RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 KIAA1522Q9P206 1035 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P46-201ENST00000520062 SERTM1A2A2V5 107 aa8.73□□□□□ -1.01
HMGB1P46-201ENST00000520062 EML1O00423 815 aa8.73□□□□□ -1.01
HMGB1P46-201ENST00000520062 TNFRSF10BO14763 440 aa8.73□□□□□ -1.01
HMGB1P46-201ENST00000520062 KLF16Q9BXK1 252 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P46-201ENST00000520062 FHDC1Q9C0D6 1143 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P46-201ENST00000520062 BCL11AQ9H165 835 aa8.73□□□□□ -1.01
HMGB1P46-201ENST00000520062 PKD2L1Q9P0L9 805 aa8.73□□□□□ -1.01
HMGB1P46-201ENST00000520062 BRPF3Q9ULD4 1205 aa8.73□□□□□ -1.01
HMGB1P46-201ENST00000520062 ZNF295-AS1Q8N0V1 137 aa8.72□□□□□ -1.01
HMGB1P46-201ENST00000520062 USP3Q9Y6I4 520 aa8.72□□□□□ -1.01
HMGB1P46-201ENST00000520062 V9GY48 417 aaPredicted RBP8.72□□□□□ -1.01
HMGB1P46-201ENST00000520062 NOS2P35228 1153 aa8.71□□□□□ -1.02
HMGB1P46-201ENST00000520062 EIF1AXP47813 144 aaKnown RBP8.71□□□□□ -1.02
HMGB1P46-201ENST00000520062 CENPCQ03188 943 aa8.71□□□□□ -1.02
HMGB1P46-201ENST00000520062 CBLBQ13191 982 aa8.71□□□□□ -1.02
HMGB1P46-201ENST00000520062 TMC7Q7Z402 723 aa8.71□□□□□ -1.02
HMGB1P46-201ENST00000520062 PPARGC1BQ86YN6 1023 aaKnown RBP8.71□□□□□ -1.02
HMGB1P46-201ENST00000520062 ITPKCQ96DU7 683 aa8.71□□□□□ -1.02
HMGB1P46-201ENST00000520062 NLRP3Q96P20 1036 aa8.71□□□□□ -1.02
HMGB1P46-201ENST00000520062 ZIC2O95409 532 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P46-201ENST00000520062 BRD2P25440 801 aaKnown RBP8.7□□□□□ -1.02
HMGB1P46-201ENST00000520062 FOXC1Q12948 553 aa8.7□□□□□ -1.02
HMGB1P46-201ENST00000520062 RTN1Q16799 776 aa8.7□□□□□ -1.02
HMGB1P46-201ENST00000520062 EAPPQ56P03 285 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P46-201ENST00000520062 DMRTB1Q96MA1 342 aa8.7□□□□□ -1.02
HMGB1P46-201ENST00000520062 LRFN2Q9ULH4 789 aa8.7□□□□□ -1.02
HMGB1P46-201ENST00000520062 TREHO43280 583 aa8.69□□□□□ -1.02
HMGB1P46-201ENST00000520062 FZD6O60353 706 aa8.69□□□□□ -1.02
HMGB1P46-201ENST00000520062 WDR4P57081 412 aaKnown RBP8.69□□□□□ -1.02
HMGB1P46-201ENST00000520062 FGD1P98174 961 aa8.69□□□□□ -1.02
HMGB1P46-201ENST00000520062 ZDHHC1Q8WTX9 485 aa8.69□□□□□ -1.02
HMGB1P46-201ENST00000520062 NIFKQ9BYG3 293 aaKnown RBP8.69□□□□□ -1.02
HMGB1P46-201ENST00000520062 A0A0G2JS52 829 aa8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 MEN1O00255 615 aa8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 GPC1P35052 558 aa8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 FMR1Q06787 632 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 PDE3BQ13370 1112 aa8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 C11orf91Q3C1V1 193 aa8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 C1orf53Q5VUE5 145 aa8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 ALDH16A1Q8IZ83 802 aa8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 RHBDD1Q8TEB9 315 aa8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 L3MBTL2Q969R5 705 aa8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 ZSCAN10Q96SZ4 725 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 FAM129BQ96TA1 746 aa8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 CABP1Q9NZU7 370 aa8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 ZNF232Q9UNY5 417 aa8.68□□□□□ -1.02
HMGB1P46-201ENST00000520062 TTC24A2A3L6 582 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P46-201ENST00000520062 TIMP2P16035 220 aa8.67□□□□□ -1.02
HMGB1P46-201ENST00000520062 AAMPQ13685 434 aa8.67□□□□□ -1.02
HMGB1P46-201ENST00000520062 PRKD2Q9BZL6 878 aa8.67□□□□□ -1.02
HMGB1P46-201ENST00000520062 ZFAND3Q9H8U3 227 aa8.67□□□□□ -1.02
HMGB1P46-201ENST00000520062 GDF9O60383 454 aa8.66□□□□□ -1.02
HMGB1P46-201ENST00000520062 P4HBP07237 508 aaKnown RBP8.66□□□□□ -1.02
HMGB1P46-201ENST00000520062 USP5P45974 858 aa8.66□□□□□ -1.02
HMGB1P46-201ENST00000520062 DSC3Q14574 896 aa8.66□□□□□ -1.02
HMGB1P46-201ENST00000520062 CYP4X1Q8N118 509 aa8.66□□□□□ -1.02
HMGB1P46-201ENST00000520062 MEIOBQ8N635 442 aa8.66□□□□□ -1.02
HMGB1P46-201ENST00000520062 ALKBH8Q96BT7 664 aaKnown RBP8.66□□□□□ -1.02
HMGB1P46-201ENST00000520062 AGBL1Q96MI9 1066 aa8.66□□□□□ -1.02
HMGB1P46-201ENST00000520062 CCDC87Q9NVE4 849 aa8.66□□□□□ -1.02
HMGB1P46-201ENST00000520062 TOR4AQ9NXH8 423 aa8.66□□□□□ -1.02
HMGB1P46-201ENST00000520062 J3QL48 77 aa8.65□□□□□ -1.02
HMGB1P46-201ENST00000520062 IGHA2P01877 340 aa8.65□□□□□ -1.02
HMGB1P46-201ENST00000520062 RELBQ01201 579 aa8.65□□□□□ -1.02
HMGB1P46-201ENST00000520062 MMRN1Q13201 1228 aa8.65□□□□□ -1.02
HMGB1P46-201ENST00000520062 SH3PXD2AQ5TCZ1 1133 aa8.65□□□□□ -1.02
HMGB1P46-201ENST00000520062 TMEM214Q6NUQ4 689 aaKnown RBP8.65□□□□□ -1.02
HMGB1P46-201ENST00000520062 TMC1Q8TDI8 760 aa8.65□□□□□ -1.02
HMGB1P46-201ENST00000520062 NGLY1Q96IV0 654 aa8.65□□□□□ -1.02
HMGB1P46-201ENST00000520062 PHACTR1Q9C0D0 580 aa8.65□□□□□ -1.02
HMGB1P46-201ENST00000520062 MZF1P28698 734 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P46-201ENST00000520062 DGKZQ13574 1117 aa8.64□□□□□ -1.03
HMGB1P46-201ENST00000520062 HIF1AQ16665 826 aa8.64□□□□□ -1.03
HMGB1P46-201ENST00000520062 GNASQ5JWF2 1037 aa8.64□□□□□ -1.03
HMGB1P46-201ENST00000520062 GJD3Q8N144 294 aa8.64□□□□□ -1.03
HMGB1P46-201ENST00000520062 GRIP2Q9C0E4 1043 aa8.64□□□□□ -1.03
HMGB1P46-201ENST00000520062 HCN4Q9Y3Q4 1203 aa8.64□□□□□ -1.03
HMGB1P46-201ENST00000520062 ZBTB39O15060 712 aa8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 TCF3P15923 654 aa8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 ITGAEP38570 1179 aa8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 RNF144AP50876 292 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 PRR20EP86478 221 aa8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 PRR20CP86479 221 aa8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 PRR20DP86480 221 aa8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 PRR20BP86481 221 aa8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 PRR20AP86496 221 aa8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 PLCB3Q01970 1234 aa8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 TAGLNQ01995 201 aaKnown RBP8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 ETFBKMTQ8IXQ9 262 aa8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 TSEN34Q9BSV6 310 aaKnown RBP8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 ZNF395Q9H8N7 513 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 GPC6Q9Y625 555 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P46-201ENST00000520062 SMPD1P17405 629 aa8.62□□□□□ -1.03
HMGB1P46-201ENST00000520062 EHHADHQ08426 723 aa8.62□□□□□ -1.03
HMGB1P46-201ENST00000520062 FAM26DQ5JW98 314 aa8.62□□□□□ -1.03
HMGB1P46-201ENST00000520062 IFT43Q96FT9 208 aa8.62□□□□□ -1.03
HMGB1P46-201ENST00000520062 ZDHHC3Q9NYG2 299 aa8.62□□□□□ -1.03
HMGB1P46-201ENST00000520062 PLA2G2EQ9NZK7 142 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms