RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SPATA31A7Q8IWB4 1347 aa22.7■■□□□ 1.22
SDC2-202ENST00000518385 NKX1-1Q15270 411 aaPredicted RBP22.7■■□□□ 1.22
SDC2-202ENST00000518385 SNX21Q969T3 373 aa22.7■■□□□ 1.22
SDC2-202ENST00000518385 SCN11AQ9UI33 1791 aa22.7■■□□□ 1.22
SDC2-202ENST00000518385 CDCA7Q9BWT1 371 aaPredicted RBP22.69■■□□□ 1.22
SDC2-202ENST00000518385 BTBD11A6QL63 1104 aa22.68■■□□□ 1.22
SDC2-202ENST00000518385 NUCB1Q02818 461 aa22.68■■□□□ 1.22
SDC2-202ENST00000518385 RPAP2Q8IXW5 612 aaPredicted RBP22.68■■□□□ 1.22
SDC2-202ENST00000518385 SLKQ9H2G2 1235 aaPredicted RBP22.68■■□□□ 1.22
SDC2-202ENST00000518385 BCL9LQ86UU0 1499 aa22.68■■□□□ 1.22
SDC2-202ENST00000518385 EIF4A1P60842 406 aaKnown RBP22.67■■□□□ 1.22
SDC2-202ENST00000518385 HSCBQ8IWL3 235 aa22.67■■□□□ 1.22
SDC2-202ENST00000518385 SLC52A2Q9HAB3 445 aa22.67■■□□□ 1.22
SDC2-202ENST00000518385 DDX54Q8TDD1 881 aaKnown RBP22.67■■□□□ 1.22
SDC2-202ENST00000518385 SIPA1L3O60292 1781 aaPredicted RBP22.66■■□□□ 1.22
SDC2-202ENST00000518385 SHANK3Q9BYB0 1731 aa22.66■■□□□ 1.22
SDC2-202ENST00000518385 MRE11P49959 708 aa22.66■■□□□ 1.22
SDC2-202ENST00000518385 VPS72Q15906 364 aa22.66■■□□□ 1.22
SDC2-202ENST00000518385 EXOC5O00471 708 aa22.65■■□□□ 1.22
SDC2-202ENST00000518385 RBM25P49756 843 aaKnown RBP22.65■■□□□ 1.22
SDC2-202ENST00000518385 BARGINQ6ZT62 677 aa22.65■■□□□ 1.22
SDC2-202ENST00000518385 FLIIQ13045 1269 aa22.64■■□□□ 1.22
SDC2-202ENST00000518385 NFATC2IPQ8NCF5 419 aa22.64■■□□□ 1.22
SDC2-202ENST00000518385 PXDNLA1KZ92 1463 aa22.64■■□□□ 1.21
SDC2-202ENST00000518385 SKOR2Q2VWA4 1001 aaPredicted RBP22.63■■□□□ 1.21
SDC2-202ENST00000518385 HDGFL1Q5TGJ6 251 aa22.63■■□□□ 1.21
SDC2-202ENST00000518385 MEX3CQ5U5Q3 659 aaKnown RBP22.63■■□□□ 1.21
SDC2-202ENST00000518385 CCDC9Q9Y3X0 531 aaKnown RBP22.63■■□□□ 1.21
SDC2-202ENST00000518385 WNK3Q9BYP7 1800 aa22.63■■□□□ 1.21
SDC2-202ENST00000518385 MRC1P22897 1456 aa22.63■■□□□ 1.21
SDC2-202ENST00000518385 ERVV-2B6SEH9 535 aa22.63■■□□□ 1.21
SDC2-202ENST00000518385 KCNQ3O43525 872 aa22.63■■□□□ 1.21
SDC2-202ENST00000518385 G2E3Q7L622 706 aa22.63■■□□□ 1.21
SDC2-202ENST00000518385 CHD1LQ86WJ1 897 aa22.63■■□□□ 1.21
SDC2-202ENST00000518385 ANKRD44Q8N8A2 993 aa22.63■■□□□ 1.21
SDC2-202ENST00000518385 USP21Q9UK80 565 aa22.63■■□□□ 1.21
SDC2-202ENST00000518385 CABP4P57796 275 aa22.61■■□□□ 1.21
SDC2-202ENST00000518385 HEG1Q9ULI3 1381 aa22.6■■□□□ 1.21
SDC2-202ENST00000518385 SIRT2Q8IXJ6 389 aa22.6■■□□□ 1.21
SDC2-202ENST00000518385 UBE2Q2Q8WVN8 375 aa22.6■■□□□ 1.21
SDC2-202ENST00000518385 N4BP2Q86UW6 1770 aaPredicted RBP22.6■■□□□ 1.21
SDC2-202ENST00000518385 FKBP5Q13451 457 aaPredicted RBP22.59■■□□□ 1.21
SDC2-202ENST00000518385 DCTPP1Q9H773 170 aa22.59■■□□□ 1.21
SDC2-202ENST00000518385 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.59■■□□□ 1.21
SDC2-202ENST00000518385 GNAI3P08754 354 aa22.59■■□□□ 1.21
SDC2-202ENST00000518385 TRAK2O60296 914 aa22.58■■□□□ 1.2
SDC2-202ENST00000518385 HMMRO75330 724 aa22.58■■□□□ 1.2
SDC2-202ENST00000518385 CLCN1P35523 988 aa22.58■■□□□ 1.2
SDC2-202ENST00000518385 ZNF790Q6PG37 636 aa22.58■■□□□ 1.2
SDC2-202ENST00000518385 GBP4Q96PP9 640 aa22.58■■□□□ 1.2
SDC2-202ENST00000518385 C1orf115Q9H7X2 142 aa22.58■■□□□ 1.2
SDC2-202ENST00000518385 TNS2Q63HR2 1409 aa22.58■■□□□ 1.2
SDC2-202ENST00000518385 DDIT3P35638 169 aa22.57■■□□□ 1.2
SDC2-202ENST00000518385 DDB1Q16531 1140 aa22.57■■□□□ 1.2
SDC2-202ENST00000518385 ATP10DQ9P241 1426 aa22.57■■□□□ 1.2
SDC2-202ENST00000518385 AFF2P51816 1311 aa22.56■■□□□ 1.2
SDC2-202ENST00000518385 XRCC6P12956 609 aaKnown RBP eCLIP22.55■■□□□ 1.2
SDC2-202ENST00000518385 SLC39A6Q13433 755 aa22.55■■□□□ 1.2
SDC2-202ENST00000518385 BMP2KLQ5H9B9 411 aa22.55■■□□□ 1.2
SDC2-202ENST00000518385 ANKRD45Q5TZF3 282 aa22.55■■□□□ 1.2
SDC2-202ENST00000518385 CEP85Q6P2H3 762 aa22.55■■□□□ 1.2
SDC2-202ENST00000518385 SLC4A10Q6U841 1118 aa22.55■■□□□ 1.2
SDC2-202ENST00000518385 GNAI2P04899 355 aa22.55■■□□□ 1.2
SDC2-202ENST00000518385 MEIS3Q99687 375 aa22.55■■□□□ 1.2
SDC2-202ENST00000518385 DBF4Q9UBU7 674 aaPredicted RBP22.55■■□□□ 1.2
SDC2-202ENST00000518385 GIGYF1O75420 1035 aaPredicted RBP22.54■■□□□ 1.2
SDC2-202ENST00000518385 F6X3S4 739 aa22.53■■□□□ 1.2
SDC2-202ENST00000518385 MFAP1P55081 439 aaKnown RBP22.53■■□□□ 1.2
SDC2-202ENST00000518385 FAM98CQ17RN3 349 aaKnown RBP22.53■■□□□ 1.2
SDC2-202ENST00000518385 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.53■■□□□ 1.2
SDC2-202ENST00000518385 LNPKQ9C0E8 428 aa22.52■■□□□ 1.2
SDC2-202ENST00000518385 TTC5Q8N0Z6 440 aa22.51■■□□□ 1.19
SDC2-202ENST00000518385 EIF2S2P20042 333 aaKnown RBP22.5■■□□□ 1.19
SDC2-202ENST00000518385 MARCH10Q8NA82 808 aaPredicted RBP22.5■■□□□ 1.19
SDC2-202ENST00000518385 NECTIN2Q92692 538 aa22.5■■□□□ 1.19
SDC2-202ENST00000518385 GJD4Q96KN9 370 aaPredicted RBP22.5■■□□□ 1.19
SDC2-202ENST00000518385 TOGARAM1Q9Y4F4 1720 aa22.5■■□□□ 1.19
SDC2-202ENST00000518385 ZNF496Q96IT1 587 aaPredicted RBP22.5■■□□□ 1.19
SDC2-202ENST00000518385 HYPKQ9NX55 129 aa22.5■■□□□ 1.19
SDC2-202ENST00000518385 TMOD3Q9NYL9 352 aa22.5■■□□□ 1.19
SDC2-202ENST00000518385 TRPC5Q9UL62 973 aaPredicted RBP22.5■■□□□ 1.19
SDC2-202ENST00000518385 ATRNO75882 1429 aa22.49■■□□□ 1.19
SDC2-202ENST00000518385 IBTKQ9P2D0 1353 aaPredicted RBP22.49■■□□□ 1.19
SDC2-202ENST00000518385 FMNL2Q96PY5 1086 aa22.49■■□□□ 1.19
SDC2-202ENST00000518385 CHPF2Q9P2E5 772 aa22.49■■□□□ 1.19
SDC2-202ENST00000518385 CLEC17AQ6ZS10 378 aa22.48■■□□□ 1.19
SDC2-202ENST00000518385 PIGBQ92521 554 aa22.48■■□□□ 1.19
SDC2-202ENST00000518385 SRCIN1Q9C0H9 1055 aa22.48■■□□□ 1.19
SDC2-202ENST00000518385 RRAGDQ9NQL2 400 aaPredicted RBP22.48■■□□□ 1.19
SDC2-202ENST00000518385 PHAXQ9H814 394 aaKnown RBP22.47■■□□□ 1.19
SDC2-202ENST00000518385 SNRPA1P09661 255 aaKnown RBP22.46■■□□□ 1.19
SDC2-202ENST00000518385 RAB3GAP1Q15042 981 aa22.46■■□□□ 1.19
SDC2-202ENST00000518385 DNAAF4Q8WXU2 420 aa22.46■■□□□ 1.19
SDC2-202ENST00000518385 GRPEL1Q9HAV7 217 aa22.46■■□□□ 1.19
SDC2-202ENST00000518385 HDAC5Q9UQL6 1122 aa22.46■■□□□ 1.19
SDC2-202ENST00000518385 PRAMEF22A3QJZ6 481 aa22.46■■□□□ 1.19
SDC2-202ENST00000518385 ONECUT3O60422 494 aaPredicted RBP22.46■■□□□ 1.19
SDC2-202ENST00000518385 ATP8B2P98198 1209 aa22.46■■□□□ 1.19
SDC2-202ENST00000518385 ITGB4P16144 1822 aa22.45■■□□□ 1.18
SDC2-202ENST00000518385 GLI3P10071 1580 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms