RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-209	ENST00000518930	AKT1S1	Q96B36	256 aa		31.39	■■■□□ 2.62
PCM1-209	ENST00000518930	QSER1	Q2KHR3	1735 aa		31.38	■■■□□ 2.61
PCM1-209	ENST00000518930	SLC15A2	Q16348	729 aa		31.38	■■■□□ 2.61
PCM1-209	ENST00000518930	RC3H1	Q5TC82	1133 aa	Known RBP	31.38	■■■□□ 2.61
PCM1-209	ENST00000518930	CCDC87	Q9NVE4	849 aa		31.38	■■■□□ 2.61
PCM1-209	ENST00000518930	USP16	Q9Y5T5	823 aa		31.38	■■■□□ 2.61
PCM1-209	ENST00000518930	UBR3	Q6ZT12	1888 aa		31.38	■■■□□ 2.61
PCM1-209	ENST00000518930	MYH14	Q7Z406	1995 aa	Known RBP	31.37	■■■□□ 2.61
PCM1-209	ENST00000518930	GNPAT	O15228	680 aa		31.37	■■■□□ 2.61
PCM1-209	ENST00000518930	HOXB7	P09629	217 aa		31.37	■■■□□ 2.61
PCM1-209	ENST00000518930	SLFN5	Q08AF3	891 aa		31.37	■■■□□ 2.61
PCM1-209	ENST00000518930	TFCP2L1	Q9NZI6	479 aa		31.37	■■■□□ 2.61
PCM1-209	ENST00000518930	DUSP27	Q5VZP5	1158 aa		31.36	■■■□□ 2.61
PCM1-209	ENST00000518930	CDCA7L	Q96GN5	454 aa		31.36	■■■□□ 2.61
PCM1-209	ENST00000518930	SOS1	Q07889	1333 aa	Predicted RBP	31.34	■■■□□ 2.61
PCM1-209	ENST00000518930	YTHDC1	Q96MU7	727 aa	Known RBP	31.34	■■■□□ 2.61
PCM1-209	ENST00000518930	C8orf58	Q8NAV2	365 aa		31.33	■■■□□ 2.61
PCM1-209	ENST00000518930	ELL2	O00472	640 aa	Predicted RBP	31.32	■■■□□ 2.6
PCM1-209	ENST00000518930	EIF2S2	P20042	333 aa	Known RBP	31.32	■■■□□ 2.6
PCM1-209	ENST00000518930	INTS5	Q6P9B9	1019 aa	Known RBP	31.32	■■■□□ 2.6
PCM1-209	ENST00000518930	ZBTB1	Q9Y2K1	713 aa		31.32	■■■□□ 2.6
PCM1-209	ENST00000518930	RTCB	Q9Y3I0	505 aa	Known RBP	31.32	■■■□□ 2.6
PCM1-209	ENST00000518930	EXOSC9	Q06265	439 aa	Known RBP	31.31	■■■□□ 2.6
PCM1-209	ENST00000518930	TWISTNB	Q3B726	338 aa	Predicted RBP	31.31	■■■□□ 2.6
PCM1-209	ENST00000518930	HDGFL1	Q5TGJ6	251 aa		31.31	■■■□□ 2.6
PCM1-209	ENST00000518930	A1BG	P04217	495 aa		31.3	■■■□□ 2.6
PCM1-209	ENST00000518930	CANX	P27824	592 aa	Known RBP	31.3	■■■□□ 2.6
PCM1-209	ENST00000518930	R3HDM1	Q15032	1099 aa	Known RBP	31.3	■■■□□ 2.6
PCM1-209	ENST00000518930	CHMP4A	Q9BY43	222 aa		31.3	■■■□□ 2.6
PCM1-209	ENST00000518930	ERBB4	Q15303	1308 aa		31.29	■■■□□ 2.6
PCM1-209	ENST00000518930	RPS6KA4	O75676	772 aa		31.29	■■■□□ 2.6
PCM1-209	ENST00000518930	PHF14	O94880	888 aa		31.29	■■■□□ 2.6
PCM1-209	ENST00000518930	SSFA2	P28290	1259 aa		31.29	■■■□□ 2.6
PCM1-209	ENST00000518930	TSPYL6	Q8N831	410 aa		31.28	■■■□□ 2.6
PCM1-209	ENST00000518930	FLAD1	Q8NFF5	587 aa		31.28	■■■□□ 2.6
PCM1-209	ENST00000518930	NECTIN2	Q92692	538 aa		31.28	■■■□□ 2.6
PCM1-209	ENST00000518930	NPM2	Q86SE8	214 aa	Known RBP	31.27	■■■□□ 2.6
PCM1-209	ENST00000518930	TRMT2A	Q8IZ69	625 aa	Known RBP	31.27	■■■□□ 2.6
PCM1-209	ENST00000518930	ZNF330	Q9Y3S2	320 aa	Predicted RBP	31.27	■■■□□ 2.6
PCM1-209	ENST00000518930	PNPLA7	Q6ZV29	1317 aa		31.26	■■■□□ 2.6
PCM1-209	ENST00000518930	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	31.26	■■■□□ 2.59
PCM1-209	ENST00000518930	ADRA2B	P18089	450 aa		31.26	■■■□□ 2.59
PCM1-209	ENST00000518930	COL15A1	P39059	1388 aa		31.26	■■■□□ 2.59
PCM1-209	ENST00000518930	C4A	P0C0L4	1744 aa		31.26	■■■□□ 2.59
PCM1-209	ENST00000518930	PSD	A5PKW4	1024 aa	Predicted RBP	31.25	■■■□□ 2.59
PCM1-209	ENST00000518930	IL6ST	P40189	918 aa	Predicted RBP	31.25	■■■□□ 2.59
PCM1-209	ENST00000518930	MSH5	O43196	834 aa		31.24	■■■□□ 2.59
PCM1-209	ENST00000518930	PIP4K2A	P48426	406 aa	Predicted RBP	31.24	■■■□□ 2.59
PCM1-209	ENST00000518930	TRAPPC3L	Q5T215	181 aa		31.23	■■■□□ 2.59
PCM1-209	ENST00000518930	CCDC30	Q5VVM6	783 aa		31.23	■■■□□ 2.59
PCM1-209	ENST00000518930	AMIGO3	Q86WK7	504 aa		31.23	■■■□□ 2.59
PCM1-209	ENST00000518930	CASZ1	Q86V15	1759 aa		31.22	■■■□□ 2.59
PCM1-209	ENST00000518930	MYL6B	P14649	208 aa		31.22	■■■□□ 2.59
PCM1-209	ENST00000518930		A0A087WZG4	1122 aa		31.21	■■■□□ 2.59
PCM1-209	ENST00000518930	NBPF26	B4DH59	902 aa		31.21	■■■□□ 2.59
PCM1-209	ENST00000518930	NBPF10	Q6P3W6	841 aa	Known RBP	31.21	■■■□□ 2.59
PCM1-209	ENST00000518930	SMIM5	Q71RC9	77 aa		31.21	■■■□□ 2.59
PCM1-209	ENST00000518930	NBPF15	Q8N660	670 aa		31.21	■■■□□ 2.59
PCM1-209	ENST00000518930	CHPF2	Q9P2E5	772 aa		31.21	■■■□□ 2.59
PCM1-209	ENST00000518930	EIF5	P55010	431 aa	Known RBP	31.2	■■■□□ 2.59
PCM1-209	ENST00000518930	STK31	Q9BXU1	1019 aa		31.2	■■■□□ 2.59
PCM1-209	ENST00000518930	DBF4	Q9UBU7	674 aa	Predicted RBP	31.2	■■■□□ 2.59
PCM1-209	ENST00000518930	VAMP4	O75379	141 aa		31.19	■■■□□ 2.58
PCM1-209	ENST00000518930	RFC4	P35249	363 aa		31.19	■■■□□ 2.58
PCM1-209	ENST00000518930	COL23A1	Q86Y22	540 aa	Predicted RBP	31.19	■■■□□ 2.58
PCM1-209	ENST00000518930	DDX21	Q9NR30	783 aa	Known RBP eCLIP	31.19	■■■□□ 2.58
PCM1-209	ENST00000518930	ARHGEF1	Q92888	912 aa	Known RBP	31.18	■■■□□ 2.58
PCM1-209	ENST00000518930	SCN7A	Q01118	1682 aa		31.16	■■■□□ 2.58
PCM1-209	ENST00000518930	CT47B1	P0C2W7	299 aa	Predicted RBP	31.16	■■■□□ 2.58
PCM1-209	ENST00000518930	PDIA6	Q15084	440 aa		31.16	■■■□□ 2.58
PCM1-209	ENST00000518930	ARX	Q96QS3	562 aa		31.16	■■■□□ 2.58
PCM1-209	ENST00000518930	ANXA1	P04083	346 aa		31.15	■■■□□ 2.58
PCM1-209	ENST00000518930	PROSER3	Q2NL68	480 aa		31.15	■■■□□ 2.58
PCM1-209	ENST00000518930	HYPK	Q9NX55	129 aa		31.15	■■■□□ 2.58
PCM1-209	ENST00000518930	BCOR	Q6W2J9	1755 aa		31.15	■■■□□ 2.58
PCM1-209	ENST00000518930	CACNA1F	O60840	1977 aa		31.14	■■■□□ 2.58
PCM1-209	ENST00000518930	ZPR1	O75312	459 aa		31.13	■■■□□ 2.57
PCM1-209	ENST00000518930	DZIP3	Q86Y13	1208 aa	Known RBP	31.13	■■■□□ 2.57
PCM1-209	ENST00000518930	ZNF428	Q96B54	188 aa		31.13	■■■□□ 2.57
PCM1-209	ENST00000518930	PDGFD	Q9GZP0	370 aa	Predicted RBP	31.13	■■■□□ 2.57
PCM1-209	ENST00000518930	TCERG1	O14776	1098 aa	Known RBP	31.12	■■■□□ 2.57
PCM1-209	ENST00000518930	KIF6	Q6ZMV9	814 aa		31.12	■■■□□ 2.57
PCM1-209	ENST00000518930	SLC16A10	Q8TF71	515 aa		31.12	■■■□□ 2.57
PCM1-209	ENST00000518930	USP42	Q9H9J4	1324 aa	Known RBP	31.12	■■■□□ 2.57
PCM1-209	ENST00000518930	NARF	Q9UHQ1	456 aa		31.11	■■■□□ 2.57
PCM1-209	ENST00000518930	TBC1D2B	Q9UPU7	963 aa		31.11	■■■□□ 2.57
PCM1-209	ENST00000518930	LRP10	Q7Z4F1	713 aa		31.09	■■■□□ 2.57
PCM1-209	ENST00000518930	SRP68	Q9UHB9	627 aa	Known RBP	31.09	■■■□□ 2.57
PCM1-209	ENST00000518930	SLC4A2	P04920	1241 aa		31.08	■■■□□ 2.57
PCM1-209	ENST00000518930	AIMP1	Q12904	312 aa	Known RBP	31.08	■■■□□ 2.57
PCM1-209	ENST00000518930	USPL1	Q5W0Q7	1092 aa		31.08	■■■□□ 2.57
PCM1-209	ENST00000518930	XAGE3	Q8WTP9	111 aa		31.08	■■■□□ 2.57
PCM1-209	ENST00000518930	COPS6	Q7L5N1	327 aa		31.07	■■■□□ 2.56
PCM1-209	ENST00000518930	ZBTB7A	O95365	584 aa		31.06	■■■□□ 2.56
PCM1-209	ENST00000518930	MTFR1L	Q9H019	292 aa		31.06	■■■□□ 2.56
PCM1-209	ENST00000518930	TTLL7	Q6ZT98	887 aa		31.05	■■■□□ 2.56
PCM1-209	ENST00000518930	ZNF652	Q9Y2D9	606 aa		31.05	■■■□□ 2.56
PCM1-209	ENST00000518930	MAP3K15	Q6ZN16	1313 aa		31.04	■■■□□ 2.56
PCM1-209	ENST00000518930	CAMTA2	O94983	1202 aa		31.04	■■■□□ 2.56
PCM1-209	ENST00000518930	GYS1	P13807	737 aa		31.04	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms