ 10.8
CSMD1-207ENST00000520451 SBF1O95248 1867 aa20.16■□□□□ 0.82
CSMD1-207ENST00000520451 LMNB1P20700 586 aa20.15■□□□□ 0.82
CSMD1-207ENST00000520451 PDZRN3Q9UPQ7 1066 aa20.15■□□□□ 0.82
CSMD1-207ENST00000520451 ANKRD31Q8N7Z5 1873 aa20.15■□□□□ 0.82
CSMD1-207ENST00000520451 BCORQ6W2J9 1755 aa20.14■□□□□ 0.81
CSMD1-207ENST00000520451 TAF7Q15545 349 aaPredicted RBP20.14■□□□□ 0.81
CSMD1-207ENST00000520451 ZC3H4Q9UPT8 1303 aaKnown RBP20.13■□□□□ 0.81
CSMD1-207ENST00000520451 APLP1P51693 650 aa20.13■□□□□ 0.81
CSMD1-207ENST00000520451 ST5P78524 1137 aa20.13■□□□□ 0.81
CSMD1-207ENST00000520451 RBM46Q8TBY0 533 aaKnown RBP20.13■□□□□ 0.81
CSMD1-207ENST00000520451 RRAGCQ9HB90 399 aa20.13■□□□□ 0.81
CSMD1-207ENST00000520451 MIS18AQ9NYP9 233 aa20.13■□□□□ 0.81
CSMD1-207ENST00000520451 NFKBIEO00221 500 aa20.12■□□□□ 0.81
CSMD1-207ENST00000520451 PRELPP51888 382 aa20.12■□□□□ 0.81
CSMD1-207ENST00000520451 ZNF219Q9P2Y4 722 aaPredicted RBP20.12■□□□□ 0.81
CSMD1-207ENST00000520451 ZNF652Q9Y2D9 606 aa20.12■□□□□ 0.81
CSMD1-207ENST00000520451 COL11A2P13942 1736 aaPredicted RBP20.12■□□□□ 0.81
CSMD1-207ENST00000520451 NBPF26B4DH59 902 aa20.11■□□□□ 0.81
CSMD1-207ENST00000520451 C21orf2O43822 256 aa20.11■□□□□ 0.81
CSMD1-207ENST00000520451 NBPF10Q6P3W6 841 aaKnown RBP20.11■□□□□ 0.81
CSMD1-207ENST00000520451 CLEC4GQ6UXB4 293 aa20.11■□□□□ 0.81
CSMD1-207ENST00000520451 NBPF15Q8N660 670 aa20.11■□□□□ 0.81
CSMD1-207ENST00000520451 NBPF5PQ86XG9 351 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms