RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 CCT2P78371 535 aaKnown RBP6.78□□□□□ -1.32
AP3B1-204ENST00000519295 FAM9BQ8IZU0 186 aa6.78□□□□□ -1.32
AP3B1-204ENST00000519295 NRBP1Q9UHY1 535 aa6.78□□□□□ -1.32
AP3B1-204ENST00000519295 CFAP69A5D8W1 941 aa6.77□□□□□ -1.32
AP3B1-204ENST00000519295 GOLGA6CA6NDK9 693 aa6.77□□□□□ -1.32
AP3B1-204ENST00000519295 GOLGA6BA6NDN3 693 aa6.77□□□□□ -1.32
AP3B1-204ENST00000519295 GOLGA6DP0CG33 693 aa6.77□□□□□ -1.32
AP3B1-204ENST00000519295 RBM25P49756 843 aaKnown RBP6.77□□□□□ -1.32
AP3B1-204ENST00000519295 NLRP13Q86W25 1043 aa6.77□□□□□ -1.32
AP3B1-204ENST00000519295 ZNF526Q8TF50 670 aaPredicted RBP6.77□□□□□ -1.32
AP3B1-204ENST00000519295 GOLGA6AQ9NYA3 693 aa6.77□□□□□ -1.32
AP3B1-204ENST00000519295 CHIC2Q9UKJ5 165 aa6.77□□□□□ -1.32
AP3B1-204ENST00000519295 KDM3BQ7LBC6 1761 aa6.77□□□□□ -1.33
AP3B1-204ENST00000519295 FAM83GA6ND36 823 aa6.77□□□□□ -1.33
AP3B1-204ENST00000519295 ALDH1B1P30837 517 aa6.77□□□□□ -1.33
AP3B1-204ENST00000519295 KRT28Q7Z3Y7 464 aa6.77□□□□□ -1.33
AP3B1-204ENST00000519295 STAG3Q9UJ98 1225 aa6.77□□□□□ -1.33
AP3B1-204ENST00000519295 KDM6AO15550 1401 aaPredicted RBP6.77□□□□□ -1.33
AP3B1-204ENST00000519295 KLHL33A6NCF5 533 aa6.76□□□□□ -1.33
AP3B1-204ENST00000519295 RIOK3O14730 519 aaKnown RBP6.76□□□□□ -1.33
AP3B1-204ENST00000519295 ZHX1Q9UKY1 873 aaPredicted RBP6.76□□□□□ -1.33
AP3B1-204ENST00000519295 SYNRGQ9UMZ2 1314 aa6.76□□□□□ -1.33
AP3B1-204ENST00000519295 KCNV2Q8TDN2 545 aa6.76□□□□□ -1.33
AP3B1-204ENST00000519295 AFDNP55196 1824 aaKnown RBP6.76□□□□□ -1.33
AP3B1-204ENST00000519295 INSRP06213 1382 aa6.76□□□□□ -1.33
AP3B1-204ENST00000519295 KIF16BQ96L93 1317 aa6.76□□□□□ -1.33
AP3B1-204ENST00000519295 KIF20AO95235 890 aa6.76□□□□□ -1.33
AP3B1-204ENST00000519295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.76□□□□□ -1.331e-6■■■□□ 15.5
AP3B1-204ENST00000519295 KCNV1Q6PIU1 500 aa6.76□□□□□ -1.33
AP3B1-204ENST00000519295 ZNF662Q6ZS27 426 aa6.76□□□□□ -1.33
AP3B1-204ENST00000519295 USP35Q9P2H5 1018 aa6.76□□□□□ -1.33
AP3B1-204ENST00000519295 FER1L6Q2WGJ9 1857 aa6.75□□□□□ -1.33
AP3B1-204ENST00000519295 SATB1Q01826 763 aa6.75□□□□□ -1.33
AP3B1-204ENST00000519295 HSP90AB3PQ58FF7 597 aa6.75□□□□□ -1.33
AP3B1-204ENST00000519295 TONSLQ96HA7 1378 aa6.75□□□□□ -1.33
AP3B1-204ENST00000519295 ARID4AP29374 1257 aaPredicted RBP6.75□□□□□ -1.33
AP3B1-204ENST00000519295 STK24Q9Y6E0 443 aa6.75□□□□□ -1.33
AP3B1-204ENST00000519295 NSD3Q9BZ95 1437 aa6.74□□□□□ -1.33
AP3B1-204ENST00000519295 MAP3K19Q56UN5 1328 aa6.74□□□□□ -1.33
AP3B1-204ENST00000519295 EP400Q96L91 3159 aa6.74□□□□□ -1.33
AP3B1-204ENST00000519295 KDRP35968 1356 aa6.74□□□□□ -1.33
AP3B1-204ENST00000519295 NOP2P46087 812 aaKnown RBP6.74□□□□□ -1.33
AP3B1-204ENST00000519295 CEP126Q9P2H0 1117 aa6.74□□□□□ -1.33
AP3B1-204ENST00000519295 ERBB4Q15303 1308 aa6.74□□□□□ -1.33
AP3B1-204ENST00000519295 SNRNP27Q8WVK2 155 aaKnown RBP6.74□□□□□ -1.33
AP3B1-204ENST00000519295 SMC3Q9UQE7 1217 aa6.74□□□□□ -1.33
AP3B1-204ENST00000519295 PSME4Q14997 1843 aa6.74□□□□□ -1.33
AP3B1-204ENST00000519295 FAM200BP0CF97 657 aa6.74□□□□□ -1.33
AP3B1-204ENST00000519295 MSL3Q8N5Y2 521 aaKnown RBP6.74□□□□□ -1.33
AP3B1-204ENST00000519295 TRIM44Q96DX7 344 aaPredicted RBP6.74□□□□□ -1.33
AP3B1-204ENST00000519295 ARPC5LQ9BPX5 153 aa6.74□□□□□ -1.33
AP3B1-204ENST00000519295 GPBP1L1Q9HC44 474 aaPredicted RBP6.74□□□□□ -1.33
AP3B1-204ENST00000519295 DDX60Q8IY21 1712 aaKnown RBP6.74□□□□□ -1.33
AP3B1-204ENST00000519295 ERBB3P21860 1342 aa6.73□□□□□ -1.33
AP3B1-204ENST00000519295 ANKRD31Q8N7Z5 1873 aa6.73□□□□□ -1.33
AP3B1-204ENST00000519295 ARHGEF10LQ9HCE6 1279 aa6.73□□□□□ -1.33
AP3B1-204ENST00000519295 WDR17Q8IZU2 1322 aa6.73□□□□□ -1.33
AP3B1-204ENST00000519295 KRBA2Q6ZNG9 492 aa6.73□□□□□ -1.33
AP3B1-204ENST00000519295 KRT27Q7Z3Y8 459 aa6.73□□□□□ -1.33
AP3B1-204ENST00000519295 LSM14AQ8ND56 463 aaKnown RBP6.73□□□□□ -1.33
AP3B1-204ENST00000519295 SLC27A2O14975 620 aa6.73□□□□□ -1.33
AP3B1-204ENST00000519295 SWT1Q5T5J6 900 aaKnown RBP6.73□□□□□ -1.33
AP3B1-204ENST00000519295 MICALL1Q8N3F8 863 aa6.73□□□□□ -1.33
AP3B1-204ENST00000519295 GPATCH3Q96I76 525 aa6.73□□□□□ -1.33
AP3B1-204ENST00000519295 ANKRD36CQ5JPF3 1778 aa6.73□□□□□ -1.33
AP3B1-204ENST00000519295 NAT1P18440 290 aa6.72□□□□□ -1.33
AP3B1-204ENST00000519295 BDNFP23560 247 aa6.72□□□□□ -1.33
AP3B1-204ENST00000519295 NBPF6Q5VWK0 638 aa6.72□□□□□ -1.33
AP3B1-204ENST00000519295 FAM196AQ6ZSG2 479 aa6.72□□□□□ -1.33
AP3B1-204ENST00000519295 NBPF5PQ86XG9 351 aaPredicted RBP6.72□□□□□ -1.33
AP3B1-204ENST00000519295 NBPF4Q96M43 638 aa6.72□□□□□ -1.33
AP3B1-204ENST00000519295 CGNL1Q0VF96 1302 aa6.72□□□□□ -1.33
AP3B1-204ENST00000519295 GYS2P54840 703 aa6.72□□□□□ -1.33
AP3B1-204ENST00000519295 SEPT12Q8IYM1 358 aa6.72□□□□□ -1.33
AP3B1-204ENST00000519295 AGAP3Q96P47 875 aa6.72□□□□□ -1.33
AP3B1-204ENST00000519295 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.72□□□□□ -1.333e-6■■■■■ 156.7
AP3B1-204ENST00000519295 SUN2Q9UH99 717 aa6.72□□□□□ -1.33
AP3B1-204ENST00000519295 FEZ2Q9UHY8 353 aaPredicted RBP6.72□□□□□ -1.33
AP3B1-204ENST00000519295 COL3A1P02461 1466 aaPredicted RBP6.72□□□□□ -1.33
AP3B1-204ENST00000519295 LTBP1Q14766 1721 aa6.71□□□□□ -1.33
AP3B1-204ENST00000519295 EPB41L2O43491 1005 aaKnown RBP6.71□□□□□ -1.33
AP3B1-204ENST00000519295 ARHGEF25Q86VW2 580 aa6.71□□□□□ -1.33
AP3B1-204ENST00000519295 ZRANB1Q9UGI0 708 aa6.71□□□□□ -1.33
AP3B1-204ENST00000519295 FSD2A1L4K1 749 aa6.71□□□□□ -1.34
AP3B1-204ENST00000519295 TPD52L2O43399 206 aaKnown RBP6.71□□□□□ -1.34
AP3B1-204ENST00000519295 HMGB2P26583 209 aaKnown RBP6.71□□□□□ -1.34
AP3B1-204ENST00000519295 PTGER2P43116 358 aa6.71□□□□□ -1.34
AP3B1-204ENST00000519295 MARCH6O60337 910 aa6.71□□□□□ -1.34
AP3B1-204ENST00000519295 COL11A2P13942 1736 aaPredicted RBP6.71□□□□□ -1.34
AP3B1-204ENST00000519295 ERCC3P19447 782 aa6.71□□□□□ -1.34
AP3B1-204ENST00000519295 RBBP6Q7Z6E9 1792 aaKnown RBP6.71□□□□□ -1.34
AP3B1-204ENST00000519295 ZNF513Q8N8E2 541 aaPredicted RBP6.7□□□□□ -1.34
AP3B1-204ENST00000519295 IPO8O15397 1037 aaKnown RBP6.7□□□□□ -1.34
AP3B1-204ENST00000519295 SYNPO2Q9UMS6 1093 aa6.7□□□□□ -1.34
AP3B1-204ENST00000519295 KCPQ6ZWJ8 1503 aa6.7□□□□□ -1.34
AP3B1-204ENST00000519295 ANKRD36BQ8N2N9 1353 aa6.7□□□□□ -1.34
AP3B1-204ENST00000519295 N4BP2Q86UW6 1770 aaPredicted RBP6.7□□□□□ -1.34
AP3B1-204ENST00000519295 CHMLP26374 656 aa6.7□□□□□ -1.34
AP3B1-204ENST00000519295 PTK7Q13308 1070 aa6.7□□□□□ -1.34
AP3B1-204ENST00000519295 WAPLQ7Z5K2 1190 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms