RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 RGPD3A6NKT7 1758 aaPredicted RBP18.35■□□□□ 0.53
VPS37A-206ENST00000520140 RGPD4Q7Z3J3 1758 aa18.35■□□□□ 0.53
VPS37A-206ENST00000520140 COL5A3P25940 1745 aaPredicted RBP18.35■□□□□ 0.53
VPS37A-206ENST00000520140 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
VPS37A-206ENST00000520140 CYP19A1P11511 503 aaPredicted RBP18.34■□□□□ 0.53
VPS37A-206ENST00000520140 BCL2L13Q9BXK5 485 aa18.34■□□□□ 0.53
VPS37A-206ENST00000520140 ZNF330Q9Y3S2 320 aaPredicted RBP18.34■□□□□ 0.53
VPS37A-206ENST00000520140 STARD3NLO95772 234 aa18.34■□□□□ 0.53
VPS37A-206ENST00000520140 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
VPS37A-206ENST00000520140 MYL6BP14649 208 aa18.33■□□□□ 0.52
VPS37A-206ENST00000520140 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
VPS37A-206ENST00000520140 ZNF831Q5JPB2 1677 aa18.33■□□□□ 0.52
VPS37A-206ENST00000520140 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
VPS37A-206ENST00000520140 CHPF2Q9P2E5 772 aa18.32■□□□□ 0.52
VPS37A-206ENST00000520140 ZBTB1Q9Y2K1 713 aa18.32■□□□□ 0.52
VPS37A-206ENST00000520140 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
VPS37A-206ENST00000520140 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
VPS37A-206ENST00000520140 HOXB7P09629 217 aa18.31■□□□□ 0.52
VPS37A-206ENST00000520140 RREB1Q92766 1687 aa18.31■□□□□ 0.52
VPS37A-206ENST00000520140 NUP188Q5SRE5 1749 aa18.3■□□□□ 0.52
VPS37A-206ENST00000520140 NBPF26B4DH59 902 aa18.3■□□□□ 0.52
VPS37A-206ENST00000520140 NBPF14Q5TI25 921 aa18.3■□□□□ 0.52
VPS37A-206ENST00000520140 NBPF10Q6P3W6 841 aaKnown RBP18.3■□□□□ 0.52
VPS37A-206ENST00000520140 INTS5Q6P9B9 1019 aaKnown RBP18.3■□□□□ 0.52
VPS37A-206ENST00000520140 NBPF15Q8N660 670 aa18.3■□□□□ 0.52
VPS37A-206ENST00000520140 CCDC87Q9NVE4 849 aa18.3■□□□□ 0.52
VPS37A-206ENST00000520140 CICQ96RK0 1608 aaPredicted RBP18.3■□□□□ 0.52
VPS37A-206ENST00000520140 GNPATO15228 680 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 CCDC30Q5VVM6 783 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 AMIGO3Q86WK7 504 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 ARXQ96QS3 562 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 PHF14O94880 888 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 ZNF827Q17R98 1081 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 AK7Q96M32 723 aa18.29■□□□□ 0.52
VPS37A-206ENST00000520140 ANO8Q9HCE9 1232 aaPredicted RBP18.29■□□□□ 0.52
VPS37A-206ENST00000520140 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
VPS37A-206ENST00000520140 SSH1Q8WYL5 1049 aa18.28■□□□□ 0.52
VPS37A-206ENST00000520140 STK31Q9BXU1 1019 aa18.28■□□□□ 0.52
VPS37A-206ENST00000520140 PDIA6Q15084 440 aa18.28■□□□□ 0.52
VPS37A-206ENST00000520140 BCAR3O75815 825 aa18.27■□□□□ 0.52
VPS37A-206ENST00000520140 AIMP1Q12904 312 aaKnown RBP18.27■□□□□ 0.52
VPS37A-206ENST00000520140 PHAXQ9H814 394 aaKnown RBP18.27■□□□□ 0.52
VPS37A-206ENST00000520140 SMC4Q9NTJ3 1288 aa18.27■□□□□ 0.52
VPS37A-206ENST00000520140 TFCP2L1Q9NZI6 479 aa18.27■□□□□ 0.52
VPS37A-206ENST00000520140 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
VPS37A-206ENST00000520140 RARSP54136 660 aaKnown RBP18.26■□□□□ 0.51
VPS37A-206ENST00000520140 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
VPS37A-206ENST00000520140 CNTNAP4Q9C0A0 1308 aa18.26■□□□□ 0.51
VPS37A-206ENST00000520140 G2E3Q7L622 706 aa18.25■□□□□ 0.51
VPS37A-206ENST00000520140 DDX21Q9NR30 783 aaKnown RBP eCLIP18.25■□□□□ 0.51
VPS37A-206ENST00000520140 CT47B1P0C2W7 299 aaPredicted RBP18.25■□□□□ 0.51
VPS37A-206ENST00000520140 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
VPS37A-206ENST00000520140 RCAN3Q9UKA8 241 aa18.25■□□□□ 0.51
VPS37A-206ENST00000520140 RTCBQ9Y3I0 505 aaKnown RBP18.25■□□□□ 0.51
VPS37A-206ENST00000520140 UBR3Q6ZT12 1888 aa18.25■□□□□ 0.51
VPS37A-206ENST00000520140 TUBGCP6Q96RT7 1819 aa18.24■□□□□ 0.51
VPS37A-206ENST00000520140 RC3H1Q5TC82 1133 aaKnown RBP18.24■□□□□ 0.51
VPS37A-206ENST00000520140 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
VPS37A-206ENST00000520140 SLC15A2Q16348 729 aa18.23■□□□□ 0.51
VPS37A-206ENST00000520140 STK32BQ9NY57 414 aa18.23■□□□□ 0.51
VPS37A-206ENST00000520140 TBC1D2BQ9UPU7 963 aa18.23■□□□□ 0.51
VPS37A-206ENST00000520140 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.22■□□□□ 0.51
VPS37A-206ENST00000520140 MSH5O43196 834 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 RPS6KA4O75676 772 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 CENPBP07199 599 aaPredicted RBP18.22■□□□□ 0.51
VPS37A-206ENST00000520140 IL6STP40189 918 aaPredicted RBP18.22■□□□□ 0.51
VPS37A-206ENST00000520140 COPS6Q7L5N1 327 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 LRP10Q7Z4F1 713 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 MRPL50Q8N5N7 158 aaKnown RBP18.22■□□□□ 0.51
VPS37A-206ENST00000520140 XAGE3Q8WTP9 111 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 EIF5P55010 431 aaKnown RBP18.22■□□□□ 0.51
VPS37A-206ENST00000520140 ALDH1L2Q3SY69 923 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 TTLL7Q6ZT98 887 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 FRAT1Q92837 279 aaPredicted RBP18.22■□□□□ 0.51
VPS37A-206ENST00000520140 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 HYPKQ9NX55 129 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 COL15A1P39059 1388 aa18.22■□□□□ 0.51
VPS37A-206ENST00000520140 CACNA1FO60840 1977 aa18.21■□□□□ 0.51
VPS37A-206ENST00000520140 ZNF428Q96B54 188 aa18.21■□□□□ 0.51
VPS37A-206ENST00000520140 ERBB4Q15303 1308 aa18.21■□□□□ 0.51
VPS37A-206ENST00000520140 SOCS7O14512 581 aa18.2■□□□□ 0.5
VPS37A-206ENST00000520140 ARHGEF1Q92888 912 aaKnown RBP18.2■□□□□ 0.5
VPS37A-206ENST00000520140 FLIIQ13045 1269 aa18.2■□□□□ 0.5
VPS37A-206ENST00000520140 TRAPPC3LQ5T215 181 aa18.2■□□□□ 0.5
VPS37A-206ENST00000520140 PDGFDQ9GZP0 370 aaPredicted RBP18.2■□□□□ 0.5
VPS37A-206ENST00000520140 ZBTB3Q9H5J0 574 aa18.2■□□□□ 0.5
VPS37A-206ENST00000520140 FKBP5Q13451 457 aaPredicted RBP18.19■□□□□ 0.5
VPS37A-206ENST00000520140 DZIP3Q86Y13 1208 aaKnown RBP18.19■□□□□ 0.5
VPS37A-206ENST00000520140 NOB1Q9ULX3 412 aaKnown RBP18.19■□□□□ 0.5
VPS37A-206ENST00000520140 C4AP0C0L4 1744 aa18.19■□□□□ 0.5
VPS37A-206ENST00000520140 SRP68Q9UHB9 627 aaKnown RBP18.19■□□□□ 0.5
VPS37A-206ENST00000520140 PNPLA7Q6ZV29 1317 aa18.18■□□□□ 0.5
VPS37A-206ENST00000520140 PSDA5PKW4 1024 aaPredicted RBP18.18■□□□□ 0.5
VPS37A-206ENST00000520140 PLIN1O60240 522 aa18.18■□□□□ 0.5
VPS37A-206ENST00000520140 RFC4P35249 363 aa18.18■□□□□ 0.5
VPS37A-206ENST00000520140 R3HDM1Q15032 1099 aaKnown RBP18.18■□□□□ 0.5
VPS37A-206ENST00000520140 COL23A1Q86Y22 540 aaPredicted RBP18.18■□□□□ 0.5
VPS37A-206ENST00000520140 SRCAPQ6ZRS2 3230 aa18.18■□□□□ 0.5
VPS37A-206ENST00000520140 HMGB2P26583 209 aaKnown RBP18.17■□□□□ 0.5
VPS37A-206ENST00000520140 SSFA2P28290 1259 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms